RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 C11orf45Q8TAV5 145 aa6.93□□□□□ -1.3
SOX2-OT-244ENST00000627738 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
SOX2-OT-244ENST00000627738 TMEM141Q96I45 108 aa6.93□□□□□ -1.3
SOX2-OT-244ENST00000627738 TIMM17AQ99595 171 aa6.93□□□□□ -1.3
SOX2-OT-244ENST00000627738 NOTCH1P46531 2555 aa6.93□□□□□ -1.3
SOX2-OT-244ENST00000627738 A0A096LPF7 62 aa6.92□□□□□ -1.3
SOX2-OT-244ENST00000627738 S100A12P80511 92 aa6.92□□□□□ -1.3
SOX2-OT-244ENST00000627738 ATP6V0E2Q8NHE4 81 aa6.92□□□□□ -1.3
SOX2-OT-244ENST00000627738 OPRPNQ99935 248 aaPredicted RBP6.92□□□□□ -1.3
SOX2-OT-244ENST00000627738 B9D2Q9BPU9 175 aa6.92□□□□□ -1.3
SOX2-OT-244ENST00000627738 GTSF1LQ9H1H1 148 aa6.92□□□□□ -1.3
SOX2-OT-244ENST00000627738 MGAM2Q2M2H8 2515 aa6.92□□□□□ -1.3
SOX2-OT-244ENST00000627738 A0A087WX48 190 aa6.91□□□□□ -1.3
SOX2-OT-244ENST00000627738 TRAV12-1A0A0B4J245 112 aa6.91□□□□□ -1.3
SOX2-OT-244ENST00000627738 ZC2HC1BQ5TFG8 222 aa6.91□□□□□ -1.3
SOX2-OT-244ENST00000627738 CEMP1Q6PRD7 247 aaPredicted RBP6.91□□□□□ -1.3
SOX2-OT-244ENST00000627738 UBE2D4Q9Y2X8 147 aa6.91□□□□□ -1.3
SOX2-OT-244ENST00000627738 IGLV4-3A0A075B6K6 122 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 TRBV25-1A0A075B6N4 114 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 TRBV6-8A0A0A6YYG3 113 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 PRSS29PA6NIE9 313 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 MRPL23Q16540 153 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 TMEM97Q5BJF2 176 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 TMEM243Q9BU79 118 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 VAMP8Q9BV40 100 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 C1orf43Q9BWL3 253 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 SPANXA1Q9NS26 97 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 CHTOPQ9Y3Y2 248 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 PYGO1Q9Y3Y4 419 aa6.9□□□□□ -1.3
SOX2-OT-244ENST00000627738 DEFB131BA0A096LNP1 70 aa6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 UBE2L6O14933 153 aa6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 PMVKQ15126 192 aa6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 MAJINQ3KP22 176 aa6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 ZNF664Q8N3J9 261 aa6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 FAM104AQ969W3 186 aa6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 MRPL35Q9NZE8 188 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 PAM16Q9Y3D7 125 aa6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 ICOSQ9Y6W8 199 aa6.89□□□□□ -1.31
SOX2-OT-244ENST00000627738 TRAV9-2A0A087WT02 112 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 hDV102S1A0JD36 115 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 F8VRH5 84 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 DPM2O94777 84 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 IGKCP01834 107 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 FGF6P10767 208 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 DEFA6Q01524 100 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 GAGE6Q13070 117 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 SPATA45Q537H7 98 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 DGAT2L7PQ6IED9 249 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 CHCHD5Q9BSY4 110 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 VCX2Q9H322 139 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 PRO1933Q9H354 126 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 CST9LQ9H4G1 147 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 NBEAL1Q6ZS30 2694 aa6.88□□□□□ -1.31
SOX2-OT-244ENST00000627738 TRAV10A0A0B4J240 114 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 H3BNG1 76 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 H7C423 109 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 NPSP0C0P6 89 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 SMAGPQ0VAQ4 97 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 PAPPA-AS1Q5QFB9 102 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 AMMECR1LQ6DCA0 310 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 Q6ZUT4 128 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 SH2D6Q7Z4S9 175 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 MRPL52Q86TS9 123 aaKnown RBP6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 AMELXQ99217 191 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 TIMM21Q9BVV7 248 aa6.87□□□□□ -1.31
SOX2-OT-244ENST00000627738 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
SOX2-OT-244ENST00000627738 HSBP1L1C9JCN9 74 aa6.86□□□□□ -1.31
SOX2-OT-244ENST00000627738 PKIAP61925 76 aa6.86□□□□□ -1.31
SOX2-OT-244ENST00000627738 MRPS36P82909 103 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-244ENST00000627738 IGLV4-69A0A075B6H9 119 aa6.85□□□□□ -1.31
SOX2-OT-244ENST00000627738 NHLRC4P0CG21 123 aaPredicted RBP6.85□□□□□ -1.31
SOX2-OT-244ENST00000627738 PLNP26678 52 aa6.85□□□□□ -1.31
SOX2-OT-244ENST00000627738 STPG4Q8N801 248 aa6.85□□□□□ -1.31
SOX2-OT-244ENST00000627738 OR5A1Q8NGJ0 315 aa6.85□□□□□ -1.31
SOX2-OT-244ENST00000627738 TMEM101Q96IK0 257 aa6.85□□□□□ -1.31
SOX2-OT-244ENST00000627738 CSDC2Q9Y534 153 aaKnown RBP6.85□□□□□ -1.31
SOX2-OT-244ENST00000627738 TENM3Q9P273 2699 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 A0A0J9YXV3 536 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 C11orf86A6NJI1 115 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 TMEM262E9PQX1 116 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 ZNF25P17030 456 aaPredicted RBP6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 TCTAP57738 103 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 LELP1Q5T871 98 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 LYPD5Q6UWN5 251 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.31
SOX2-OT-244ENST00000627738 PRKDCP78527 4128 aaKnown RBP6.83□□□□□ -1.32
SOX2-OT-244ENST00000627738 IGLV4-60A0A075B6I1 120 aa6.83□□□□□ -1.32
SOX2-OT-244ENST00000627738 IGLC3P0DOY3 106 aa6.83□□□□□ -1.32
SOX2-OT-244ENST00000627738 UBE2D1P51668 147 aa6.82□□□□□ -1.32
SOX2-OT-244ENST00000627738 TIRAPP58753 221 aa6.82□□□□□ -1.32
SOX2-OT-244ENST00000627738 RBX1P62877 108 aa6.82□□□□□ -1.32
SOX2-OT-244ENST00000627738 MPV17L2Q567V2 206 aa6.82□□□□□ -1.32
SOX2-OT-244ENST00000627738 NFE4Q86UQ8 179 aa6.82□□□□□ -1.32
SOX2-OT-244ENST00000627738 C14orf144Q96I85 54 aa6.82□□□□□ -1.32
SOX2-OT-244ENST00000627738 CHAC1Q9BUX1 264 aa6.82□□□□□ -1.32
SOX2-OT-244ENST00000627738 DYNC2H1Q8NCM8 4307 aaKnown RBP6.81□□□□□ -1.32
SOX2-OT-244ENST00000627738 TRAV13-1A0A0B4J241 112 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms