RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.91□□□□□ -0.98
SOX2-OT-238ENST00000626299 PRSS47A8MTI9 375 aa8.91□□□□□ -0.98
SOX2-OT-238ENST00000626299 TCAPO15273 167 aa8.91□□□□□ -0.98
SOX2-OT-238ENST00000626299 KRTAP10-1P60331 282 aa8.91□□□□□ -0.98
SOX2-OT-238ENST00000626299 SVBPQ8N300 66 aa8.91□□□□□ -0.98
SOX2-OT-238ENST00000626299 TMEM101Q96IK0 257 aa8.91□□□□□ -0.98
SOX2-OT-238ENST00000626299 UBE2D4Q9Y2X8 147 aa8.91□□□□□ -0.98
SOX2-OT-238ENST00000626299 USP17L23D6RBM5 183 aa8.9□□□□□ -0.98
SOX2-OT-238ENST00000626299 NDUFA5Q16718 116 aa8.9□□□□□ -0.98
SOX2-OT-238ENST00000626299 CDC42SE2Q9NRR3 84 aa8.9□□□□□ -0.98
SOX2-OT-238ENST00000626299 LOC389332A0A1B0GUA5 103 aa8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 CDK2AP2O75956 126 aa8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 SNAPINO95295 136 aa8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 GCSHP23434 173 aa8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 RPL39P62891 51 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 KIAA1644Q3SXP7 199 aa8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 MAP1LC3AQ9H492 121 aa8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 CSDC2Q9Y534 153 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-238ENST00000626299 HERC2O95714 4834 aa8.88□□□□□ -0.99
SOX2-OT-238ENST00000626299 SLC7A5P1Q8MH63 180 aa8.88□□□□□ -0.99
SOX2-OT-238ENST00000626299 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
SOX2-OT-238ENST00000626299 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
SOX2-OT-238ENST00000626299 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
SOX2-OT-238ENST00000626299 TGIF2-C20orf24A0A0A6YYL0 155 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 GAGE12HA6NDE8 117 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 PRSS1P07477 247 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 RNASE13Q5GAN3 156 aaKnown RBP8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 Q6ZUT4 128 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 TMEM18Q96B42 140 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 TIMM21Q9BVV7 248 aa8.87□□□□□ -0.99
SOX2-OT-238ENST00000626299 RAB5AP20339 215 aa8.86□□□□□ -0.99
SOX2-OT-238ENST00000626299 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
SOX2-OT-238ENST00000626299 Q8N8P6 123 aa8.86□□□□□ -0.99
SOX2-OT-238ENST00000626299 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
SOX2-OT-238ENST00000626299 MT-ND6P03923 174 aa8.85□□□□□ -0.99
SOX2-OT-238ENST00000626299 XCL1P47992 114 aa8.85□□□□□ -0.99
SOX2-OT-238ENST00000626299 FOXI1Q12951 378 aa8.85□□□□□ -0.99
SOX2-OT-238ENST00000626299 COX19Q49B96 90 aa8.85□□□□□ -0.99
SOX2-OT-238ENST00000626299 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
SOX2-OT-238ENST00000626299 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
SOX2-OT-238ENST00000626299 RYR1P21817 5038 aa8.85□□□□□ -0.99
SOX2-OT-238ENST00000626299 CCL25O15444 150 aa8.84□□□□□ -0.99
SOX2-OT-238ENST00000626299 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-238ENST00000626299 OPRPNQ99935 248 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-238ENST00000626299 ALKBH7Q9BT30 221 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-238ENST00000626299 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
SOX2-OT-238ENST00000626299 MRPL18Q9H0U6 180 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-238ENST00000626299 NXT2Q9NPJ8 142 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-238ENST00000626299 APOBP04114 4563 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-238ENST00000626299 XGP55808 180 aa8.83□□□□□ -1
SOX2-OT-238ENST00000626299 SS18Q15532 418 aa8.83□□□□□ -1
SOX2-OT-238ENST00000626299 C15orf56Q8N910 161 aa8.83□□□□□ -1
SOX2-OT-238ENST00000626299 YPEL4Q96NS1 127 aa8.83□□□□□ -1
SOX2-OT-238ENST00000626299 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
SOX2-OT-238ENST00000626299 hDV102S1A0JD36 115 aa8.82□□□□□ -1
SOX2-OT-238ENST00000626299 MRPS36P82909 103 aaKnown RBP8.82□□□□□ -1
SOX2-OT-238ENST00000626299 FABP9Q0Z7S8 132 aa8.82□□□□□ -1
SOX2-OT-238ENST00000626299 ORMDL2Q53FV1 153 aa8.82□□□□□ -1
SOX2-OT-238ENST00000626299 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
SOX2-OT-238ENST00000626299 HSPG2P98160 4391 aa8.82□□□□□ -1
SOX2-OT-238ENST00000626299 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
SOX2-OT-238ENST00000626299 K7EMI3 77 aa8.81□□□□□ -1
SOX2-OT-238ENST00000626299 HAMPP81172 84 aa8.81□□□□□ -1
SOX2-OT-238ENST00000626299 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
SOX2-OT-238ENST00000626299 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
SOX2-OT-238ENST00000626299 PYGO1Q9Y3Y4 419 aa8.81□□□□□ -1
SOX2-OT-238ENST00000626299 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
SOX2-OT-238ENST00000626299 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
SOX2-OT-238ENST00000626299 Q6ZSA8 131 aa8.8□□□□□ -1
SOX2-OT-238ENST00000626299 CBLN2Q8IUK8 224 aa8.8□□□□□ -1
SOX2-OT-238ENST00000626299 CYSLTR1Q9Y271 337 aa8.8□□□□□ -1
SOX2-OT-238ENST00000626299 TRAPPC1Q9Y5R8 145 aa8.8□□□□□ -1
SOX2-OT-238ENST00000626299 LINC01546A6NGU7 62 aa8.79□□□□□ -1
SOX2-OT-238ENST00000626299 SLPIP03973 132 aa8.79□□□□□ -1
SOX2-OT-238ENST00000626299 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
SOX2-OT-238ENST00000626299 HIGD2BQ4VC39 106 aa8.79□□□□□ -1
SOX2-OT-238ENST00000626299 CFAP161Q6P656 301 aa8.79□□□□□ -1
SOX2-OT-238ENST00000626299 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
SOX2-OT-238ENST00000626299 PRSS3P2Q8NHM4 247 aa8.79□□□□□ -1
SOX2-OT-238ENST00000626299 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
SOX2-OT-238ENST00000626299 IFITM10A6NMD0 228 aa8.78□□□□□ -1
SOX2-OT-238ENST00000626299 J3QL48 77 aa8.78□□□□□ -1
SOX2-OT-238ENST00000626299 IGIPA6NJ69 53 aa8.77□□□□□ -1.01
SOX2-OT-238ENST00000626299 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
SOX2-OT-238ENST00000626299 TMEM141Q96I45 108 aa8.77□□□□□ -1.01
SOX2-OT-238ENST00000626299 SMCO4Q9NRQ5 59 aa8.77□□□□□ -1.01
SOX2-OT-238ENST00000626299 IGHV1-58A0A0C4DH39 117 aa8.76□□□□□ -1.01
SOX2-OT-238ENST00000626299 COX7A2LO14548 114 aa8.76□□□□□ -1.01
SOX2-OT-238ENST00000626299 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
SOX2-OT-238ENST00000626299 LINC00173Q6ZV60 143 aa8.76□□□□□ -1.01
SOX2-OT-238ENST00000626299 Q8N1X5 172 aa8.76□□□□□ -1.01
SOX2-OT-238ENST00000626299 TOMM6Q96B49 74 aa8.76□□□□□ -1.01
SOX2-OT-238ENST00000626299 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
SOX2-OT-238ENST00000626299 AP5S1Q9NUS5 200 aa8.76□□□□□ -1.01
SOX2-OT-238ENST00000626299 FA2HQ7L5A8 372 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms