RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 TRBV27A0A0K0K1C4 114 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 A0A1B0GVY2 172 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 H7C423 109 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 LECT2O14960 151 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 TCAPO15273 167 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 TSHBP01222 138 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 NPYP01303 97 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 FGF6P10767 208 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 NRACQ8N912 160 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 SMIM2Q9BVW6 85 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 CSMD3Q7Z407 3707 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 DNAH7Q8WXX0 4024 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 IGLV4-60A0A075B6I1 120 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 LOC389332A0A1B0GUA5 103 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 PHOX2AO14813 284 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 POLR2KP53803 58 aaKnown RBP4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 COX19Q49B96 90 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 C10orf91Q5T1B1 145 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 ENHOQ6UWT2 76 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 BAALCQ8WXS3 180 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 LAMTOR2Q9Y2Q5 125 aa4.82□□□□□ -1.64
NPLOC4-221ENST00000625705 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.81□□□□□ -1.64
NPLOC4-221ENST00000625705 TRBV24-1A0A075B6N3 115 aa4.81□□□□□ -1.64
NPLOC4-221ENST00000625705 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
NPLOC4-221ENST00000625705 TRAV8-4A0A0B4J246 113 aa4.81□□□□□ -1.64
NPLOC4-221ENST00000625705 C14orf177Q52M58 125 aa4.81□□□□□ -1.64
NPLOC4-221ENST00000625705 C20orf203Q8NBC4 194 aa4.81□□□□□ -1.64
NPLOC4-221ENST00000625705 TMA7Q9Y2S6 64 aaKnown RBP4.81□□□□□ -1.64
NPLOC4-221ENST00000625705 MT-ND6P03923 174 aa4.8□□□□□ -1.64
NPLOC4-221ENST00000625705 FUSP35637 526 aaKnown RBP eCLIP4.8□□□□□ -1.64
NPLOC4-221ENST00000625705 RPL32P62910 135 aaKnown RBP4.8□□□□□ -1.64
NPLOC4-221ENST00000625705 KIAA1644Q3SXP7 199 aa4.8□□□□□ -1.64
NPLOC4-221ENST00000625705 SLC7A5P1Q8MH63 180 aa4.8□□□□□ -1.64
NPLOC4-221ENST00000625705 Q8N814 137 aa4.8□□□□□ -1.64
NPLOC4-221ENST00000625705 PRR34Q9NV39 138 aa4.8□□□□□ -1.64
NPLOC4-221ENST00000625705 LRCOL1A6NCL2 159 aa4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 ESDP10768 282 aa4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 IFI27P40305 119 aaPredicted RBP4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 FABP9Q0Z7S8 132 aa4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 SS18Q15532 418 aa4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 PRSS3P2Q8NHM4 247 aa4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 NTN5Q8WTR8 489 aaPredicted RBP4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 GNB1LQ9BYB4 327 aa4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 NXT2Q9NPJ8 142 aaKnown RBP4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 SMCO4Q9NRQ5 59 aa4.79□□□□□ -1.64
NPLOC4-221ENST00000625705 TGIF2-C20orf24A0A0A6YYL0 155 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 GAGE12HA6NDE8 117 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 USP17L23D6RBM5 183 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 XCL1P47992 114 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 RPL39P62891 51 aaKnown RBP4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 ORMDL2Q53FV1 153 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 RNASE13Q5GAN3 156 aaKnown RBP4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 Q6ZN92 141 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 MRPL52Q86TS9 123 aaKnown RBP4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 ZNF664Q8N3J9 261 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 Q8N8P6 123 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 CHCHD10Q8WYQ3 142 aaPredicted RBP4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 SPANXA1Q9NS26 97 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 CYSLTR1Q9Y271 337 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 TRAPPC1Q9Y5R8 145 aa4.78□□□□□ -1.64
NPLOC4-221ENST00000625705 TRAV13-1A0A0B4J241 112 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 hDV102S1A0JD36 115 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 CCL25O15444 150 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 GCSHP23434 173 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 G0S2P27469 103 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 WFDC2Q14508 124 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 CFAP161Q6P656 301 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 Q6ZUT4 128 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 FA2HQ7L5A8 372 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 MAPKAPK5-AS1Q8N8E1 139 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 TIMM21Q9BVV7 248 aa4.77□□□□□ -1.65
NPLOC4-221ENST00000625705 KMT2CQ8NEZ4 4911 aaKnown RBP4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 LINC00959A0A1B0GUT2 108 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 IFITM10A6NMD0 228 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 K7EMI3 77 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 MALP21145 153 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 C2orf66Q6UXQ4 117 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 CBLN2Q8IUK8 224 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 C2orf88Q9BSF0 95 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 CDC42SE2Q9NRR3 84 aa4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 CSDC2Q9Y534 153 aaKnown RBP4.76□□□□□ -1.65
NPLOC4-221ENST00000625705 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.75□□□□□ -1.65
NPLOC4-221ENST00000625705 C1orf196B1AJZ1 125 aa4.75□□□□□ -1.65
NPLOC4-221ENST00000625705 TEX43Q6ZNM6 134 aa4.75□□□□□ -1.65
NPLOC4-221ENST00000625705 TMEM141Q96I45 108 aa4.75□□□□□ -1.65
NPLOC4-221ENST00000625705 ALKBH7Q9BT30 221 aaPredicted RBP4.75□□□□□ -1.65
NPLOC4-221ENST00000625705 DYNC2H1Q8NCM8 4307 aaKnown RBP4.74□□□□□ -1.65
NPLOC4-221ENST00000625705 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
NPLOC4-221ENST00000625705 PRSS47A8MTI9 375 aa4.74□□□□□ -1.65
NPLOC4-221ENST00000625705 COX7A2LO14548 114 aa4.74□□□□□ -1.65
NPLOC4-221ENST00000625705 HIGD2BQ4VC39 106 aa4.74□□□□□ -1.65
NPLOC4-221ENST00000625705 PAPPA-AS1Q5QFB9 102 aa4.74□□□□□ -1.65
NPLOC4-221ENST00000625705 OPRPNQ99935 248 aaPredicted RBP4.74□□□□□ -1.65
NPLOC4-221ENST00000625705 IGHV1-58A0A0C4DH39 117 aa4.73□□□□□ -1.65
NPLOC4-221ENST00000625705 LINC01549A6NIU2 74 aa4.73□□□□□ -1.65
NPLOC4-221ENST00000625705 APOMO95445 188 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms