RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
PNKP-217ENST00000625216 TOMM6Q96B49 74 aa8.6□□□□□ -1.03
PNKP-217ENST00000625216 KRTAP17-1Q9BYP8 105 aa8.6□□□□□ -1.03
PNKP-217ENST00000625216 C16orf90A8MZG2 172 aa8.59□□□□□ -1.03
PNKP-217ENST00000625216 NFE4Q86UQ8 179 aa8.59□□□□□ -1.03
PNKP-217ENST00000625216 C20orf203Q8NBC4 194 aa8.59□□□□□ -1.03
PNKP-217ENST00000625216 ATP6V0E2Q8NHE4 81 aa8.59□□□□□ -1.03
PNKP-217ENST00000625216 CYSLTR1Q9Y271 337 aa8.59□□□□□ -1.03
PNKP-217ENST00000625216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
PNKP-217ENST00000625216 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
PNKP-217ENST00000625216 C3orf79P0CE67 100 aa8.58□□□□□ -1.04
PNKP-217ENST00000625216 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
PNKP-217ENST00000625216 HSPB8Q9UJY1 196 aa8.58□□□□□ -1.04
PNKP-217ENST00000625216 DNAH10OSP0CZ25 163 aa8.57□□□□□ -1.04
PNKP-217ENST00000625216 KRTDAPP60985 99 aa8.57□□□□□ -1.04
PNKP-217ENST00000625216 SPATA12Q7Z6I5 190 aa8.57□□□□□ -1.04
PNKP-217ENST00000625216 DNAH5Q8TE73 4624 aa8.57□□□□□ -1.04
PNKP-217ENST00000625216 TRBV6-8A0A0A6YYG3 113 aa8.56□□□□□ -1.04
PNKP-217ENST00000625216 Q6ZRN7 208 aaPredicted RBP8.56□□□□□ -1.04
PNKP-217ENST00000625216 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
PNKP-217ENST00000625216 Q8N976 141 aa8.56□□□□□ -1.04
PNKP-217ENST00000625216 IFI27L1Q96BM0 104 aa8.56□□□□□ -1.04
PNKP-217ENST00000625216 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
PNKP-217ENST00000625216 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
PNKP-217ENST00000625216 HSPG2P98160 4391 aa8.55□□□□□ -1.04
PNKP-217ENST00000625216 IGIPA6NJ69 53 aa8.55□□□□□ -1.04
PNKP-217ENST00000625216 CDK2AP2O75956 126 aa8.55□□□□□ -1.04
PNKP-217ENST00000625216 PYY3Q5JQD4 70 aa8.55□□□□□ -1.04
PNKP-217ENST00000625216 WFDC10BQ8IUB3 73 aa8.55□□□□□ -1.04
PNKP-217ENST00000625216 TMEM243Q9BU79 118 aa8.55□□□□□ -1.04
PNKP-217ENST00000625216 UBE2D4Q9Y2X8 147 aa8.55□□□□□ -1.04
PNKP-217ENST00000625216 TRBV25-1A0A075B6N4 114 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 SYS1-DBNDD2H3BUS1 97 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 EREGO14944 169 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 ATP5LO75964 103 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 G0S2P27469 103 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 TMEM97Q5BJF2 176 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 ERASQ7Z444 233 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 FAM104AQ969W3 186 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 MAP1LC3CQ9BXW4 147 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 PGPEP1Q9NXJ5 209 aa8.54□□□□□ -1.04
PNKP-217ENST00000625216 APOBP04114 4563 aaKnown RBP8.53□□□□□ -1.04
PNKP-217ENST00000625216 TRAV8-6A0A0B4J262 113 aa8.53□□□□□ -1.04
PNKP-217ENST00000625216 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
PNKP-217ENST00000625216 H0Y8G0 127 aa8.53□□□□□ -1.04
PNKP-217ENST00000625216 JOSD1Q15040 202 aaPredicted RBP8.53□□□□□ -1.04
PNKP-217ENST00000625216 CDPF1Q6NVV7 123 aa8.53□□□□□ -1.04
PNKP-217ENST00000625216 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
PNKP-217ENST00000625216 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
PNKP-217ENST00000625216 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.52□□□□□ -1.05
PNKP-217ENST00000625216 FGF6P10767 208 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 GAGE6Q13070 117 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 LINC01556Q5JQF7 62 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 ZC2HC1BQ5TFG8 222 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 Q6ZUT4 128 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 TMEM141Q96I45 108 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 SPANXA1Q9NS26 97 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 PYGO1Q9Y3Y4 419 aa8.52□□□□□ -1.05
PNKP-217ENST00000625216 KRTAP10-2P60368 255 aa8.51□□□□□ -1.05
PNKP-217ENST00000625216 LELP1Q5T871 98 aa8.51□□□□□ -1.05
PNKP-217ENST00000625216 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
PNKP-217ENST00000625216 MRPL52Q86TS9 123 aaKnown RBP8.51□□□□□ -1.05
PNKP-217ENST00000625216 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
PNKP-217ENST00000625216 H7C423 109 aa8.5□□□□□ -1.05
PNKP-217ENST00000625216 UBE2L6O14933 153 aa8.5□□□□□ -1.05
PNKP-217ENST00000625216 SMIM6P0DI80 62 aa8.5□□□□□ -1.05
PNKP-217ENST00000625216 ODF1Q14990 250 aa8.5□□□□□ -1.05
PNKP-217ENST00000625216 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
PNKP-217ENST00000625216 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
PNKP-217ENST00000625216 Q6ZN92 141 aa8.5□□□□□ -1.05
PNKP-217ENST00000625216 PMCHL2Q9BQD1 86 aa8.5□□□□□ -1.05
PNKP-217ENST00000625216 TRAV12-1A0A0B4J245 112 aa8.49□□□□□ -1.05
PNKP-217ENST00000625216 IBA57-AS1B1ANH7 110 aa8.49□□□□□ -1.05
PNKP-217ENST00000625216 SCGB1D1O95968 90 aa8.49□□□□□ -1.05
PNKP-217ENST00000625216 PRSS1P07477 247 aa8.49□□□□□ -1.05
PNKP-217ENST00000625216 IGLV4-60A0A075B6I1 120 aa8.48□□□□□ -1.05
PNKP-217ENST00000625216 A0A087WTM6 91 aa8.48□□□□□ -1.05
PNKP-217ENST00000625216 NPSP0C0P6 89 aa8.48□□□□□ -1.05
PNKP-217ENST00000625216 MRPS36P82909 103 aaKnown RBP8.48□□□□□ -1.05
PNKP-217ENST00000625216 MPV17L2Q567V2 206 aa8.48□□□□□ -1.05
PNKP-217ENST00000625216 AMMECR1LQ6DCA0 310 aa8.48□□□□□ -1.05
PNKP-217ENST00000625216 Q8N3U1 123 aa8.48□□□□□ -1.05
PNKP-217ENST00000625216 AMELXQ99217 191 aa8.48□□□□□ -1.05
PNKP-217ENST00000625216 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
PNKP-217ENST00000625216 ABCA13Q86UQ4 5058 aa8.48□□□□□ -1.05
PNKP-217ENST00000625216 A0A087WX48 190 aa8.47□□□□□ -1.05
PNKP-217ENST00000625216 C20orf202A1L168 122 aa8.47□□□□□ -1.05
PNKP-217ENST00000625216 ZNF25P17030 456 aaPredicted RBP8.47□□□□□ -1.05
PNKP-217ENST00000625216 PMVKQ15126 192 aa8.47□□□□□ -1.05
PNKP-217ENST00000625216 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
PNKP-217ENST00000625216 OR5A1Q8NGJ0 315 aa8.47□□□□□ -1.05
PNKP-217ENST00000625216 CST9LQ9H4G1 147 aa8.47□□□□□ -1.05
PNKP-217ENST00000625216 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
PNKP-217ENST00000625216 RBX1P62877 108 aa8.46□□□□□ -1.06
PNKP-217ENST00000625216 SMAGPQ0VAQ4 97 aa8.46□□□□□ -1.06
PNKP-217ENST00000625216 DGAT2L7PQ6IED9 249 aa8.46□□□□□ -1.06
PNKP-217ENST00000625216 TEX43Q6ZNM6 134 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms