RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 RYR2Q92736 4967 aa8.14□□□□□ -1.11
LINC00963-220ENST00000625171 F8VRH5 84 aa8.13□□□□□ -1.11
LINC00963-220ENST00000625171 FGF6P10767 208 aa8.13□□□□□ -1.11
LINC00963-220ENST00000625171 S100A12P80511 92 aa8.13□□□□□ -1.11
LINC00963-220ENST00000625171 VCX2Q9H322 139 aa8.13□□□□□ -1.11
LINC00963-220ENST00000625171 CDC42SE2Q9NRR3 84 aa8.13□□□□□ -1.11
LINC00963-220ENST00000625171 TENM2Q9NT68 2774 aa8.13□□□□□ -1.11
LINC00963-220ENST00000625171 DNAH1Q9P2D7 4330 aa8.12□□□□□ -1.11
LINC00963-220ENST00000625171 SACSQ9NZJ4 4579 aa8.12□□□□□ -1.11
LINC00963-220ENST00000625171 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.12□□□□□ -1.11
LINC00963-220ENST00000625171 TRAV9-2A0A087WT02 112 aa8.12□□□□□ -1.11
LINC00963-220ENST00000625171 IGKV2-29A2NJV5 120 aaPredicted RBP8.12□□□□□ -1.11
LINC00963-220ENST00000625171 HTN3P15516 51 aa8.12□□□□□ -1.11
LINC00963-220ENST00000625171 PLNP26678 52 aa8.12□□□□□ -1.11
LINC00963-220ENST00000625171 LYPD5Q6UWN5 251 aa8.12□□□□□ -1.11
LINC00963-220ENST00000625171 UBE2L6O14933 153 aa8.11□□□□□ -1.11
LINC00963-220ENST00000625171 DPM2O94777 84 aa8.11□□□□□ -1.11
LINC00963-220ENST00000625171 DGAT2L7PQ6IED9 249 aa8.11□□□□□ -1.11
LINC00963-220ENST00000625171 NFE4Q86UQ8 179 aa8.11□□□□□ -1.11
LINC00963-220ENST00000625171 ZNF664Q8N3J9 261 aa8.11□□□□□ -1.11
LINC00963-220ENST00000625171 DEFB104AQ8WTQ1 72 aa8.11□□□□□ -1.11
LINC00963-220ENST00000625171 CHTOPQ9Y3Y2 248 aaKnown RBP8.11□□□□□ -1.11
LINC00963-220ENST00000625171 CCL25O15444 150 aa8.1□□□□□ -1.11
LINC00963-220ENST00000625171 IGKCP01834 107 aa8.1□□□□□ -1.11
LINC00963-220ENST00000625171 CASC10Q5T4H9 136 aa8.1□□□□□ -1.11
LINC00963-220ENST00000625171 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
LINC00963-220ENST00000625171 MUC7Q8TAX7 377 aa8.1□□□□□ -1.11
LINC00963-220ENST00000625171 TMEM101Q96IK0 257 aa8.1□□□□□ -1.11
LINC00963-220ENST00000625171 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
LINC00963-220ENST00000625171 IGLC3P0DOY3 106 aa8.09□□□□□ -1.11
LINC00963-220ENST00000625171 TCTAP57738 103 aa8.09□□□□□ -1.11
LINC00963-220ENST00000625171 SEC11AP67812 179 aa8.09□□□□□ -1.11
LINC00963-220ENST00000625171 AMMECR1LQ6DCA0 310 aa8.09□□□□□ -1.11
LINC00963-220ENST00000625171 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
LINC00963-220ENST00000625171 CHCHD5Q9BSY4 110 aa8.09□□□□□ -1.11
LINC00963-220ENST00000625171 IGLV4-69A0A075B6H9 119 aa8.08□□□□□ -1.12
LINC00963-220ENST00000625171 CEMP1Q6PRD7 247 aaPredicted RBP8.08□□□□□ -1.12
LINC00963-220ENST00000625171 OPRPNQ99935 248 aaPredicted RBP8.08□□□□□ -1.12
LINC00963-220ENST00000625171 C2orf88Q9BSF0 95 aa8.08□□□□□ -1.12
LINC00963-220ENST00000625171 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
LINC00963-220ENST00000625171 DNAH7Q8WXX0 4024 aa8.08□□□□□ -1.12
LINC00963-220ENST00000625171 TRAV8-6A0A0B4J262 113 aa8.07□□□□□ -1.12
LINC00963-220ENST00000625171 LCE6AA0A183 80 aa8.07□□□□□ -1.12
LINC00963-220ENST00000625171 TINCRA0A1B0GVN0 87 aa8.07□□□□□ -1.12
LINC00963-220ENST00000625171 UBE2D1P51668 147 aa8.07□□□□□ -1.12
LINC00963-220ENST00000625171 Q6ZUT4 128 aa8.07□□□□□ -1.12
LINC00963-220ENST00000625171 IGLV5-45A0A087WSX0 123 aa8.06□□□□□ -1.12
LINC00963-220ENST00000625171 C11orf86A6NJI1 115 aa8.06□□□□□ -1.12
LINC00963-220ENST00000625171 HSBP1L1C9JCN9 74 aa8.06□□□□□ -1.12
LINC00963-220ENST00000625171 H0Y8G0 127 aa8.06□□□□□ -1.12
LINC00963-220ENST00000625171 RBX1P62877 108 aa8.06□□□□□ -1.12
LINC00963-220ENST00000625171 ESRGQ1W209 222 aa8.06□□□□□ -1.12
LINC00963-220ENST00000625171 LYSTQ99698 3801 aa8.06□□□□□ -1.12
LINC00963-220ENST00000625171 IGLV4-60A0A075B6I1 120 aa8.05□□□□□ -1.12
LINC00963-220ENST00000625171 GAGE6Q13070 117 aa8.05□□□□□ -1.12
LINC00963-220ENST00000625171 PMCHL2Q9BQD1 86 aa8.05□□□□□ -1.12
LINC00963-220ENST00000625171 K7EP13 123 aa8.04□□□□□ -1.12
LINC00963-220ENST00000625171 HERVK_113P63121 156 aa8.04□□□□□ -1.12
LINC00963-220ENST00000625171 MPV17L2Q567V2 206 aa8.04□□□□□ -1.12
LINC00963-220ENST00000625171 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
LINC00963-220ENST00000625171 PRR34Q9NV39 138 aa8.04□□□□□ -1.12
LINC00963-220ENST00000625171 NUPR2A6NF83 97 aa8.03□□□□□ -1.12
LINC00963-220ENST00000625171 TMEM262E9PQX1 116 aa8.03□□□□□ -1.12
LINC00963-220ENST00000625171 DLEU1O43261 78 aa8.03□□□□□ -1.12
LINC00963-220ENST00000625171 SPATA45Q537H7 98 aa8.03□□□□□ -1.12
LINC00963-220ENST00000625171 LINC00242Q5T6M2 205 aa8.03□□□□□ -1.12
LINC00963-220ENST00000625171 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
LINC00963-220ENST00000625171 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
LINC00963-220ENST00000625171 MRPS16Q9Y3D3 137 aaKnown RBP8.03□□□□□ -1.12
LINC00963-220ENST00000625171 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 hDV102S1A0JD36 115 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 E9PLD3 99 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 TSTD3H0UI37 97 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 CCL18P55774 89 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 KLK5Q9Y337 293 aaPredicted RBP8.02□□□□□ -1.13
LINC00963-220ENST00000625171 PAM16Q9Y3D7 125 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 CSMD3Q7Z407 3707 aa8.02□□□□□ -1.13
LINC00963-220ENST00000625171 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
LINC00963-220ENST00000625171 IGLL5B9A064 214 aa8.01□□□□□ -1.13
LINC00963-220ENST00000625171 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
LINC00963-220ENST00000625171 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
LINC00963-220ENST00000625171 MAJINQ3KP22 176 aa8.01□□□□□ -1.13
LINC00963-220ENST00000625171 STPG4Q8N801 248 aa8.01□□□□□ -1.13
LINC00963-220ENST00000625171 CHAC1Q9BUX1 264 aa8.01□□□□□ -1.13
LINC00963-220ENST00000625171 TMEM223A0PJW6 202 aa8□□□□□ -1.13
LINC00963-220ENST00000625171 COX8AP10176 69 aa8□□□□□ -1.13
LINC00963-220ENST00000625171 HERVK_113P61574 105 aa8□□□□□ -1.13
LINC00963-220ENST00000625171 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
LINC00963-220ENST00000625171 MIEN1Q9BRT3 115 aa8□□□□□ -1.13
LINC00963-220ENST00000625171 GEMIN7Q9H840 131 aaKnown RBP8□□□□□ -1.13
LINC00963-220ENST00000625171 TRAV8-4A0A0B4J246 113 aa7.99□□□□□ -1.13
LINC00963-220ENST00000625171 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
LINC00963-220ENST00000625171 H3BRM9 83 aa7.99□□□□□ -1.13
LINC00963-220ENST00000625171 SS18Q15532 418 aa7.99□□□□□ -1.13
LINC00963-220ENST00000625171 RNASE13Q5GAN3 156 aaKnown RBP7.99□□□□□ -1.13
LINC00963-220ENST00000625171 BOD1L2Q8IYS8 172 aa7.99□□□□□ -1.13
LINC00963-220ENST00000625171 UQCR10Q9UDW1 63 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms