RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
LINC01560-202ENST00000624822 C1orf43Q9BWL3 253 aa6.39□□□□□ -1.39
LINC01560-202ENST00000624822 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
LINC01560-202ENST00000624822 IGLV4-60A0A075B6I1 120 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 TRBV24-1A0A075B6N3 115 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 IGKV3OR2-268A0A0C4DH90 116 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 H7C423 109 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 REG3AQ06141 175 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 ENHOQ6UWT2 76 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 C20orf203Q8NBC4 194 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 TMEM101Q96IK0 257 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 SMCO4Q9NRQ5 59 aa6.38□□□□□ -1.39
LINC01560-202ENST00000624822 IGLV10-54A0A075B6I4 117 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 A0A087WTM6 91 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 LOC389332A0A1B0GUA5 103 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 A0A1B0GUV1 79 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 PHOX2AO14813 284 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 HLA-DQA1P01909 254 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 FGF6P10767 208 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 MIAQ16674 131 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 MAP1LC3AQ9H492 121 aa6.37□□□□□ -1.39
LINC01560-202ENST00000624822 FAT2Q9NYQ8 4349 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 C16orf90A8MZG2 172 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 LECT2O14960 151 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 TCAPO15273 167 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 ESDP10768 282 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 ZNF25P17030 456 aaPredicted RBP6.36□□□□□ -1.39
LINC01560-202ENST00000624822 RAB5AP20339 215 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 COX19Q49B96 90 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 DGAT2L7PQ6IED9 249 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 TMEM18Q96B42 140 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 LAMTOR2Q9Y2Q5 125 aa6.36□□□□□ -1.39
LINC01560-202ENST00000624822 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
LINC01560-202ENST00000624822 TGIF2-C20orf24A0A0A6YYL0 155 aa6.35□□□□□ -1.39
LINC01560-202ENST00000624822 FUSP35637 526 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC01560-202ENST00000624822 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
LINC01560-202ENST00000624822 RPL32P62910 135 aaKnown RBP6.35□□□□□ -1.39
LINC01560-202ENST00000624822 SMAGPQ0VAQ4 97 aa6.35□□□□□ -1.39
LINC01560-202ENST00000624822 OR5A1Q8NGJ0 315 aa6.35□□□□□ -1.39
LINC01560-202ENST00000624822 BAALCQ8WXS3 180 aa6.35□□□□□ -1.39
LINC01560-202ENST00000624822 GNB1LQ9BYB4 327 aa6.35□□□□□ -1.39
LINC01560-202ENST00000624822 PRR34Q9NV39 138 aa6.35□□□□□ -1.39
LINC01560-202ENST00000624822 PKD1P98161 4303 aa6.34□□□□□ -1.39
LINC01560-202ENST00000624822 LRCOL1A6NCL2 159 aa6.34□□□□□ -1.39
LINC01560-202ENST00000624822 MT-ND6P03923 174 aa6.34□□□□□ -1.39
LINC01560-202ENST00000624822 Q8N814 137 aa6.34□□□□□ -1.39
LINC01560-202ENST00000624822 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.33□□□□□ -1.4
LINC01560-202ENST00000624822 TRAV8-4A0A0B4J246 113 aa6.33□□□□□ -1.4
LINC01560-202ENST00000624822 FABP9Q0Z7S8 132 aa6.33□□□□□ -1.4
LINC01560-202ENST00000624822 ANKRD39Q53RE8 183 aa6.33□□□□□ -1.4
LINC01560-202ENST00000624822 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
LINC01560-202ENST00000624822 HECTD4Q9Y4D8 3996 aa6.33□□□□□ -1.4
LINC01560-202ENST00000624822 IGLV5-52A0A0A0MRZ9 124 aa6.32□□□□□ -1.4
LINC01560-202ENST00000624822 COLCA2A8K830 154 aa6.32□□□□□ -1.4
LINC01560-202ENST00000624822 RPL39P62891 51 aaKnown RBP6.32□□□□□ -1.4
LINC01560-202ENST00000624822 WFDC2Q14508 124 aa6.32□□□□□ -1.4
LINC01560-202ENST00000624822 RNASE13Q5GAN3 156 aaKnown RBP6.32□□□□□ -1.4
LINC01560-202ENST00000624822 MRPL52Q86TS9 123 aaKnown RBP6.32□□□□□ -1.4
LINC01560-202ENST00000624822 ZNF664Q8N3J9 261 aa6.32□□□□□ -1.4
LINC01560-202ENST00000624822 Q8N8P6 123 aa6.32□□□□□ -1.4
LINC01560-202ENST00000624822 UBE2D4Q9Y2X8 147 aa6.32□□□□□ -1.4
LINC01560-202ENST00000624822 TRAPPC1Q9Y5R8 145 aa6.32□□□□□ -1.4
LINC01560-202ENST00000624822 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
LINC01560-202ENST00000624822 IFI27P40305 119 aaPredicted RBP6.31□□□□□ -1.4
LINC01560-202ENST00000624822 SS18Q15532 418 aa6.31□□□□□ -1.4
LINC01560-202ENST00000624822 PRSS3P2Q8NHM4 247 aa6.31□□□□□ -1.4
LINC01560-202ENST00000624822 NXT2Q9NPJ8 142 aaKnown RBP6.31□□□□□ -1.4
LINC01560-202ENST00000624822 CDC42SE2Q9NRR3 84 aa6.31□□□□□ -1.4
LINC01560-202ENST00000624822 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
LINC01560-202ENST00000624822 USP17L23D6RBM5 183 aa6.3□□□□□ -1.4
LINC01560-202ENST00000624822 C14orf177Q52M58 125 aa6.3□□□□□ -1.4
LINC01560-202ENST00000624822 ORMDL2Q53FV1 153 aa6.3□□□□□ -1.4
LINC01560-202ENST00000624822 Q6ZUT4 128 aa6.3□□□□□ -1.4
LINC01560-202ENST00000624822 NTN5Q8WTR8 489 aaPredicted RBP6.3□□□□□ -1.4
LINC01560-202ENST00000624822 CHCHD10Q8WYQ3 142 aaPredicted RBP6.3□□□□□ -1.4
LINC01560-202ENST00000624822 ALKBH7Q9BT30 221 aaPredicted RBP6.3□□□□□ -1.4
LINC01560-202ENST00000624822 CSDC2Q9Y534 153 aaKnown RBP6.3□□□□□ -1.4
LINC01560-202ENST00000624822 LINC00959A0A1B0GUT2 108 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 K7EMI3 77 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 CCL25O15444 150 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 XCL1P47992 114 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 C2orf66Q6UXQ4 117 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 YPEL4Q96NS1 127 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 TIMM21Q9BVV7 248 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 SPANXA1Q9NS26 97 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 CYSLTR1Q9Y271 337 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
LINC01560-202ENST00000624822 TRAV13-1A0A0B4J241 112 aa6.28□□□□□ -1.4
LINC01560-202ENST00000624822 C1orf196B1AJZ1 125 aa6.28□□□□□ -1.4
LINC01560-202ENST00000624822 GCSHP23434 173 aa6.28□□□□□ -1.4
LINC01560-202ENST00000624822 KRTAP26-1Q6PEX3 210 aa6.28□□□□□ -1.4
LINC01560-202ENST00000624822 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
LINC01560-202ENST00000624822 OPRPNQ99935 248 aaPredicted RBP6.28□□□□□ -1.4
LINC01560-202ENST00000624822 LOC105371267A0A1B0GV96 52 aa6.27□□□□□ -1.41
LINC01560-202ENST00000624822 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
LINC01560-202ENST00000624822 IFITM10A6NMD0 228 aa6.27□□□□□ -1.41
LINC01560-202ENST00000624822 G0S2P27469 103 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms