RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 Q8NA96 180 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
ERCC6-213ENST00000624341 PLA2G2AP14555 144 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 ZFAND3Q9H8U3 227 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 SLPIP03973 132 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 PIK3CD-AS1Q5SR53 167 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 Q6ZTI0 123 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 TMEM256-PLSCR3K7ERE1 68 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 XGP55808 180 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 PROK1P58294 105 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 LMO4P61968 165 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 SPAG11BQ08648 103 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 C9orf66Q5T8R8 295 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 WFDC11Q8NEX6 87 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 KLK12Q9UKR0 248 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 PIEZO1Q92508 2521 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 A6NDX4 124 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 CFAP126Q5VTH2 177 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 NRACQ8N912 160 aa4.22□□□□□ -1.73
ERCC6-213ENST00000624341 M0QY20 66 aa4.21□□□□□ -1.73
ERCC6-213ENST00000624341 UQCRQO14949 82 aa4.21□□□□□ -1.73
ERCC6-213ENST00000624341 FSHBP01225 129 aa4.21□□□□□ -1.73
ERCC6-213ENST00000624341 ZNF843Q8N446 348 aa4.21□□□□□ -1.73
ERCC6-213ENST00000624341 LINC00308Q8TCZ7 52 aa4.21□□□□□ -1.73
ERCC6-213ENST00000624341 Q6ZS46 218 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 WFDC9Q8NEX5 89 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 TRBV10-1A0A0K0K1A3 114 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 MAP6D1Q9H9H5 199 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 TRBV30A0A0K0K1B3 111 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 SPART-AS1P0CW21 52 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 UBE2D1P51668 147 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 USP9XQ93008 2570 aaPredicted RBP4.21□□□□□ -1.74
ERCC6-213ENST00000624341 LY6LH3BQJ8 138 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 NDUFA1O15239 70 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 DEFB135Q30KP9 77 aa4.21□□□□□ -1.74
ERCC6-213ENST00000624341 K7EQG2 157 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 PRR9Q5T870 116 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 TMEM263Q8WUH6 116 aaKnown RBP4.2□□□□□ -1.74
ERCC6-213ENST00000624341 DIRC1Q969H9 104 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 LRCOL1A6NCL2 159 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 F8W735 103 aaPredicted RBP4.2□□□□□ -1.74
ERCC6-213ENST00000624341 SPATA25Q9BR10 227 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 UPK3BQ9BT76 320 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 FBXL19-AS1Q494R0 122 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 HIGD2BQ4VC39 106 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 CLUHP3Q96NS8 147 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 DSCAMO60469 2012 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 NUP210LQ5VU65 1888 aa4.2□□□□□ -1.74
ERCC6-213ENST00000624341 TRBV27A0A0K0K1C4 114 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 CCDC179H3BU77 68 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
ERCC6-213ENST00000624341 DEFB113Q30KQ7 82 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 CXCL5P42830 114 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 SCXQ7RTU7 201 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 UBE2D4Q9Y2X8 147 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 MP68P56378 58 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 UFSP1Q6NVU6 142 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 C10orf99Q6UWK7 81 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 CASC2Q6XLA1 102 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 TMEM89A2RUT3 159 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 EBI3Q14213 229 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 C14orf177Q52M58 125 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 ENHOQ6UWT2 76 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 PRO0255Q9UI72 69 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 NDUFC2O95298 119 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 LINC00269Q8N2A0 174 aa4.19□□□□□ -1.74
ERCC6-213ENST00000624341 USP9YO00507 2555 aaPredicted RBP4.18□□□□□ -1.74
ERCC6-213ENST00000624341 JMJD1CQ15652 2540 aa4.18□□□□□ -1.74
ERCC6-213ENST00000624341 PRM2P04554 102 aa4.18□□□□□ -1.74
ERCC6-213ENST00000624341 C7orf33Q8WU49 177 aa4.18□□□□□ -1.74
ERCC6-213ENST00000624341 ODF3Q96PU9 254 aa4.18□□□□□ -1.74
ERCC6-213ENST00000624341 FAM110AQ9BQ89 295 aa4.18□□□□□ -1.74
ERCC6-213ENST00000624341 POLR2KP53803 58 aaKnown RBP4.18□□□□□ -1.74
ERCC6-213ENST00000624341 C4orf3Q8WVX3 66 aa4.18□□□□□ -1.74
ERCC6-213ENST00000624341 TNFRSF13BO14836 293 aaPredicted RBP4.18□□□□□ -1.74
ERCC6-213ENST00000624341 TSHBP01222 138 aa4.18□□□□□ -1.74
ERCC6-213ENST00000624341 COX7BP24311 80 aa4.18□□□□□ -1.74
ERCC6-213ENST00000624341 FN1P02751 2386 aaKnown RBP4.18□□□□□ -1.74
ERCC6-213ENST00000624341 TRBV6-5A0A0K0K1A5 114 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 MPLKIPQ8TAP9 179 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 BBC3Q96PG8 261 aaPredicted RBP4.17□□□□□ -1.74
ERCC6-213ENST00000624341 LAMA1P25391 3075 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 ABCA12Q86UK0 2595 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 PKD1L2Q7Z442 2459 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 LST1O00453 97 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 PDE6GP18545 87 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 H3BQ85 93 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 C19orf84I3L1E1 186 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 BPY2O14599 106 aa4.17□□□□□ -1.74
ERCC6-213ENST00000624341 DEFB114Q30KQ6 69 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 B9D2Q9BPU9 175 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 COL27A1Q8IZC6 1860 aaPredicted RBP4.16□□□□□ -1.74
ERCC6-213ENST00000624341 FAM236DA0A1B0GTK5 79 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 H7C423 109 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 NDUFA7O95182 113 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 CRYGDP07320 174 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 FAM236CP0DP71 79 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms