RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 FUSP35637 526 aaKnown RBP eCLIP9.45□□□□□ -0.9
CBWD3-217ENST00000621474 SPATA12Q7Z6I5 190 aa9.45□□□□□ -0.9
CBWD3-217ENST00000621474 Q8N8P6 123 aa9.45□□□□□ -0.9
CBWD3-217ENST00000621474 RMI2Q96E14 147 aa9.45□□□□□ -0.9
CBWD3-217ENST00000621474 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
CBWD3-217ENST00000621474 COX11Q9Y6N1 276 aa9.45□□□□□ -0.9
CBWD3-217ENST00000621474 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
CBWD3-217ENST00000621474 LECT2O14960 151 aa9.44□□□□□ -0.9
CBWD3-217ENST00000621474 FABP9Q0Z7S8 132 aa9.44□□□□□ -0.9
CBWD3-217ENST00000621474 BAALCQ8WXS3 180 aa9.44□□□□□ -0.9
CBWD3-217ENST00000621474 SMCO4Q9NRQ5 59 aa9.44□□□□□ -0.9
CBWD3-217ENST00000621474 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
CBWD3-217ENST00000621474 Q8N814 137 aa9.43□□□□□ -0.9
CBWD3-217ENST00000621474 OR5A1Q8NGJ0 315 aa9.43□□□□□ -0.9
CBWD3-217ENST00000621474 TIMM21Q9BVV7 248 aa9.43□□□□□ -0.9
CBWD3-217ENST00000621474 NXT2Q9NPJ8 142 aaKnown RBP9.43□□□□□ -0.9
CBWD3-217ENST00000621474 TRAV8-4A0A0B4J246 113 aa9.42□□□□□ -0.9
CBWD3-217ENST00000621474 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
CBWD3-217ENST00000621474 RAB5AP20339 215 aa9.42□□□□□ -0.9
CBWD3-217ENST00000621474 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
CBWD3-217ENST00000621474 TMEM101Q96IK0 257 aa9.42□□□□□ -0.9
CBWD3-217ENST00000621474 RNASE13Q5GAN3 156 aaKnown RBP9.42□□□□□ -0.9
CBWD3-217ENST00000621474 Q6ZUT4 128 aa9.42□□□□□ -0.9
CBWD3-217ENST00000621474 TMEM18Q96B42 140 aa9.42□□□□□ -0.9
CBWD3-217ENST00000621474 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
CBWD3-217ENST00000621474 K7EMI3 77 aa9.41□□□□□ -0.9
CBWD3-217ENST00000621474 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
CBWD3-217ENST00000621474 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.9
CBWD3-217ENST00000621474 SPANXA1Q9NS26 97 aa9.4□□□□□ -0.9
CBWD3-217ENST00000621474 EREGO14944 169 aa9.39□□□□□ -0.91
CBWD3-217ENST00000621474 ORMDL2Q53FV1 153 aa9.39□□□□□ -0.91
CBWD3-217ENST00000621474 DGAT2L7PQ6IED9 249 aa9.39□□□□□ -0.91
CBWD3-217ENST00000621474 C2orf66Q6UXQ4 117 aa9.39□□□□□ -0.91
CBWD3-217ENST00000621474 C18orf32Q8TCD1 76 aa9.39□□□□□ -0.91
CBWD3-217ENST00000621474 CHCHD10Q8WYQ3 142 aaPredicted RBP9.39□□□□□ -0.91
CBWD3-217ENST00000621474 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
CBWD3-217ENST00000621474 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
CBWD3-217ENST00000621474 C16orf90A8MZG2 172 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 SCO1O75880 301 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 MRPS36P82909 103 aaKnown RBP9.38□□□□□ -0.91
CBWD3-217ENST00000621474 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 COLCA2A8K830 154 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 USP17L23D6RBM5 183 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 SMAGPQ0VAQ4 97 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 CDPF1Q6NVV7 123 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 PRSS3P2Q8NHM4 247 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
CBWD3-217ENST00000621474 APOBP04114 4563 aaKnown RBP9.37□□□□□ -0.91
CBWD3-217ENST00000621474 IGLV4-3A0A075B6K6 122 aa9.37□□□□□ -0.91
CBWD3-217ENST00000621474 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
CBWD3-217ENST00000621474 FOXI1Q12951 378 aa9.37□□□□□ -0.91
CBWD3-217ENST00000621474 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
CBWD3-217ENST00000621474 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.36□□□□□ -0.91
CBWD3-217ENST00000621474 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
CBWD3-217ENST00000621474 CCL25O15444 150 aa9.36□□□□□ -0.91
CBWD3-217ENST00000621474 XCL1P47992 114 aa9.35□□□□□ -0.91
CBWD3-217ENST00000621474 NTN5Q8WTR8 489 aaPredicted RBP9.35□□□□□ -0.91
CBWD3-217ENST00000621474 TOMM6Q96B49 74 aa9.35□□□□□ -0.91
CBWD3-217ENST00000621474 A0A096LNJ9 63 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 TRGC2P03986 189 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 PRSS1P07477 247 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 C15orf56Q8N910 161 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 HSPG2P98160 4391 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 IGLV5-52A0A0A0MRZ9 124 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 SS18Q15532 418 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 LINC00173Q6ZV60 143 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 TMEM141Q96I45 108 aa9.34□□□□□ -0.91
CBWD3-217ENST00000621474 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
CBWD3-217ENST00000621474 KRTAP10-1P60331 282 aa9.33□□□□□ -0.92
CBWD3-217ENST00000621474 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
CBWD3-217ENST00000621474 CD164L2Q6UWJ8 174 aa9.33□□□□□ -0.92
CBWD3-217ENST00000621474 FA2HQ7L5A8 372 aa9.33□□□□□ -0.92
CBWD3-217ENST00000621474 DNAH8Q96JB1 4490 aa9.33□□□□□ -0.92
CBWD3-217ENST00000621474 NPSP0C0P6 89 aa9.32□□□□□ -0.92
CBWD3-217ENST00000621474 LINC00614P0C842 121 aa9.32□□□□□ -0.92
CBWD3-217ENST00000621474 AMELXQ99217 191 aa9.32□□□□□ -0.92
CBWD3-217ENST00000621474 TIMM17AQ99595 171 aa9.32□□□□□ -0.92
CBWD3-217ENST00000621474 AP5S1Q9NUS5 200 aa9.32□□□□□ -0.92
CBWD3-217ENST00000621474 RYR1P21817 5038 aa9.32□□□□□ -0.92
CBWD3-217ENST00000621474 C14orf177Q52M58 125 aa9.31□□□□□ -0.92
CBWD3-217ENST00000621474 IFITM10A6NMD0 228 aa9.31□□□□□ -0.92
CBWD3-217ENST00000621474 SLPIP03973 132 aa9.31□□□□□ -0.92
CBWD3-217ENST00000621474 GCSHP23434 173 aa9.31□□□□□ -0.92
CBWD3-217ENST00000621474 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
CBWD3-217ENST00000621474 G0S2P27469 103 aa9.3□□□□□ -0.92
CBWD3-217ENST00000621474 TEX43Q6ZNM6 134 aa9.3□□□□□ -0.92
CBWD3-217ENST00000621474 ERASQ7Z444 233 aa9.3□□□□□ -0.92
CBWD3-217ENST00000621474 IGHV3OR16-9A0A0B4J2B5 98 aa9.29□□□□□ -0.92
CBWD3-217ENST00000621474 ATP6V1G1O75348 118 aa9.29□□□□□ -0.92
CBWD3-217ENST00000621474 UBE2D1P51668 147 aa9.29□□□□□ -0.92
CBWD3-217ENST00000621474 PMCHL1Q16048 86 aa9.29□□□□□ -0.92
CBWD3-217ENST00000621474 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
CBWD3-217ENST00000621474 hDV102S1A0JD36 115 aa9.28□□□□□ -0.92
CBWD3-217ENST00000621474 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
CBWD3-217ENST00000621474 GVQW2A0A096LPI5 108 aaPredicted RBP9.27□□□□□ -0.92
CBWD3-217ENST00000621474 LINC00310P59036 64 aa9.27□□□□□ -0.92
CBWD3-217ENST00000621474 CNBPP62633 177 aaKnown RBP9.27□□□□□ -0.92
CBWD3-217ENST00000621474 COX6A2Q02221 97 aa9.27□□□□□ -0.92
CBWD3-217ENST00000621474 HIGD2BQ4VC39 106 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms