RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ETDBQ3ZM63 59 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 FXYD2P54710 66 aa6.21□□□□□ -1.42
PTPDC1-204ENST00000620992 GPHB5Q86YW7 130 aa6.21□□□□□ -1.42
PTPDC1-204ENST00000620992 C11orf45Q8TAV5 145 aa6.21□□□□□ -1.42
PTPDC1-204ENST00000620992 ICOSQ9Y6W8 199 aa6.21□□□□□ -1.42
PTPDC1-204ENST00000620992 COX8CQ7Z4L0 72 aa6.21□□□□□ -1.42
PTPDC1-204ENST00000620992 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
PTPDC1-204ENST00000620992 LINC00526Q96FQ7 95 aa6.2□□□□□ -1.42
PTPDC1-204ENST00000620992 NSD1Q96L73 2696 aaPredicted RBP6.2□□□□□ -1.42
PTPDC1-204ENST00000620992 COL12A1Q99715 3063 aa6.2□□□□□ -1.42
PTPDC1-204ENST00000620992 ZNF575Q86XF7 245 aa6.2□□□□□ -1.42
PTPDC1-204ENST00000620992 A0A0J9YX75 114 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 K7EP34 96 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 SIVA1O15304 175 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 TRAV8-4A0A0B4J246 113 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 Q6YL49 198 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 CNFNQ9BYD5 112 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 LRRC75A-AS1Q8N1F1 130 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 FLNCQ14315 2725 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 RMI2Q96E14 147 aa6.19□□□□□ -1.42
PTPDC1-204ENST00000620992 hADV29S1A0JD25 119 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 GHRHP01286 108 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 PRR9Q5T870 116 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 C16orf74Q96GX8 76 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 PROK1P58294 105 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 C4orf3Q8WVX3 66 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 TRBV7-3A0A075B6L6 115 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 K7EQD1 137 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 DEFB114Q30KQ6 69 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 C20orf173Q96LM9 149 aa6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
PTPDC1-204ENST00000620992 DEFB131BA0A096LNP1 70 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 EDN2P20800 178 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 PRSS47A8MTI9 375 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 H3BMG7 143 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 COX7A2LO14548 114 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 NRACQ8N912 160 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 CELSR1Q9NYQ6 3014 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 HERVK_113P63121 156 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 ZFP2Q6ZN57 461 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 C9orf47Q6ZRZ4 202 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 RNF183Q96D59 192 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 MAPKAPK5-AS1Q8N8E1 139 aa6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 UTP20O75691 2785 aaKnown RBP6.17□□□□□ -1.42
PTPDC1-204ENST00000620992 UFSP1Q6NVU6 142 aa6.16□□□□□ -1.42
PTPDC1-204ENST00000620992 PRO0255Q9UI72 69 aa6.16□□□□□ -1.42
PTPDC1-204ENST00000620992 LINC00269Q8N2A0 174 aa6.16□□□□□ -1.42
PTPDC1-204ENST00000620992 CEND1Q8N111 149 aa6.16□□□□□ -1.42
PTPDC1-204ENST00000620992 ETDCA0A1B0GVM5 59 aa6.15□□□□□ -1.42
PTPDC1-204ENST00000620992 K7EMT4 169 aa6.15□□□□□ -1.42
PTPDC1-204ENST00000620992 C20orf78Q9BR46 151 aa6.15□□□□□ -1.42
PTPDC1-204ENST00000620992 TIRAPP58753 221 aa6.15□□□□□ -1.42
PTPDC1-204ENST00000620992 SPAG11BQ08648 103 aa6.15□□□□□ -1.42
PTPDC1-204ENST00000620992 TM2D2Q9BX73 214 aa6.15□□□□□ -1.42
PTPDC1-204ENST00000620992 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.42
PTPDC1-204ENST00000620992 NDUFS5O43920 106 aa6.15□□□□□ -1.43
PTPDC1-204ENST00000620992 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.43
PTPDC1-204ENST00000620992 HIGD1BQ9P298 99 aa6.15□□□□□ -1.43
PTPDC1-204ENST00000620992 XAGE1AQ9HD64 81 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 RETNQ9HD89 108 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 LY6G6CO95867 125 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 ZFAND2AQ8N6M9 145 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 SLC25A29Q8N8R3 303 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 PRO1854Q9UHT4 67 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 NCR3O14931 201 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 BRI3O95415 125 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 FOXI1Q12951 378 aa6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 KLK5Q9Y337 293 aaPredicted RBP6.14□□□□□ -1.43
PTPDC1-204ENST00000620992 SND1-IT1Q9HBX3 110 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 K7EQG2 157 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 SHISA2Q6UWI4 295 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 PSMG3-AS1Q96PY0 264 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 TEX48A0A1B0GUV7 120 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 TMEM263Q8WUH6 116 aaKnown RBP6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 LINC01546A6NGU7 62 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 C12orf74Q32Q52 190 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 Q6ZUT4 128 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
PTPDC1-204ENST00000620992 STAB2Q8WWQ8 2551 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 ZFHX3Q15911 3703 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 IGSF10Q6WRI0 2623 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 LOC100131303A0A0U1RQF7 123 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 G3V4G9 280 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 NDUFA11Q86Y39 141 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 DNAJC30Q96LL9 226 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 ANAPC13Q9BS18 74 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 GAGE12HA6NDE8 117 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 INSL3P51460 131 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 CARD19Q96LW7 228 aa6.12□□□□□ -1.43
PTPDC1-204ENST00000620992 A4D1N5 150 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 C11orf86A6NJI1 115 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 UBE2AP49459 152 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 ZNF702PQ9H963 129 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 SOCS3O14543 225 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 WFDC2Q14508 124 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 COX7B2Q8TF08 81 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 BAALCQ8WXS3 180 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 TMEM89A2RUT3 159 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms