RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 GAGE4Q13068 117 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 GAGE5Q13069 117 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 COTL1Q14019 142 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 GAGE13Q4V321 117 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 DAZ4Q86SG3 579 aaKnown RBP11.02□□□□□ -0.65
CD40-207ENST00000620709 DEFB104AQ8WTQ1 72 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 DAZ3Q9NR90 486 aaKnown RBP11.02□□□□□ -0.65
CD40-207ENST00000620709 PRO0255Q9UI72 69 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 SIVA1O15304 175 aa11.01□□□□□ -0.65
CD40-207ENST00000620709 CRYBA4P53673 196 aa11.01□□□□□ -0.65
CD40-207ENST00000620709 PET117Q6UWS5 81 aa11.01□□□□□ -0.65
CD40-207ENST00000620709 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
CD40-207ENST00000620709 C20orf202A1L168 122 aa11□□□□□ -0.65
CD40-207ENST00000620709 LOC100131303A0A0U1RQF7 123 aa10.99□□□□□ -0.65
CD40-207ENST00000620709 Q8N976 141 aa10.99□□□□□ -0.65
CD40-207ENST00000620709 SCGB3A1Q96QR1 104 aa10.99□□□□□ -0.65
CD40-207ENST00000620709 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
CD40-207ENST00000620709 APOBP04114 4563 aaKnown RBP10.99□□□□□ -0.65
CD40-207ENST00000620709 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.99□□□□□ -0.65
CD40-207ENST00000620709 LINC00694P0DN24 101 aa10.99□□□□□ -0.65
CD40-207ENST00000620709 MAPKAPK5-AS1Q8N8E1 139 aa10.99□□□□□ -0.65
CD40-207ENST00000620709 C20orf203Q8NBC4 194 aa10.99□□□□□ -0.65
CD40-207ENST00000620709 DNAH5Q8TE73 4624 aa10.98□□□□□ -0.65
CD40-207ENST00000620709 H0Y8G0 127 aa10.98□□□□□ -0.65
CD40-207ENST00000620709 GYPEP15421 78 aa10.98□□□□□ -0.65
CD40-207ENST00000620709 MRPL23Q16540 153 aaKnown RBP10.98□□□□□ -0.65
CD40-207ENST00000620709 ERASQ7Z444 233 aa10.98□□□□□ -0.65
CD40-207ENST00000620709 CDK2AP2O75956 126 aa10.97□□□□□ -0.65
CD40-207ENST00000620709 KRTAP10-2P60368 255 aa10.97□□□□□ -0.65
CD40-207ENST00000620709 RPL39P62891 51 aaKnown RBP10.97□□□□□ -0.65
CD40-207ENST00000620709 CDPF1Q6NVV7 123 aa10.97□□□□□ -0.65
CD40-207ENST00000620709 LYPD5Q6UWN5 251 aa10.97□□□□□ -0.65
CD40-207ENST00000620709 Q6ZN92 141 aa10.97□□□□□ -0.65
CD40-207ENST00000620709 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
CD40-207ENST00000620709 PRSS1P07477 247 aa10.96□□□□□ -0.65
CD40-207ENST00000620709 LINC01545Q5VT33 79 aa10.96□□□□□ -0.65
CD40-207ENST00000620709 TIMM17AQ99595 171 aa10.96□□□□□ -0.65
CD40-207ENST00000620709 GTSF1LQ9H1H1 148 aa10.96□□□□□ -0.65
CD40-207ENST00000620709 S100A12P80511 92 aa10.95□□□□□ -0.66
CD40-207ENST00000620709 TMEM141Q96I45 108 aa10.95□□□□□ -0.66
CD40-207ENST00000620709 IGIPA6NJ69 53 aa10.94□□□□□ -0.66
CD40-207ENST00000620709 TMEM97Q5BJF2 176 aa10.94□□□□□ -0.66
CD40-207ENST00000620709 TEX43Q6ZNM6 134 aa10.94□□□□□ -0.66
CD40-207ENST00000620709 ATP6V0E2Q8NHE4 81 aa10.94□□□□□ -0.66
CD40-207ENST00000620709 TRAV9-2A0A087WT02 112 aa10.93□□□□□ -0.66
CD40-207ENST00000620709 EREGO14944 169 aa10.93□□□□□ -0.66
CD40-207ENST00000620709 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.66
CD40-207ENST00000620709 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
CD40-207ENST00000620709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.92□□□□□ -0.66
CD40-207ENST00000620709 TRAV12-1A0A0B4J245 112 aa10.92□□□□□ -0.66
CD40-207ENST00000620709 IGKV2-29A2NJV5 120 aaPredicted RBP10.92□□□□□ -0.66
CD40-207ENST00000620709 NPSP0C0P6 89 aa10.92□□□□□ -0.66
CD40-207ENST00000620709 BAALCQ8WXS3 180 aa10.92□□□□□ -0.66
CD40-207ENST00000620709 SPANXA1Q9NS26 97 aa10.92□□□□□ -0.66
CD40-207ENST00000620709 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
CD40-207ENST00000620709 TRBV25-1A0A075B6N4 114 aa10.91□□□□□ -0.66
CD40-207ENST00000620709 SMAGPQ0VAQ4 97 aa10.91□□□□□ -0.66
CD40-207ENST00000620709 ODF1Q14990 250 aa10.91□□□□□ -0.66
CD40-207ENST00000620709 Q6ZRN7 208 aaPredicted RBP10.91□□□□□ -0.66
CD40-207ENST00000620709 WFDC10BQ8IUB3 73 aa10.91□□□□□ -0.66
CD40-207ENST00000620709 TMEM243Q9BU79 118 aa10.91□□□□□ -0.66
CD40-207ENST00000620709 A0A087WX48 190 aa10.9□□□□□ -0.66
CD40-207ENST00000620709 PAPPA-AS1Q5QFB9 102 aa10.9□□□□□ -0.66
CD40-207ENST00000620709 SH2D6Q7Z4S9 175 aa10.9□□□□□ -0.66
CD40-207ENST00000620709 ATOH7Q8N100 152 aa10.9□□□□□ -0.66
CD40-207ENST00000620709 PMCHL2Q9BQD1 86 aa10.9□□□□□ -0.66
CD40-207ENST00000620709 VAMP8Q9BV40 100 aa10.9□□□□□ -0.66
CD40-207ENST00000620709 UBE2D4Q9Y2X8 147 aa10.9□□□□□ -0.66
CD40-207ENST00000620709 TRBV6-8A0A0A6YYG3 113 aa10.89□□□□□ -0.67
CD40-207ENST00000620709 NFE4Q86UQ8 179 aa10.89□□□□□ -0.67
CD40-207ENST00000620709 TIMM21Q9BVV7 248 aa10.89□□□□□ -0.67
CD40-207ENST00000620709 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
CD40-207ENST00000620709 UBE2L6O14933 153 aa10.89□□□□□ -0.67
CD40-207ENST00000620709 PMVKQ15126 192 aa10.89□□□□□ -0.67
CD40-207ENST00000620709 H7C423 109 aa10.88□□□□□ -0.67
CD40-207ENST00000620709 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
CD40-207ENST00000620709 HSBP1L1C9JCN9 74 aa10.87□□□□□ -0.67
CD40-207ENST00000620709 F8VRH5 84 aa10.87□□□□□ -0.67
CD40-207ENST00000620709 DNAH10OSP0CZ25 163 aa10.87□□□□□ -0.67
CD40-207ENST00000620709 MRPL52Q86TS9 123 aaKnown RBP10.87□□□□□ -0.67
CD40-207ENST00000620709 Q8N1X5 172 aa10.87□□□□□ -0.67
CD40-207ENST00000620709 PGPEP1Q9NXJ5 209 aa10.87□□□□□ -0.67
CD40-207ENST00000620709 DPM2O94777 84 aa10.86□□□□□ -0.67
CD40-207ENST00000620709 IGKCP01834 107 aa10.86□□□□□ -0.67
CD40-207ENST00000620709 FGF6P10767 208 aa10.86□□□□□ -0.67
CD40-207ENST00000620709 PLNP26678 52 aa10.86□□□□□ -0.67
CD40-207ENST00000620709 MRPS36P82909 103 aaKnown RBP10.86□□□□□ -0.67
CD40-207ENST00000620709 DGAT2L7PQ6IED9 249 aa10.86□□□□□ -0.67
CD40-207ENST00000620709 OPRPNQ99935 248 aaPredicted RBP10.86□□□□□ -0.67
CD40-207ENST00000620709 VCX2Q9H322 139 aa10.86□□□□□ -0.67
CD40-207ENST00000620709 CST9LQ9H4G1 147 aa10.86□□□□□ -0.67
CD40-207ENST00000620709 MRPL35Q9NZE8 188 aaKnown RBP10.86□□□□□ -0.67
CD40-207ENST00000620709 PAM16Q9Y3D7 125 aa10.86□□□□□ -0.67
CD40-207ENST00000620709 CSDC2Q9Y534 153 aaKnown RBP10.86□□□□□ -0.67
CD40-207ENST00000620709 AMMECR1LQ6DCA0 310 aa10.85□□□□□ -0.67
CD40-207ENST00000620709 ZNF664Q8N3J9 261 aa10.85□□□□□ -0.67
CD40-207ENST00000620709 CHCHD5Q9BSY4 110 aa10.85□□□□□ -0.67
CD40-207ENST00000620709 ZNF25P17030 456 aaPredicted RBP10.84□□□□□ -0.67
CD40-207ENST00000620709 AMELXQ99217 191 aa10.84□□□□□ -0.67
CD40-207ENST00000620709 A0A087WTM6 91 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms