RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 CST9LQ9H4G1 147 aa11.55□□□□□ -0.56
PCGF3-213ENST00000620529 FGF6P10767 208 aa11.54□□□□□ -0.56
PCGF3-213ENST00000620529 CHCHD5Q9BSY4 110 aa11.54□□□□□ -0.56
PCGF3-213ENST00000620529 TENM3Q9P273 2699 aa11.54□□□□□ -0.56
PCGF3-213ENST00000620529 ZC2HC1BQ5TFG8 222 aa11.53□□□□□ -0.56
PCGF3-213ENST00000620529 MRPL52Q86TS9 123 aaKnown RBP11.53□□□□□ -0.56
PCGF3-213ENST00000620529 DEFB131BA0A096LNP1 70 aa11.53□□□□□ -0.56
PCGF3-213ENST00000620529 H3BNG1 76 aa11.53□□□□□ -0.56
PCGF3-213ENST00000620529 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
PCGF3-213ENST00000620529 CSDC2Q9Y534 153 aaKnown RBP11.53□□□□□ -0.56
PCGF3-213ENST00000620529 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
PCGF3-213ENST00000620529 Q6ZUT4 128 aa11.52□□□□□ -0.57
PCGF3-213ENST00000620529 C2orf88Q9BSF0 95 aa11.52□□□□□ -0.57
PCGF3-213ENST00000620529 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
PCGF3-213ENST00000620529 ZNF25P17030 456 aaPredicted RBP11.51□□□□□ -0.57
PCGF3-213ENST00000620529 GAGE6Q13070 117 aa11.51□□□□□ -0.57
PCGF3-213ENST00000620529 RNASE13Q5GAN3 156 aaKnown RBP11.51□□□□□ -0.57
PCGF3-213ENST00000620529 AMELXQ99217 191 aa11.51□□□□□ -0.57
PCGF3-213ENST00000620529 TRAV10A0A0B4J240 114 aa11.5□□□□□ -0.57
PCGF3-213ENST00000620529 STPG4Q8N801 248 aa11.49□□□□□ -0.57
PCGF3-213ENST00000620529 FAM104AQ969W3 186 aa11.49□□□□□ -0.57
PCGF3-213ENST00000620529 IGLV4-69A0A075B6H9 119 aa11.49□□□□□ -0.57
PCGF3-213ENST00000620529 DEFA6Q01524 100 aa11.48□□□□□ -0.57
PCGF3-213ENST00000620529 TMEM262E9PQX1 116 aa11.47□□□□□ -0.57
PCGF3-213ENST00000620529 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
PCGF3-213ENST00000620529 CDC42SE2Q9NRR3 84 aa11.47□□□□□ -0.57
PCGF3-213ENST00000620529 C11orf86A6NJI1 115 aa11.46□□□□□ -0.57
PCGF3-213ENST00000620529 CHAC1Q9BUX1 264 aa11.46□□□□□ -0.57
PCGF3-213ENST00000620529 TCTAP57738 103 aa11.46□□□□□ -0.58
PCGF3-213ENST00000620529 ANKRD39Q53RE8 183 aa11.46□□□□□ -0.58
PCGF3-213ENST00000620529 LELP1Q5T871 98 aa11.46□□□□□ -0.58
PCGF3-213ENST00000620529 NFE4Q86UQ8 179 aa11.46□□□□□ -0.58
PCGF3-213ENST00000620529 A0A0J9YXV3 536 aa11.45□□□□□ -0.58
PCGF3-213ENST00000620529 IGLC3P0DOY3 106 aa11.45□□□□□ -0.58
PCGF3-213ENST00000620529 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
PCGF3-213ENST00000620529 C14orf144Q96I85 54 aa11.45□□□□□ -0.58
PCGF3-213ENST00000620529 UQCR10Q9UDW1 63 aa11.45□□□□□ -0.58
PCGF3-213ENST00000620529 DNHD1Q96M86 4753 aa11.44□□□□□ -0.58
PCGF3-213ENST00000620529 HUWE1Q7Z6Z7 4374 aaKnown RBP11.44□□□□□ -0.58
PCGF3-213ENST00000620529 DDTP30046 118 aa11.44□□□□□ -0.58
PCGF3-213ENST00000620529 NMUP48645 174 aa11.44□□□□□ -0.58
PCGF3-213ENST00000620529 HERVK_113P61574 105 aa11.44□□□□□ -0.58
PCGF3-213ENST00000620529 MIEN1Q9BRT3 115 aa11.44□□□□□ -0.58
PCGF3-213ENST00000620529 IGLV4-60A0A075B6I1 120 aa11.43□□□□□ -0.58
PCGF3-213ENST00000620529 UBE2D1P51668 147 aa11.43□□□□□ -0.58
PCGF3-213ENST00000620529 LBHQ53QV2 105 aaPredicted RBP11.43□□□□□ -0.58
PCGF3-213ENST00000620529 LYPD5Q6UWN5 251 aa11.43□□□□□ -0.58
PCGF3-213ENST00000620529 A0A1B0GUV1 79 aa11.42□□□□□ -0.58
PCGF3-213ENST00000620529 TIRAPP58753 221 aa11.42□□□□□ -0.58
PCGF3-213ENST00000620529 SEC11AP67812 179 aa11.42□□□□□ -0.58
PCGF3-213ENST00000620529 MPV17L2Q567V2 206 aa11.42□□□□□ -0.58
PCGF3-213ENST00000620529 C15orf53Q8NAA6 179 aa11.42□□□□□ -0.58
PCGF3-213ENST00000620529 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
PCGF3-213ENST00000620529 TRAV13-1A0A0B4J241 112 aa11.42□□□□□ -0.58
PCGF3-213ENST00000620529 TINCRA0A1B0GVN0 87 aa11.42□□□□□ -0.58
PCGF3-213ENST00000620529 SLC25A34Q6PIV7 304 aa11.42□□□□□ -0.58
PCGF3-213ENST00000620529 TRAV8-6A0A0B4J262 113 aa11.41□□□□□ -0.58
PCGF3-213ENST00000620529 COX8AP10176 69 aa11.41□□□□□ -0.58
PCGF3-213ENST00000620529 RBX1P62877 108 aa11.41□□□□□ -0.58
PCGF3-213ENST00000620529 ZNF22P17026 224 aaPredicted RBP11.4□□□□□ -0.58
PCGF3-213ENST00000620529 IGKV3OR2-268A0A0C4DH90 116 aa11.39□□□□□ -0.59
PCGF3-213ENST00000620529 HERVK_113P63121 156 aa11.39□□□□□ -0.59
PCGF3-213ENST00000620529 IGKV2D-26A0A0A0MRZ7 120 aa11.38□□□□□ -0.59
PCGF3-213ENST00000620529 E9PLD3 99 aa11.38□□□□□ -0.59
PCGF3-213ENST00000620529 HNRNPA3P51991 378 aaKnown RBP11.38□□□□□ -0.59
PCGF3-213ENST00000620529 FAM19A3Q7Z5A8 133 aa11.38□□□□□ -0.59
PCGF3-213ENST00000620529 TMEM223A0PJW6 202 aa11.37□□□□□ -0.59
PCGF3-213ENST00000620529 IGLL5B9A064 214 aa11.37□□□□□ -0.59
PCGF3-213ENST00000620529 ANGP03950 147 aaKnown RBP11.37□□□□□ -0.59
PCGF3-213ENST00000620529 LINC00242Q5T6M2 205 aa11.37□□□□□ -0.59
PCGF3-213ENST00000620529 H3BRM9 83 aa11.36□□□□□ -0.59
PCGF3-213ENST00000620529 DNAH9Q9NYC9 4486 aa11.36□□□□□ -0.59
PCGF3-213ENST00000620529 ESRGQ1W209 222 aa11.36□□□□□ -0.59
PCGF3-213ENST00000620529 PCP2Q8IVA1 136 aa11.36□□□□□ -0.59
PCGF3-213ENST00000620529 COL7A1Q02388 2944 aa11.35□□□□□ -0.59
PCGF3-213ENST00000620529 BOD1L2Q8IYS8 172 aa11.35□□□□□ -0.59
PCGF3-213ENST00000620529 IGLV5-45A0A087WSX0 123 aa11.34□□□□□ -0.59
PCGF3-213ENST00000620529 COX6A2Q02221 97 aa11.34□□□□□ -0.59
PCGF3-213ENST00000620529 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
PCGF3-213ENST00000620529 DLEU1O43261 78 aa11.34□□□□□ -0.59
PCGF3-213ENST00000620529 SS18Q15532 418 aa11.34□□□□□ -0.59
PCGF3-213ENST00000620529 CLPSL2Q6UWE3 100 aa11.34□□□□□ -0.59
PCGF3-213ENST00000620529 LINC00269Q8N2A0 174 aa11.34□□□□□ -0.59
PCGF3-213ENST00000620529 CDKN2A-AS1Q9UH64 79 aa11.34□□□□□ -0.59
PCGF3-213ENST00000620529 IGHV3-64A0A075B6Q5 118 aa11.33□□□□□ -0.6
PCGF3-213ENST00000620529 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
PCGF3-213ENST00000620529 WFDC10BQ8IUB3 73 aa11.33□□□□□ -0.6
PCGF3-213ENST00000620529 Q8N3U1 123 aa11.33□□□□□ -0.6
PCGF3-213ENST00000620529 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
PCGF3-213ENST00000620529 LEPROTO15243 131 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 LGALS3P17931 250 aaKnown RBP11.32□□□□□ -0.6
PCGF3-213ENST00000620529 PLEKHB2Q96CS7 222 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 CCL25O15444 150 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 IGHV3-30P01768 117 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 IGHV3-33P01772 117 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 SPINK8P0C7L1 97 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 IGHV3-30-3P0DP02 117 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 IGHV3-30-5P0DP03 117 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 REG3AQ06141 175 aa11.32□□□□□ -0.6
PCGF3-213ENST00000620529 J3QQQ9 107 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms