RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 C20orf203Q8NBC4 194 aa6.32□□□□□ -1.4
SYN3-213ENST00000619146 CHCHD7Q9BUK0 85 aa6.32□□□□□ -1.4
SYN3-213ENST00000619146 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
SYN3-213ENST00000619146 TRAV8-6A0A0B4J262 113 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 UBE2L6O14933 153 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 ATP5LO75964 103 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 CCL18P55774 89 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 C2orf66Q6UXQ4 117 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 HIST3H2BBQ8N257 126 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 C6orf223Q8N319 242 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 FAM19A2Q8N3H0 131 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 TOMM6Q96B49 74 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 SPANXA1Q9NS26 97 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 UBR4Q5T4S7 5183 aa6.31□□□□□ -1.4
SYN3-213ENST00000619146 NBDYA0A0U1RRE5 68 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 EPM2AB3EWF7 344 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 LEPROTL1O95214 131 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 NPSP0C0P6 89 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 PDZD11Q5EBL8 140 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 DEFB104AQ8WTQ1 72 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 TMEM141Q96I45 108 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 TIMM21Q9BVV7 248 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 PYGO1Q9Y3Y4 419 aa6.3□□□□□ -1.4
SYN3-213ENST00000619146 CSDC2Q9Y534 153 aaKnown RBP6.3□□□□□ -1.4
SYN3-213ENST00000619146 A0A096LNJ9 63 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 ZNF25P17030 456 aaPredicted RBP6.29□□□□□ -1.4
SYN3-213ENST00000619146 ESRGQ1W209 222 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 PAPPA-AS1Q5QFB9 102 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 AMMECR1LQ6DCA0 310 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 ERASQ7Z444 233 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 MRPL52Q86TS9 123 aaKnown RBP6.29□□□□□ -1.4
SYN3-213ENST00000619146 TIMM17AQ99595 171 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
SYN3-213ENST00000619146 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.28□□□□□ -1.4
SYN3-213ENST00000619146 IGKV2-29A2NJV5 120 aaPredicted RBP6.28□□□□□ -1.4
SYN3-213ENST00000619146 IGIPA6NJ69 53 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 TMEM262E9PQX1 116 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.28□□□□□ -1.4
SYN3-213ENST00000619146 FGF6P10767 208 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 RPL39P62891 51 aaKnown RBP6.28□□□□□ -1.4
SYN3-213ENST00000619146 GAGE6Q13070 117 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 Q6ZN92 141 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 OR5A1Q8NGJ0 315 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 TMEM101Q96IK0 257 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 UBE2D4Q9Y2X8 147 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
SYN3-213ENST00000619146 FAT1Q14517 4588 aa6.28□□□□□ -1.4
SYN3-213ENST00000619146 A0A087WX48 190 aa6.27□□□□□ -1.41
SYN3-213ENST00000619146 A0A1B0GUV1 79 aa6.27□□□□□ -1.41
SYN3-213ENST00000619146 IFITM10A6NMD0 228 aa6.27□□□□□ -1.41
SYN3-213ENST00000619146 FABP4P15090 132 aa6.27□□□□□ -1.41
SYN3-213ENST00000619146 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
SYN3-213ENST00000619146 IFI27L1Q96BM0 104 aa6.27□□□□□ -1.41
SYN3-213ENST00000619146 MAP1LC3CQ9BXW4 147 aa6.27□□□□□ -1.41
SYN3-213ENST00000619146 UPK3BQ9BT76 320 aa6.26□□□□□ -1.41
SYN3-213ENST00000619146 VCX2Q9H322 139 aa6.26□□□□□ -1.41
SYN3-213ENST00000619146 LINC00588Q9Y4M8 146 aa6.26□□□□□ -1.41
SYN3-213ENST00000619146 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
SYN3-213ENST00000619146 K7EP13 123 aa6.25□□□□□ -1.41
SYN3-213ENST00000619146 PRSS1P07477 247 aa6.25□□□□□ -1.41
SYN3-213ENST00000619146 RBX1P62877 108 aa6.25□□□□□ -1.41
SYN3-213ENST00000619146 Q5VSD8 79 aa6.25□□□□□ -1.41
SYN3-213ENST00000619146 ZNF664Q8N3J9 261 aa6.25□□□□□ -1.41
SYN3-213ENST00000619146 KRTAP1-5Q9BYS1 174 aa6.25□□□□□ -1.41
SYN3-213ENST00000619146 SYS1-DBNDD2H3BUS1 97 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 SMR3BP02814 79 aaPredicted RBP6.24□□□□□ -1.41
SYN3-213ENST00000619146 DNAH10OSP0CZ25 163 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 AKR1D1P51857 326 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 KRTDAPP60985 99 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 PMVKQ15126 192 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 MPV17L2Q567V2 206 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 LINC01556Q5JQF7 62 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 TEX43Q6ZNM6 134 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 OR10D4PQ8NGN7 298 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 C2orf88Q9BSF0 95 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 CDC42SE2Q9NRR3 84 aa6.24□□□□□ -1.41
SYN3-213ENST00000619146 VPS13BQ7Z7G8 4022 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 TRAV9-2A0A087WT02 112 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 TRAV12-1A0A0B4J245 112 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 C20orf202A1L168 122 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 SIVA1O15304 175 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 HAMPP81172 84 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 PET117Q6UWS5 81 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 Q6ZUT4 128 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 LINC00173Q6ZV60 143 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 WFDC10BQ8IUB3 73 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 Q8N976 141 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 BAALCQ8WXS3 180 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 AMELXQ99217 191 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 CST9LQ9H4G1 147 aa6.23□□□□□ -1.41
SYN3-213ENST00000619146 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
SYN3-213ENST00000619146 CCL25O15444 150 aa6.22□□□□□ -1.41
SYN3-213ENST00000619146 ANGP03950 147 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms