RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CSDC2Q9Y534 153 aaKnown RBP2.66□□□□□ -1.98
SNCA-213ENST00000618500 LINC00959A0A1B0GUT2 108 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 C19orf71A6NCJ1 209 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 SMAGPQ0VAQ4 97 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 PHF5AQ7RTV0 110 aaKnown RBP2.66□□□□□ -1.98
SNCA-213ENST00000618500 CNFNQ9BYD5 112 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 TRBV6-5A0A0K0K1A5 114 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 GRIFINA4D1Z8 144 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 PLA2G10O15496 165 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 LYRM1O43325 122 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 IL7P13232 177 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 RPL12P30050 165 aaKnown RBP2.66□□□□□ -1.98
SNCA-213ENST00000618500 CTXND1A0A1B0GTU2 59 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 F2Z2F3 143 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 TRGC1P0CF51 173 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 SEC61BP60468 96 aaKnown RBP2.65□□□□□ -1.99
SNCA-213ENST00000618500 SS18Q15532 418 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 LINC00299Q6ZSB3 139 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 CYTL1Q9NRR1 136 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 TP73-AS1Q9UF72 201 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 BCL2L11O43521 198 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 SPANXN1Q5VSR9 72 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 SLC7A5P1Q8MH63 180 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 LINC01561Q8N1V8 128 aa2.65□□□□□ -1.99
SNCA-213ENST00000618500 MPC2O95563 127 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 ATP6V0CP27449 155 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 CTRLP40313 264 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 UBE2G1P62253 170 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 EIF5AP63241 154 aaKnown RBP2.64□□□□□ -1.99
SNCA-213ENST00000618500 EIF5AL1Q6IS14 154 aaKnown RBP2.64□□□□□ -1.99
SNCA-213ENST00000618500 SMDT1Q9H4I9 107 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 IGLV7-46A0A075B6I9 117 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 APCSP02743 223 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 TMEM241Q24JQ0 296 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 SPAG11AQ6PDA7 123 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 TEX261Q6UWH6 196 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP11-1Q8IUC1 163 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 TMEM101Q96IK0 257 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 IMMP2LQ96T52 175 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 TIMM21Q9BVV7 248 aa2.64□□□□□ -1.99
SNCA-213ENST00000618500 A0A1B0GVG6 124 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 COX7A2LO14548 114 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 NTF3P20783 257 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 MT1HP80294 61 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 GAGE2BQ13066 116 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 TYMSOSQ8TAI1 123 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 TRBV30A0A0K0K1B3 111 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 TSHBP01222 138 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 NKX2-5P52952 324 aaPredicted RBP2.63□□□□□ -1.99
SNCA-213ENST00000618500 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
SNCA-213ENST00000618500 BLOC1S1P78537 153 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP7-1Q8IUC3 87 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 STOML3Q8TAV4 291 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 CAMK2N2Q96S95 79 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 CDC42SE2Q9NRR3 84 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 NUDT15Q9NV35 164 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 M0R036 132 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 AKR1C3P42330 323 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP10-6P60371 365 aaPredicted RBP2.63□□□□□ -1.99
SNCA-213ENST00000618500 ZNF726P1Q15940 193 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 AMMECR1LQ6DCA0 310 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP13-1Q8IUC0 172 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 LINC00304Q8N9R0 145 aa2.63□□□□□ -1.99
SNCA-213ENST00000618500 BCL2P10415 239 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 RPL28P46779 137 aaKnown RBP2.62□□□□□ -1.99
SNCA-213ENST00000618500 LBHQ53QV2 105 aaPredicted RBP2.62□□□□□ -1.99
SNCA-213ENST00000618500 LINC00173Q6ZV60 143 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 PPP1R1CQ8WVI7 109 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 C11orf52Q96A22 123 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 A0A087WZ39 114 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 C1orf196B1AJZ1 125 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 TEX46H3BTG2 121 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 BCE1O60756 84 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP4-1Q9BYQ7 146 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 BIN3Q9NQY0 253 aa2.62□□□□□ -1.99
SNCA-213ENST00000618500 IGLV5-37A0A075B6J1 123 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 A0A087X002 238 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 XKRY2A2RUG3 117 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 RAB19A4D1S5 217 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 I3L3M4 83 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 M0QXV9 152 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 RAB5CP51148 216 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 RPL18AQ02543 176 aaKnown RBP2.61□□□□□ -1.99
SNCA-213ENST00000618500 KRTAP13-2Q52LG2 175 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 OR2D3Q8NGH3 330 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 BTF3L4Q96K17 158 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 NDUFA1O15239 70 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 XCL1P47992 114 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 H2BFSP57053 126 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 PET117Q6UWS5 81 aa2.61□□□□□ -1.99
SNCA-213ENST00000618500 MGPP08493 103 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 SPAG11BQ08648 103 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 GATD1Q8NB37 220 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 PPDPFQ9H3Y8 114 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 TMSB15BA0A087X1C1 80 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 TRBV27A0A0K0K1C4 114 aa2.6□□□□□ -1.99
SNCA-213ENST00000618500 TCAPO15273 167 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms