RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 IGHV3OR16-12A0A075B7B8 117 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 A0A087WW49 117 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 ESRGQ1W209 222 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 COX7B2Q8TF08 81 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 K7ENP7 123 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 G3V318 75 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 H7BZZ5 65 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 SPINK13Q1W4C9 94 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 FDCSPQ8NFU4 85 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 SMIM11BQ8TCY0 68 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 LINC01600Q96MT4 127 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 SPTAN1Q13813 2472 aaKnown RBP5.44□□□□□ -1.54
PDE6A-205ENST00000617647 PLAC8L1A1L4L8 177 aa5.43□□□□□ -1.54
PDE6A-205ENST00000617647 RNASE3P12724 160 aaKnown RBP5.43□□□□□ -1.54
PDE6A-205ENST00000617647 BPESC1Q9GZL8 116 aa5.43□□□□□ -1.54
PDE6A-205ENST00000617647 CLPSL1A2RUU4 121 aa5.43□□□□□ -1.54
PDE6A-205ENST00000617647 TMEM256-PLSCR3K7ERE1 68 aa5.43□□□□□ -1.54
PDE6A-205ENST00000617647 ZFAND2AQ8N6M9 145 aa5.43□□□□□ -1.54
PDE6A-205ENST00000617647 RANBP2P49792 3224 aaKnown RBP5.43□□□□□ -1.54
PDE6A-205ENST00000617647 PATE3B3GLJ2 98 aa5.43□□□□□ -1.54
PDE6A-205ENST00000617647 MDS2Q8NDY4 140 aa5.43□□□□□ -1.54
PDE6A-205ENST00000617647 LY6LH3BQJ8 138 aa5.42□□□□□ -1.54
PDE6A-205ENST00000617647 M0QY20 66 aa5.42□□□□□ -1.54
PDE6A-205ENST00000617647 RHPN1-AS1Q9BWJ2 59 aa5.42□□□□□ -1.54
PDE6A-205ENST00000617647 ATP6V0E1O15342 81 aa5.42□□□□□ -1.54
PDE6A-205ENST00000617647 BSPH1Q075Z2 132 aa5.42□□□□□ -1.54
PDE6A-205ENST00000617647 LITAFQ99732 161 aa5.42□□□□□ -1.54
PDE6A-205ENST00000617647 GNLYP22749 145 aa5.42□□□□□ -1.54
PDE6A-205ENST00000617647 Q96MF0 132 aa5.42□□□□□ -1.54
PDE6A-205ENST00000617647 NREPQ16612 68 aa5.41□□□□□ -1.54
PDE6A-205ENST00000617647 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
PDE6A-205ENST00000617647 FAM110DQ8TAY7 271 aaPredicted RBP5.41□□□□□ -1.54
PDE6A-205ENST00000617647 SPEGQ15772 3267 aa5.41□□□□□ -1.54
PDE6A-205ENST00000617647 TRBV6-5A0A0K0K1A5 114 aa5.41□□□□□ -1.54
PDE6A-205ENST00000617647 LY6G6EA0A0G2JKS1 128 aa5.41□□□□□ -1.54
PDE6A-205ENST00000617647 PRR4Q16378 134 aa5.41□□□□□ -1.54
PDE6A-205ENST00000617647 Q8N3U1 123 aa5.41□□□□□ -1.54
PDE6A-205ENST00000617647 RNASE6Q93091 150 aaKnown RBP5.41□□□□□ -1.54
PDE6A-205ENST00000617647 U3KQA8 63 aa5.41□□□□□ -1.54
PDE6A-205ENST00000617647 STHQ8IWL8 128 aa5.4□□□□□ -1.54
PDE6A-205ENST00000617647 LINC00528Q8N1L1 170 aa5.4□□□□□ -1.54
PDE6A-205ENST00000617647 TMEM254Q8TBM7 123 aa5.4□□□□□ -1.54
PDE6A-205ENST00000617647 TRBV10-1A0A0K0K1A3 114 aa5.4□□□□□ -1.55
PDE6A-205ENST00000617647 IGLV1-47P01700 117 aa5.4□□□□□ -1.55
PDE6A-205ENST00000617647 CACNA1AO00555 2505 aa5.4□□□□□ -1.55
PDE6A-205ENST00000617647 MRGPRG-AS1Q2M3A8 158 aa5.39□□□□□ -1.55
PDE6A-205ENST00000617647 C22orf34Q6ZV56 151 aa5.39□□□□□ -1.55
PDE6A-205ENST00000617647 DEFB124Q8NES8 71 aa5.39□□□□□ -1.55
PDE6A-205ENST00000617647 LINC00467Q9BRT7 94 aa5.39□□□□□ -1.55
PDE6A-205ENST00000617647 TRAV10A0A0B4J240 114 aa5.39□□□□□ -1.55
PDE6A-205ENST00000617647 CHKB-CPT1BH3BT56 60 aa5.39□□□□□ -1.55
PDE6A-205ENST00000617647 PRYO14603 147 aa5.39□□□□□ -1.55
PDE6A-205ENST00000617647 IGHV3-53P01767 116 aa5.39□□□□□ -1.55
PDE6A-205ENST00000617647 NANOS2P60321 138 aaKnown RBP5.38□□□□□ -1.55
PDE6A-205ENST00000617647 DKK4Q9UBT3 224 aa5.38□□□□□ -1.55
PDE6A-205ENST00000617647 LAMA1P25391 3075 aa5.38□□□□□ -1.55
PDE6A-205ENST00000617647 BPY2O14599 106 aa5.38□□□□□ -1.55
PDE6A-205ENST00000617647 UBE2BP63146 152 aa5.38□□□□□ -1.55
PDE6A-205ENST00000617647 LY6EQ16553 131 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 MINOS1Q5TGZ0 78 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 IGHV7-81A0A0B4J1V7 117 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 PROK1P58294 105 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 Q6ZTI0 123 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 FAM19A3Q7Z5A8 133 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 TRBV10-3A0A0K0K1G6 114 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 CFHR3Q02985 330 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 KLKP1Q107X0 134 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 C9orf129Q5T035 196 aaKnown RBP5.37□□□□□ -1.55
PDE6A-205ENST00000617647 TMEM105Q8N8V8 129 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 NPBQ8NG41 125 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 TM2D3Q9BRN9 247 aa5.37□□□□□ -1.55
PDE6A-205ENST00000617647 LYPD5Q6UWN5 251 aa5.36□□□□□ -1.55
PDE6A-205ENST00000617647 Q8N6K4 173 aa5.36□□□□□ -1.55
PDE6A-205ENST00000617647 LINC01547P58512 204 aaPredicted RBP5.36□□□□□ -1.55
PDE6A-205ENST00000617647 LINC00337Q8N6G1 96 aa5.36□□□□□ -1.55
PDE6A-205ENST00000617647 CFAP54Q96N23 3096 aa5.36□□□□□ -1.55
PDE6A-205ENST00000617647 ZNF561-AS1K7EIQ3 104 aa5.36□□□□□ -1.55
PDE6A-205ENST00000617647 LYRM9A8MSI8 78 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 F8W735 103 aaPredicted RBP5.35□□□□□ -1.55
PDE6A-205ENST00000617647 APRG1Q8IVJ8 170 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 UNQ9165/PRO28630Q6UXU0 137 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 MDFIQ99750 246 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 KIF25-AS1Q9Y6Z4 181 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 PRRC2CQ9Y520 2896 aaKnown RBP5.35□□□□□ -1.55
PDE6A-205ENST00000617647 EP300Q09472 2414 aaPredicted RBP5.35□□□□□ -1.55
PDE6A-205ENST00000617647 A6NED7 52 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 INSP01308 110 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 COX6A2Q02221 97 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 CCDC140Q96MF4 163 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 KAAG1Q9UBP8 84 aa5.35□□□□□ -1.55
PDE6A-205ENST00000617647 TRGV1A0A0A0MS02 117 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 LY6HO94772 140 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 AVPP01185 164 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 NDUFA4O00483 81 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 LINC00315P59091 139 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 TNP2Q05952 138 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 Q6ZVQ6 151 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 ZNF575Q86XF7 245 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 ZDBF2Q9HCK1 2354 aa5.34□□□□□ -1.55
PDE6A-205ENST00000617647 UBE2AP49459 152 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms