RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PRORYQ9H606 182 aa10.05□□□□□ -0.8
PPP4R3B-205ENST00000616288 LRCOL1A6NCL2 159 aa10.05□□□□□ -0.8
PPP4R3B-205ENST00000616288 WIPF1O43516 503 aa10.04□□□□□ -0.8
PPP4R3B-205ENST00000616288 BLCAPP62952 87 aa10.04□□□□□ -0.8
PPP4R3B-205ENST00000616288 DKK4Q9UBT3 224 aa10.04□□□□□ -0.8
PPP4R3B-205ENST00000616288 DEFB131AP59861 70 aa10.04□□□□□ -0.8
PPP4R3B-205ENST00000616288 SONP18583 2426 aaKnown RBP10.04□□□□□ -0.8
PPP4R3B-205ENST00000616288 NDUFA1O15239 70 aa10.04□□□□□ -0.8
PPP4R3B-205ENST00000616288 PROK1P58294 105 aa10.04□□□□□ -0.8
PPP4R3B-205ENST00000616288 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
PPP4R3B-205ENST00000616288 INSP01308 110 aa10.03□□□□□ -0.8
PPP4R3B-205ENST00000616288 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
PPP4R3B-205ENST00000616288 ZFAND3Q9H8U3 227 aa10.03□□□□□ -0.8
PPP4R3B-205ENST00000616288 RMI2Q96E14 147 aa10.03□□□□□ -0.8
PPP4R3B-205ENST00000616288 LINC00467Q9BRT7 94 aa10.03□□□□□ -0.8
PPP4R3B-205ENST00000616288 FAM215AQ9Y5M1 114 aa10.03□□□□□ -0.8
PPP4R3B-205ENST00000616288 TRGV4A0A0C4DH28 118 aa10.02□□□□□ -0.8
PPP4R3B-205ENST00000616288 C22orf34Q6ZV56 151 aa10.02□□□□□ -0.8
PPP4R3B-205ENST00000616288 MYO9AB2RTY4 2548 aa10.02□□□□□ -0.8
PPP4R3B-205ENST00000616288 FHL2Q14192 279 aa10.02□□□□□ -0.81
PPP4R3B-205ENST00000616288 Q8N9W7 124 aa10.02□□□□□ -0.81
PPP4R3B-205ENST00000616288 PF4P02776 101 aa10.02□□□□□ -0.81
PPP4R3B-205ENST00000616288 DCANP1Q8TF63 244 aa10.02□□□□□ -0.81
PPP4R3B-205ENST00000616288 MYO15AQ9UKN7 3530 aa10.01□□□□□ -0.81
PPP4R3B-205ENST00000616288 CFHR3Q02985 330 aa10.01□□□□□ -0.81
PPP4R3B-205ENST00000616288 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
PPP4R3B-205ENST00000616288 Q8N2B8 174 aa10.01□□□□□ -0.81
PPP4R3B-205ENST00000616288 C9orf85Q96MD7 179 aa10.01□□□□□ -0.81
PPP4R3B-205ENST00000616288 FUSP35637 526 aaKnown RBP eCLIP10□□□□□ -0.815e-9■□□□□ 8.8
PPP4R3B-205ENST00000616288 SMIM11BQ8TCY0 68 aa10□□□□□ -0.81
PPP4R3B-205ENST00000616288 TMEM256-PLSCR3K7ERE1 68 aa10□□□□□ -0.81
PPP4R3B-205ENST00000616288 MRPS36P82909 103 aaKnown RBP10□□□□□ -0.81
PPP4R3B-205ENST00000616288 MRGPRG-AS1Q2M3A8 158 aa10□□□□□ -0.81
PPP4R3B-205ENST00000616288 USMG5Q96IX5 58 aa10□□□□□ -0.81
PPP4R3B-205ENST00000616288 CHD9Q3L8U1 2897 aa10□□□□□ -0.81
PPP4R3B-205ENST00000616288 A0A087WYN8 130 aa9.99□□□□□ -0.81
PPP4R3B-205ENST00000616288 TRBV6-5A0A0K0K1A5 114 aa9.99□□□□□ -0.81
PPP4R3B-205ENST00000616288 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
PPP4R3B-205ENST00000616288 H3BUX3 64 aa9.99□□□□□ -0.81
PPP4R3B-205ENST00000616288 FAM222AQ5U5X8 452 aa9.99□□□□□ -0.81
PPP4R3B-205ENST00000616288 TRBV7-6A0A0J9YX20 115 aa9.98□□□□□ -0.81
PPP4R3B-205ENST00000616288 CLPSL2Q6UWE3 100 aa9.98□□□□□ -0.81
PPP4R3B-205ENST00000616288 SEM1Q6ZVN7 128 aa9.98□□□□□ -0.81
PPP4R3B-205ENST00000616288 OTOGLQ3ZCN5 2332 aa9.98□□□□□ -0.81
PPP4R3B-205ENST00000616288 TRAV7A0A075B6U4 112 aa9.97□□□□□ -0.81
PPP4R3B-205ENST00000616288 F8WDY8 70 aa9.97□□□□□ -0.81
PPP4R3B-205ENST00000616288 LTBP2Q14767 1821 aa9.97□□□□□ -0.81
PPP4R3B-205ENST00000616288 DSPP15924 2871 aaKnown RBP9.97□□□□□ -0.81
PPP4R3B-205ENST00000616288 F8W735 103 aaPredicted RBP9.97□□□□□ -0.81
PPP4R3B-205ENST00000616288 C10orf142B7Z368 130 aa9.96□□□□□ -0.81
PPP4R3B-205ENST00000616288 MIFP14174 115 aa9.95□□□□□ -0.82
PPP4R3B-205ENST00000616288 RPL28P46779 137 aaKnown RBP9.95□□□□□ -0.82
PPP4R3B-205ENST00000616288 FAM218AQ96MZ4 157 aa9.95□□□□□ -0.82
PPP4R3B-205ENST00000616288 DEFB121Q5J5C9 76 aa9.95□□□□□ -0.82
PPP4R3B-205ENST00000616288 STHQ8IWL8 128 aa9.95□□□□□ -0.82
PPP4R3B-205ENST00000616288 AMELXQ99217 191 aa9.95□□□□□ -0.82
PPP4R3B-205ENST00000616288 CYSTM1Q9H1C7 97 aa9.95□□□□□ -0.82
PPP4R3B-205ENST00000616288 TRANK1O15050 2925 aa9.94□□□□□ -0.82
PPP4R3B-205ENST00000616288 PRR4Q16378 134 aa9.94□□□□□ -0.82
PPP4R3B-205ENST00000616288 CCKP06307 115 aa9.93□□□□□ -0.82
PPP4R3B-205ENST00000616288 IGHV4-28A0A0C4DH34 117 aa9.93□□□□□ -0.82
PPP4R3B-205ENST00000616288 NDUFC1O43677 76 aa9.93□□□□□ -0.82
PPP4R3B-205ENST00000616288 SS18Q15532 418 aa9.93□□□□□ -0.82
PPP4R3B-205ENST00000616288 PRUNE2Q8WUY3 3088 aa9.93□□□□□ -0.82
PPP4R3B-205ENST00000616288 PMAIP1Q13794 54 aa9.93□□□□□ -0.82
PPP4R3B-205ENST00000616288 PRM2P04554 102 aa9.92□□□□□ -0.82
PPP4R3B-205ENST00000616288 LINC00474Q9P2X8 69 aa9.92□□□□□ -0.82
PPP4R3B-205ENST00000616288 GNLYP22749 145 aa9.92□□□□□ -0.82
PPP4R3B-205ENST00000616288 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
PPP4R3B-205ENST00000616288 UBE2D4Q9Y2X8 147 aa9.91□□□□□ -0.82
PPP4R3B-205ENST00000616288 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
PPP4R3B-205ENST00000616288 PSPHP1O15172 72 aa9.9□□□□□ -0.82
PPP4R3B-205ENST00000616288 ATP5EP56381 51 aaPredicted RBP9.9□□□□□ -0.83
PPP4R3B-205ENST00000616288 NREPQ16612 68 aa9.9□□□□□ -0.83
PPP4R3B-205ENST00000616288 IL17DQ8TAD2 202 aa9.9□□□□□ -0.83
PPP4R3B-205ENST00000616288 SETD2Q9BYW2 2564 aaPredicted RBP9.9□□□□□ -0.83
PPP4R3B-205ENST00000616288 COX6A2Q02221 97 aa9.89□□□□□ -0.83
PPP4R3B-205ENST00000616288 BDP1A6H8Y1 2624 aa9.89□□□□□ -0.83
PPP4R3B-205ENST00000616288 A0A087WZ39 114 aa9.89□□□□□ -0.83
PPP4R3B-205ENST00000616288 LY6LH3BQJ8 138 aa9.88□□□□□ -0.83
PPP4R3B-205ENST00000616288 Q8N3U1 123 aa9.88□□□□□ -0.83
PPP4R3B-205ENST00000616288 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
PPP4R3B-205ENST00000616288 ZNF575Q86XF7 245 aa9.88□□□□□ -0.83
PPP4R3B-205ENST00000616288 SIRPDQ9H106 197 aa9.88□□□□□ -0.83
PPP4R3B-205ENST00000616288 BPESC1Q9GZL8 116 aa9.87□□□□□ -0.83
PPP4R3B-205ENST00000616288 KIF25-AS1Q9Y6Z4 181 aa9.87□□□□□ -0.83
PPP4R3B-205ENST00000616288 A0A1W2PNU3 283 aaPredicted RBP9.87□□□□□ -0.83
PPP4R3B-205ENST00000616288 LITAFQ99732 161 aa9.87□□□□□ -0.83
PPP4R3B-205ENST00000616288 CCL18P55774 89 aa9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 TTC28Q96AY4 2481 aa9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 FN1P02751 2386 aaKnown RBP9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 OXTP01178 125 aa9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 RAI1Q7Z5J4 1906 aaPredicted RBP9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 ZNF462Q96JM2 2506 aa9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 C6orf99Q4VX62 202 aa9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 LINC00337Q8N6G1 96 aa9.86□□□□□ -0.83
PPP4R3B-205ENST00000616288 DEFB130BP0DP73 79 aa9.85□□□□□ -0.83
PPP4R3B-205ENST00000616288 DEFB130AP0DP74 79 aa9.85□□□□□ -0.83
PPP4R3B-205ENST00000616288 LINC00315P59091 139 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms