RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 TOMM6Q96B49 74 aa7.13□□□□□ -1.27
LINC00649-217ENST00000616030 MAP1LC3CQ9BXW4 147 aa7.13□□□□□ -1.27
LINC00649-217ENST00000616030 GTSF1LQ9H1H1 148 aa7.13□□□□□ -1.27
LINC00649-217ENST00000616030 CYSLTR1Q9Y271 337 aa7.13□□□□□ -1.27
LINC00649-217ENST00000616030 IGHV3-38A0A0C4DH36 116 aa7.12□□□□□ -1.27
LINC00649-217ENST00000616030 LOC100131303A0A0U1RQF7 123 aa7.12□□□□□ -1.27
LINC00649-217ENST00000616030 K7EP13 123 aa7.12□□□□□ -1.27
LINC00649-217ENST00000616030 TIRAPP58753 221 aa7.12□□□□□ -1.27
LINC00649-217ENST00000616030 SMAGPQ0VAQ4 97 aa7.12□□□□□ -1.27
LINC00649-217ENST00000616030 C20orf203Q8NBC4 194 aa7.12□□□□□ -1.27
LINC00649-217ENST00000616030 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
LINC00649-217ENST00000616030 SCGB3A1Q96QR1 104 aa7.12□□□□□ -1.27
LINC00649-217ENST00000616030 KRTDAPP60985 99 aa7.11□□□□□ -1.27
LINC00649-217ENST00000616030 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
LINC00649-217ENST00000616030 LRP1BQ9NZR2 4599 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 C20orf202A1L168 122 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.1□□□□□ -1.27
LINC00649-217ENST00000616030 H7C423 109 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 SIVA1O15304 175 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 NPSP0C0P6 89 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 C3orf79P0CE67 100 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 TNP2Q05952 138 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 JOSD1Q15040 202 aaPredicted RBP7.1□□□□□ -1.27
LINC00649-217ENST00000616030 LYPD5Q6UWN5 251 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 PET117Q6UWS5 81 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 Q6ZRN7 208 aaPredicted RBP7.1□□□□□ -1.27
LINC00649-217ENST00000616030 ERASQ7Z444 233 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 TIMM17AQ99595 171 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 CHCHD7Q9BUK0 85 aa7.1□□□□□ -1.27
LINC00649-217ENST00000616030 TRBV25-1A0A075B6N4 114 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 LCE2BO14633 110 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 PAPPA-AS1Q5QFB9 102 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 Q6ZN92 141 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 LINC00173Q6ZV60 143 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 SPATA12Q7Z6I5 190 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 DEFB104AQ8WTQ1 72 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 TMEM243Q9BU79 118 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 TIMM21Q9BVV7 248 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 PYGO1Q9Y3Y4 419 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 RYR1P21817 5038 aa7.09□□□□□ -1.27
LINC00649-217ENST00000616030 TRBV6-8A0A0A6YYG3 113 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 IGIPA6NJ69 53 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 SCGB1D1O95968 90 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 PRSS1P07477 247 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 DNAH10OSP0CZ25 163 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 SMIM6P0DI80 62 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 RPL39P62891 51 aaKnown RBP7.08□□□□□ -1.28
LINC00649-217ENST00000616030 NTM-AS1Q6ZSK4 140 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 SPANXA1Q9NS26 97 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 HSPG2P98160 4391 aa7.08□□□□□ -1.28
LINC00649-217ENST00000616030 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
LINC00649-217ENST00000616030 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
LINC00649-217ENST00000616030 UBE2L6O14933 153 aa7.07□□□□□ -1.28
LINC00649-217ENST00000616030 DNAH5Q8TE73 4624 aa7.07□□□□□ -1.28
LINC00649-217ENST00000616030 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.06□□□□□ -1.28
LINC00649-217ENST00000616030 IGKV2-29A2NJV5 120 aaPredicted RBP7.06□□□□□ -1.28
LINC00649-217ENST00000616030 PKIAP61925 76 aa7.06□□□□□ -1.28
LINC00649-217ENST00000616030 PYY3Q5JQD4 70 aa7.06□□□□□ -1.28
LINC00649-217ENST00000616030 DGAT2L7PQ6IED9 249 aa7.06□□□□□ -1.28
LINC00649-217ENST00000616030 MRPL52Q86TS9 123 aaKnown RBP7.06□□□□□ -1.28
LINC00649-217ENST00000616030 UBE2D4Q9Y2X8 147 aa7.06□□□□□ -1.28
LINC00649-217ENST00000616030 CSDC2Q9Y534 153 aaKnown RBP7.06□□□□□ -1.28
LINC00649-217ENST00000616030 ZNF25P17030 456 aaPredicted RBP7.05□□□□□ -1.28
LINC00649-217ENST00000616030 MRPS36P82909 103 aaKnown RBP7.05□□□□□ -1.28
LINC00649-217ENST00000616030 PMVKQ15126 192 aa7.05□□□□□ -1.28
LINC00649-217ENST00000616030 LELP1Q5T871 98 aa7.05□□□□□ -1.28
LINC00649-217ENST00000616030 LINC01545Q5VT33 79 aa7.05□□□□□ -1.28
LINC00649-217ENST00000616030 AMMECR1LQ6DCA0 310 aa7.05□□□□□ -1.28
LINC00649-217ENST00000616030 BAALCQ8WXS3 180 aa7.05□□□□□ -1.28
LINC00649-217ENST00000616030 TMEM101Q96IK0 257 aa7.05□□□□□ -1.28
LINC00649-217ENST00000616030 CHCHD5Q9BSY4 110 aa7.05□□□□□ -1.28
LINC00649-217ENST00000616030 VCX2Q9H322 139 aa7.05□□□□□ -1.28
LINC00649-217ENST00000616030 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 A0A087WX48 190 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 H0Y8G0 127 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 FGF6P10767 208 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 LINC01556Q5JQF7 62 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 NFE4Q86UQ8 179 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 WFDC10BQ8IUB3 73 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 C10orf126Q8N4M7 172 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 Q8N976 141 aa7.04□□□□□ -1.28
LINC00649-217ENST00000616030 APOBP04114 4563 aaKnown RBP7.04□□□□□ -1.28
LINC00649-217ENST00000616030 TRAV9-2A0A087WT02 112 aa7.03□□□□□ -1.28
LINC00649-217ENST00000616030 CDK2AP2O75956 126 aa7.03□□□□□ -1.28
LINC00649-217ENST00000616030 S100A12P80511 92 aa7.03□□□□□ -1.28
LINC00649-217ENST00000616030 GAGE6Q13070 117 aa7.03□□□□□ -1.28
LINC00649-217ENST00000616030 LINC00518Q8N0U6 118 aa7.03□□□□□ -1.28
LINC00649-217ENST00000616030 OR5A1Q8NGJ0 315 aa7.03□□□□□ -1.28
LINC00649-217ENST00000616030 AMELXQ99217 191 aa7.03□□□□□ -1.28
LINC00649-217ENST00000616030 CST9LQ9H4G1 147 aa7.03□□□□□ -1.28
LINC00649-217ENST00000616030 TRAV8-6A0A0B4J262 113 aa7.02□□□□□ -1.29
LINC00649-217ENST00000616030 A0A1B0GUV1 79 aa7.02□□□□□ -1.29
LINC00649-217ENST00000616030 F8VRH5 84 aa7.02□□□□□ -1.29
LINC00649-217ENST00000616030 ODF1Q14990 250 aa7.02□□□□□ -1.29
LINC00649-217ENST00000616030 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
LINC00649-217ENST00000616030 C12orf57Q99622 126 aa7.02□□□□□ -1.29
LINC00649-217ENST00000616030 C2orf88Q9BSF0 95 aa7.02□□□□□ -1.29
LINC00649-217ENST00000616030 CHTOPQ9Y3Y2 248 aaKnown RBP7.02□□□□□ -1.29
LINC00649-217ENST00000616030 C16orf90A8MZG2 172 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms