RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-223	ENST00000615442	RAB5B	P61020	215 aa		7.02	□□□□□ -1.29
PVT1-223	ENST00000615442	RPL39	P62891	51 aa	Known RBP	7.02	□□□□□ -1.29
PVT1-223	ENST00000615442	C2orf66	Q6UXQ4	117 aa		7.02	□□□□□ -1.29
PVT1-223	ENST00000615442	CYSLTR1	Q9Y271	337 aa		7.02	□□□□□ -1.29
PVT1-223	ENST00000615442	PYGO1	Q9Y3Y4	419 aa		7.02	□□□□□ -1.29
PVT1-223	ENST00000615442	PRSS29P	A6NIE9	313 aa		7.01	□□□□□ -1.29
PVT1-223	ENST00000615442	PSCA	O43653	123 aa		7.01	□□□□□ -1.29
PVT1-223	ENST00000615442	NPS	P0C0P6	89 aa		7.01	□□□□□ -1.29
PVT1-223	ENST00000615442	MRPS36	P82909	103 aa	Known RBP	7.01	□□□□□ -1.29
PVT1-223	ENST00000615442	C1orf43	Q9BWL3	253 aa		7.01	□□□□□ -1.29
PVT1-223	ENST00000615442	AP5S1	Q9NUS5	200 aa		7.01	□□□□□ -1.29
PVT1-223	ENST00000615442	IGKV2D-24	A0A075B6R9	120 aa		7	□□□□□ -1.29
PVT1-223	ENST00000615442	CLPSL2	Q6UWE3	100 aa		7	□□□□□ -1.29
PVT1-223	ENST00000615442	TOMM6	Q96B49	74 aa		7	□□□□□ -1.29
PVT1-223	ENST00000615442	KMT2A	Q03164	3969 aa		6.99	□□□□□ -1.29
PVT1-223	ENST00000615442	RYR3	Q15413	4870 aa		6.99	□□□□□ -1.29
PVT1-223	ENST00000615442	IGIP	A6NJ69	53 aa		6.99	□□□□□ -1.29
PVT1-223	ENST00000615442	CCL25	O15444	150 aa		6.99	□□□□□ -1.29
PVT1-223	ENST00000615442	TNP2	Q05952	138 aa		6.99	□□□□□ -1.29
PVT1-223	ENST00000615442	FAM104A	Q969W3	186 aa		6.99	□□□□□ -1.29
PVT1-223	ENST00000615442	CHCHD1	Q96BP2	118 aa	Known RBP	6.99	□□□□□ -1.29
PVT1-223	ENST00000615442	URB1-AS1	Q96HZ7	61 aa		6.99	□□□□□ -1.29
PVT1-223	ENST00000615442	LINC00959	A0A1B0GUT2	108 aa		6.98	□□□□□ -1.29
PVT1-223	ENST00000615442	SS18	Q15532	418 aa		6.98	□□□□□ -1.29
PVT1-223	ENST00000615442	BAGE3	Q86Y29	109 aa		6.98	□□□□□ -1.29
PVT1-223	ENST00000615442	TIMM17A	Q99595	171 aa		6.98	□□□□□ -1.29
PVT1-223	ENST00000615442	DNAH6	Q9C0G6	4158 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	IGLV10-54	A0A075B6I4	117 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	IGLV4-3	A0A075B6K6	122 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442		A0A087WTM6	91 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	IGKV3OR2-268	A0A0C4DH90	116 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	LRCOL1	A6NCL2	159 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	C1orf196	B1AJZ1	125 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	EREG	O14944	169 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	PAPPA-AS1	Q5QFB9	102 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	KRTAP26-1	Q6PEX3	210 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442		Q6ZUT4	128 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	ERAS	Q7Z444	233 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	MAPKAPK5-AS1	Q8N8E1	139 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	TMEM141	Q96I45	108 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	SCGB3A1	Q96QR1	104 aa		6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	OPRPN	Q99935	248 aa	Predicted RBP	6.97	□□□□□ -1.29
PVT1-223	ENST00000615442	HBD	P02042	147 aa		6.96	□□□□□ -1.3
PVT1-223	ENST00000615442	RNASE13	Q5GAN3	156 aa	Known RBP	6.96	□□□□□ -1.3
PVT1-223	ENST00000615442		Q6ZN92	141 aa		6.96	□□□□□ -1.3
PVT1-223	ENST00000615442	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.96	□□□□□ -1.3
PVT1-223	ENST00000615442	VCX2	Q9H322	139 aa		6.96	□□□□□ -1.3
PVT1-223	ENST00000615442		A0A096LNJ9	63 aa		6.95	□□□□□ -1.3
PVT1-223	ENST00000615442	TRAV13-1	A0A0B4J241	112 aa		6.95	□□□□□ -1.3
PVT1-223	ENST00000615442		A0A1B0GVY2	172 aa		6.95	□□□□□ -1.3
PVT1-223	ENST00000615442	GAGE12H	A6NDE8	117 aa		6.95	□□□□□ -1.3
PVT1-223	ENST00000615442	TEX43	Q6ZNM6	134 aa		6.95	□□□□□ -1.3
PVT1-223	ENST00000615442	BAALC	Q8WXS3	180 aa		6.95	□□□□□ -1.3
PVT1-223	ENST00000615442	AMELX	Q99217	191 aa		6.95	□□□□□ -1.3
PVT1-223	ENST00000615442	IFITM10	A6NMD0	228 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BK	O60814	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HSBP1	O75506	76 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BJ	P06899	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BO	P23527	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BB	P33778	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BD	P58876	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BC	P62807	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST2H2BE	Q16778	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	PDZD11	Q5EBL8	140 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	CD164L2	Q6UWJ8	174 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BH	Q93079	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BN	Q99877	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	HIST1H2BM	Q99879	126 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	C2orf88	Q9BSF0	95 aa		6.94	□□□□□ -1.3
PVT1-223	ENST00000615442	SERF1A	O75920	110 aa		6.93	□□□□□ -1.3
PVT1-223	ENST00000615442	XCL1	P47992	114 aa		6.93	□□□□□ -1.3
PVT1-223	ENST00000615442	FOXI1	Q12951	378 aa		6.93	□□□□□ -1.3
PVT1-223	ENST00000615442	PMCHL1	Q16048	86 aa		6.93	□□□□□ -1.3
PVT1-223	ENST00000615442	CFAP161	Q6P656	301 aa		6.93	□□□□□ -1.3
PVT1-223	ENST00000615442		Q8N814	137 aa		6.93	□□□□□ -1.3
PVT1-223	ENST00000615442	PGPEP1	Q9NXJ5	209 aa		6.93	□□□□□ -1.3
PVT1-223	ENST00000615442	USP17L23	D6RBM5	183 aa		6.92	□□□□□ -1.3
PVT1-223	ENST00000615442	ATP5L	O75964	103 aa		6.92	□□□□□ -1.3
PVT1-223	ENST00000615442	LINC00310	P59036	64 aa		6.92	□□□□□ -1.3
PVT1-223	ENST00000615442	C14orf177	Q52M58	125 aa		6.92	□□□□□ -1.3
PVT1-223	ENST00000615442	LINC00173	Q6ZV60	143 aa		6.92	□□□□□ -1.3
PVT1-223	ENST00000615442	FAM19A3	Q7Z5A8	133 aa		6.92	□□□□□ -1.3
PVT1-223	ENST00000615442	LECT2	O14960	151 aa		6.91	□□□□□ -1.3
PVT1-223	ENST00000615442	UBE2D1	P51668	147 aa		6.91	□□□□□ -1.3
PVT1-223	ENST00000615442	SEC11A	P67812	179 aa		6.91	□□□□□ -1.3
PVT1-223	ENST00000615442	WFDC2	Q14508	124 aa		6.91	□□□□□ -1.3
PVT1-223	ENST00000615442	PMVK	Q15126	192 aa		6.91	□□□□□ -1.3
PVT1-223	ENST00000615442	LINC00242	Q5T6M2	205 aa		6.91	□□□□□ -1.3
PVT1-223	ENST00000615442	CST9L	Q9H4G1	147 aa		6.91	□□□□□ -1.3
PVT1-223	ENST00000615442	IGHV3OR16-9	A0A0B4J2B5	98 aa		6.9	□□□□□ -1.3
PVT1-223	ENST00000615442	COX7A2L	O14548	114 aa		6.9	□□□□□ -1.3
PVT1-223	ENST00000615442	NUPR1	O60356	82 aa		6.9	□□□□□ -1.3
PVT1-223	ENST00000615442	ZC2HC1B	Q5TFG8	222 aa		6.9	□□□□□ -1.3
PVT1-223	ENST00000615442	CDPF1	Q6NVV7	123 aa		6.9	□□□□□ -1.3
PVT1-223	ENST00000615442	SPATA12	Q7Z6I5	190 aa		6.9	□□□□□ -1.3
PVT1-223	ENST00000615442	FAM19A2	Q8N3H0	131 aa		6.9	□□□□□ -1.3
PVT1-223	ENST00000615442	NTN5	Q8WTR8	489 aa	Predicted RBP	6.9	□□□□□ -1.3
PVT1-223	ENST00000615442	IGHV1-58	A0A0C4DH39	117 aa		6.89	□□□□□ -1.31

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