RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 CRYGDP07320 174 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 CEMP1Q6PRD7 247 aaPredicted RBP9.67□□□□□ -0.86
FOXN3-219ENST00000615335 DPH3Q96FX2 82 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 WNK1Q9H4A3 2382 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 ATOX1O00244 68 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 NDUFA4O00483 81 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 COX6CP09669 75 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 KRTAP10-3P60369 221 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 KRTAP24-1Q3LI83 254 aa9.67□□□□□ -0.86
FOXN3-219ENST00000615335 UNQ9165/PRO28630Q6UXU0 137 aa9.66□□□□□ -0.86
FOXN3-219ENST00000615335 LENEPQ9Y5L5 61 aa9.66□□□□□ -0.86
FOXN3-219ENST00000615335 H7C2G1 150 aa9.66□□□□□ -0.86
FOXN3-219ENST00000615335 C20orf173Q96LM9 149 aa9.66□□□□□ -0.86
FOXN3-219ENST00000615335 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
FOXN3-219ENST00000615335 HOXD3P31249 432 aaPredicted RBP9.65□□□□□ -0.86
FOXN3-219ENST00000615335 NSUN5P1Q3KNT7 163 aa9.65□□□□□ -0.86
FOXN3-219ENST00000615335 PRR9Q5T870 116 aa9.65□□□□□ -0.86
FOXN3-219ENST00000615335 C2orf66Q6UXQ4 117 aa9.65□□□□□ -0.86
FOXN3-219ENST00000615335 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
FOXN3-219ENST00000615335 GPHB5Q86YW7 130 aa9.65□□□□□ -0.86
FOXN3-219ENST00000615335 LINC00477Q96M19 166 aa9.65□□□□□ -0.86
FOXN3-219ENST00000615335 FBN1P35555 2871 aaKnown RBP9.65□□□□□ -0.87
FOXN3-219ENST00000615335 TRIAP1O43715 76 aa9.64□□□□□ -0.87
FOXN3-219ENST00000615335 LGALS3P17931 250 aaKnown RBP9.64□□□□□ -0.87
FOXN3-219ENST00000615335 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
FOXN3-219ENST00000615335 EIF4EBP3O60516 100 aaPredicted RBP9.64□□□□□ -0.87
FOXN3-219ENST00000615335 SLURP1P55000 103 aa9.64□□□□□ -0.87
FOXN3-219ENST00000615335 SYNJ2BPP57105 145 aa9.64□□□□□ -0.87
FOXN3-219ENST00000615335 J3QQQ9 107 aa9.63□□□□□ -0.87
FOXN3-219ENST00000615335 ZNF22P17026 224 aaPredicted RBP9.63□□□□□ -0.87
FOXN3-219ENST00000615335 TRAV21A0A0B4J279 112 aa9.63□□□□□ -0.87
FOXN3-219ENST00000615335 CCL24O00175 119 aa9.63□□□□□ -0.87
FOXN3-219ENST00000615335 SUMO2P61956 95 aaKnown RBP9.63□□□□□ -0.87
FOXN3-219ENST00000615335 AMELXQ99217 191 aa9.63□□□□□ -0.87
FOXN3-219ENST00000615335 DAZ1Q9NQZ3 744 aaKnown RBP9.63□□□□□ -0.87
FOXN3-219ENST00000615335 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 ZFAND2AQ8N6M9 145 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 TMEM223A0PJW6 202 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 ADARB2-AS1A8MUL3 147 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 M0R381 172 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 S100A4P26447 101 aaKnown RBP9.62□□□□□ -0.87
FOXN3-219ENST00000615335 C4orf26Q17RF5 130 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 ICOSQ9Y6W8 199 aa9.62□□□□□ -0.87
FOXN3-219ENST00000615335 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 HIST1H4AP62805 103 aaKnown RBP9.61□□□□□ -0.87
FOXN3-219ENST00000615335 Q5XG85 94 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 HRCT1Q6UXD1 115 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 SDIM1Q6ZPB5 146 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 hADV29S1A0JD25 119 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 LST1O00453 97 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 SOCS3O14543 225 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 MALP21145 153 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 PRO0628Q9UI54 55 aa9.61□□□□□ -0.87
FOXN3-219ENST00000615335 K7EMT4 169 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 RPL11P62913 178 aaKnown RBP9.6□□□□□ -0.87
FOXN3-219ENST00000615335 DPH3P1Q9H4G8 78 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 STAB1Q9NY15 2570 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 A0A0J9YX75 114 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 SPRY2O43597 315 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 PPP1R17O96001 155 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 EDN2P20800 178 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 TMEM141Q96I45 108 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 PHLDA3Q9Y5J5 127 aa9.6□□□□□ -0.87
FOXN3-219ENST00000615335 LEPROTO15243 131 aa9.59□□□□□ -0.87
FOXN3-219ENST00000615335 DEFB1P60022 68 aa9.59□□□□□ -0.87
FOXN3-219ENST00000615335 C14orf178Q8N769 122 aaPredicted RBP9.59□□□□□ -0.87
FOXN3-219ENST00000615335 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
FOXN3-219ENST00000615335 PEMTQ9UBM1 199 aa9.59□□□□□ -0.87
FOXN3-219ENST00000615335 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
FOXN3-219ENST00000615335 RNASE4P34096 147 aaKnown RBP9.58□□□□□ -0.88
FOXN3-219ENST00000615335 MGPP08493 103 aa9.58□□□□□ -0.88
FOXN3-219ENST00000615335 MED14OSP0DP75 135 aa9.58□□□□□ -0.88
FOXN3-219ENST00000615335 PF4P02776 101 aa9.57□□□□□ -0.88
FOXN3-219ENST00000615335 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
FOXN3-219ENST00000615335 FAM19A4Q96LR4 140 aa9.57□□□□□ -0.88
FOXN3-219ENST00000615335 JPT2Q9H910 190 aa9.57□□□□□ -0.88
FOXN3-219ENST00000615335 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
FOXN3-219ENST00000615335 TRAV13-1A0A0B4J241 112 aa9.57□□□□□ -0.88
FOXN3-219ENST00000615335 F6UB75 175 aa9.57□□□□□ -0.88
FOXN3-219ENST00000615335 SMCR5Q8TEV8 140 aa9.57□□□□□ -0.88
FOXN3-219ENST00000615335 GNRH2O43555 120 aa9.56□□□□□ -0.88
FOXN3-219ENST00000615335 APRG1Q8IVJ8 170 aa9.56□□□□□ -0.88
FOXN3-219ENST00000615335 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
FOXN3-219ENST00000615335 DCANP1Q8TF63 244 aa9.55□□□□□ -0.88
FOXN3-219ENST00000615335 VWFP04275 2813 aa9.55□□□□□ -0.88
FOXN3-219ENST00000615335 RNASE3P12724 160 aaKnown RBP9.55□□□□□ -0.88
FOXN3-219ENST00000615335 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
FOXN3-219ENST00000615335 PYGO1Q9Y3Y4 419 aa9.55□□□□□ -0.88
FOXN3-219ENST00000615335 IGIPA6NJ69 53 aa9.54□□□□□ -0.88
FOXN3-219ENST00000615335 OXTP01178 125 aa9.54□□□□□ -0.88
FOXN3-219ENST00000615335 SERP2Q8N6R1 65 aa9.54□□□□□ -0.88
FOXN3-219ENST00000615335 ZNF876PQ49A33 203 aa9.54□□□□□ -0.88
FOXN3-219ENST00000615335 TRRAPQ9Y4A5 3859 aa9.54□□□□□ -0.88
FOXN3-219ENST00000615335 TSHBP01222 138 aa9.53□□□□□ -0.88
FOXN3-219ENST00000615335 DAND5Q8N907 189 aa9.53□□□□□ -0.88
FOXN3-219ENST00000615335 DSCR8Q96T75 97 aa9.53□□□□□ -0.88
FOXN3-219ENST00000615335 NDUFC2-KCTD14E9PQ53 114 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms