RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CUL9Q8IWT3 2517 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 TRIAP1O43715 76 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 DEFB1P60022 68 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 IGLV2-11P01706 119 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 C11orf71Q6IPW1 123 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 NRGNQ92686 78 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 HIVEP2P31629 2446 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 CEMP1Q6PRD7 247 aaPredicted RBP3.41□□□□□ -1.86
CHD9-221ENST00000615216 SORL1Q92673 2214 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 MRPL55Q7Z7F7 128 aaKnown RBP3.41□□□□□ -1.86
CHD9-221ENST00000615216 NRACQ8N912 160 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 USP17L23D6RBM5 183 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 CSPG4Q6UVK1 2322 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 SDIM1Q6ZPB5 146 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 Q6ZPA2 131 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 CDKN2A-AS1Q9UH64 79 aa3.4□□□□□ -1.86
CHD9-221ENST00000615216 CASC2Q6XLA1 102 aa3.4□□□□□ -1.86
CHD9-221ENST00000615216 PSMG3-AS1Q96PY0 264 aa3.4□□□□□ -1.86
CHD9-221ENST00000615216 MT-ATP8P03928 68 aa3.4□□□□□ -1.86
CHD9-221ENST00000615216 ATRXP46100 2492 aa3.4□□□□□ -1.86
CHD9-221ENST00000615216 TSHBP01222 138 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 CD164L2Q6UWJ8 174 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 PTH2Q96A98 100 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 PCSK5Q92824 1860 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 LINC01548A6NM66 108 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 K7ERS5 55 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 MRGPRG-AS1Q2M3A8 158 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 DEFB131BA0A096LNP1 70 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 CRIP1P50238 77 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 Q8N6K4 173 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 FAM19A1Q7Z5A9 133 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 RNF183Q96D59 192 aa3.4□□□□□ -1.87
CHD9-221ENST00000615216 ENHOQ6UWT2 76 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 CNFNQ9BYD5 112 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 KLLNB2CW77 178 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 C9orf85Q96MD7 179 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 TRAV10A0A0B4J240 114 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 M0R378 163 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 C7orf33Q8WU49 177 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 LINC00474Q9P2X8 69 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 FAM240AA0A1B0GVK7 77 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 SHISA2Q6UWI4 295 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 C1orf229Q6ZS94 237 aaPredicted RBP3.39□□□□□ -1.87
CHD9-221ENST00000615216 LST1O00453 97 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 LELP1Q5T871 98 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
CHD9-221ENST00000615216 NDUFA7O95182 113 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 SYCNQ0VAF6 134 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 UBE2D1P51668 147 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 UBE2D4Q9Y2X8 147 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 IGKV2-24A0A0C4DH68 120 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 LOC107984640A0A0U1RRK4 108 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 PRB2P02812 416 aaPredicted RBP3.38□□□□□ -1.87
CHD9-221ENST00000615216 ZNF702PQ9H963 129 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 A0A087WZ39 114 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 MAPKAPK5-AS1Q8N8E1 139 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 C2orf91Q6ZV80 131 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 HIGD2AQ9BW72 106 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 IGLV1-40P01703 118 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 Q8IZM0 81 aa3.38□□□□□ -1.87
CHD9-221ENST00000615216 RNASE3P12724 160 aaKnown RBP3.37□□□□□ -1.87
CHD9-221ENST00000615216 ZFHX2Q9C0A1 2572 aaPredicted RBP3.37□□□□□ -1.87
CHD9-221ENST00000615216 SVIPQ8NHG7 77 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 IGLV4-69A0A075B6H9 119 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.37□□□□□ -1.87
CHD9-221ENST00000615216 Q6ZSV7 163 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 C20orf197Q8N268 126 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 CCKP06307 115 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 FAM19A5Q7Z5A7 132 aaPredicted RBP3.37□□□□□ -1.87
CHD9-221ENST00000615216 OTOGLQ3ZCN5 2332 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 F8WDY8 70 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 Q6JHZ5 121 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 C19orf84I3L1E1 186 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 PLA2G5P39877 138 aa3.37□□□□□ -1.87
CHD9-221ENST00000615216 WFDC10BQ8IUB3 73 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 DCANP1Q8TF63 244 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 MRPS12O15235 138 aaKnown RBP3.36□□□□□ -1.87
CHD9-221ENST00000615216 SLPIP03973 132 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 Q6Q795 121 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 SPTSSBQ8NFR3 76 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 WFDC11Q8NEX6 87 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 RBX1P62877 108 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 SPG11Q96JI7 2443 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 LINC00959A0A1B0GUT2 108 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 POLR2KP53803 58 aaKnown RBP3.36□□□□□ -1.87
CHD9-221ENST00000615216 C6orf99Q4VX62 202 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 UBE2D3P61077 147 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 UBE2D2P62837 147 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 MPLKIPQ8TAP9 179 aa3.36□□□□□ -1.87
CHD9-221ENST00000615216 ZNF73O43830 326 aaPredicted RBP3.35□□□□□ -1.87
CHD9-221ENST00000615216 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.35□□□□□ -1.87
CHD9-221ENST00000615216 SMIM11BQ8TCY0 68 aa3.35□□□□□ -1.87
CHD9-221ENST00000615216 PTPN13Q12923 2485 aa3.35□□□□□ -1.87
CHD9-221ENST00000615216 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
CHD9-221ENST00000615216 PRR9Q5T870 116 aa3.35□□□□□ -1.87
CHD9-221ENST00000615216 ZNF580Q9UK33 172 aa3.35□□□□□ -1.87
CHD9-221ENST00000615216 COX7CP15954 63 aa3.35□□□□□ -1.87
CHD9-221ENST00000615216 CHCHD7Q9BUK0 85 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 233 ms