RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 LAGE3Q14657 143 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 NFE4Q86UQ8 179 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 FGF6P10767 208 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 COTL1Q14019 142 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 HIGD2BQ4VC39 106 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 FAM104BQ5XKR9 115 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 IMMP2LQ96T52 175 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 TRAV8-3A0A0A6YYJ7 113 aa3.69□□□□□ -1.82
CPNE3-208ENST00000614678 LOC389332A0A1B0GUA5 103 aa3.69□□□□□ -1.82
CPNE3-208ENST00000614678 PMCHP20382 165 aa3.69□□□□□ -1.82
CPNE3-208ENST00000614678 C1orf43Q9BWL3 253 aa3.69□□□□□ -1.82
CPNE3-208ENST00000614678 CDK2AP2O75956 126 aa3.69□□□□□ -1.82
CPNE3-208ENST00000614678 CRPP02741 224 aa3.69□□□□□ -1.82
CPNE3-208ENST00000614678 FABP9Q0Z7S8 132 aa3.69□□□□□ -1.82
CPNE3-208ENST00000614678 UQCC3Q6UW78 93 aa3.69□□□□□ -1.82
CPNE3-208ENST00000614678 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.69□□□□□ -1.82
CPNE3-208ENST00000614678 H7C1H1 209 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 ESDP10768 282 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 XCL1P47992 114 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 ST20Q9HBF5 79 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 GAGE12HA6NDE8 117 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 I3L3M4 83 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 TNFRSF6BO95407 300 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 C15orf56Q8N910 161 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 CKS2P33552 79 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 SUMO2P61956 95 aaKnown RBP3.68□□□□□ -1.82
CPNE3-208ENST00000614678 Q6ZUT4 128 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 SCXQ7RTU7 201 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 DMBT1Q9UGM3 2413 aaPredicted RBP3.68□□□□□ -1.82
CPNE3-208ENST00000614678 TRBV27A0A0K0K1C4 114 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 UBE2L6O14933 153 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 HBBP68871 147 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 RIGQ13278 110 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 Q8N1X5 172 aa3.68□□□□□ -1.82
CPNE3-208ENST00000614678 TRBV6-5A0A0K0K1A5 114 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 APCSP02743 223 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
CPNE3-208ENST00000614678 BORCS7Q96B45 105 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 Q5VSD8 79 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 SMIM15Q7Z3B0 74 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 CIRBP-AS1Q8TBR5 109 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
CPNE3-208ENST00000614678 SEC11CQ9BY50 192 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 CHTOPQ9Y3Y2 248 aaKnown RBP3.67□□□□□ -1.82
CPNE3-208ENST00000614678 A0A1B0GUV1 79 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 K7EP13 123 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 NPSP0C0P6 89 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 DDTP30046 118 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 ODF1Q14990 250 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 KCNIP4Q6PIL6 250 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 UBE2D4Q9Y2X8 147 aa3.67□□□□□ -1.82
CPNE3-208ENST00000614678 TRAV13-1A0A0B4J241 112 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 hDV102S1A0JD36 115 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 CCL25O15444 150 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 MIAQ16674 131 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 AMMECR1LQ6DCA0 310 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 CDC42SE2Q9NRR3 84 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 PKHD1L1Q86WI1 4243 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 FOXI1Q12951 378 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 TM2D2Q9BX73 214 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 LINC00959A0A1B0GUT2 108 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 HNRNPA3P51991 378 aaKnown RBP3.66□□□□□ -1.82
CPNE3-208ENST00000614678 TMEM136Q6ZRR5 245 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 Q6ZSA8 131 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 SVBPQ8N300 66 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 MRAP2Q96G30 205 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 SMDT1Q9H4I9 107 aa3.66□□□□□ -1.82
CPNE3-208ENST00000614678 C7orf77A4D0Y5 90 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 PRSS3P2Q8NHM4 247 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 SNHG12Q9BXW3 62 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 CBY1Q9Y3M2 126 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 TGIF2-C20orf24A0A0A6YYL0 155 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 A0A0J9YXV3 536 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 PTTG1IPP53801 180 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 Q0VG73 95 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 C5orf38Q86SI9 138 aa3.65□□□□□ -1.82
CPNE3-208ENST00000614678 TRBV24-1A0A075B6N3 115 aa3.65□□□□□ -1.83
CPNE3-208ENST00000614678 FCER1GP30273 86 aa3.65□□□□□ -1.83
CPNE3-208ENST00000614678 IFI27P40305 119 aaPredicted RBP3.65□□□□□ -1.83
CPNE3-208ENST00000614678 COX6A2Q02221 97 aa3.65□□□□□ -1.83
CPNE3-208ENST00000614678 PRELID3AQ96N28 172 aa3.65□□□□□ -1.83
CPNE3-208ENST00000614678 SMIM2Q9BVW6 85 aa3.65□□□□□ -1.83
CPNE3-208ENST00000614678 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
CPNE3-208ENST00000614678 SDIM1Q6ZPB5 146 aa3.65□□□□□ -1.83
CPNE3-208ENST00000614678 VCYO14598 125 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 ZNF664Q8N3J9 261 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 DLEU1O43261 78 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 MT-ND4LP03901 98 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 HIST3H2BBQ8N257 126 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 RPS10P5Q9NQ39 176 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 IGKV2-24A0A0C4DH68 120 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 EPM2AB3EWF7 344 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 LINC00614P0C842 121 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 PKIAP61925 76 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 CFAP161Q6P656 301 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 OR5A1Q8NGJ0 315 aa3.64□□□□□ -1.83
CPNE3-208ENST00000614678 ELOBQ15370 118 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 PMCHL1Q16048 86 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms