RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 TEN1Q86WV5 123 aa9.12□□□□□ -0.95
CCL4-201ENST00000613947 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
CCL4-201ENST00000613947 LINC01549A6NIU2 74 aa9.12□□□□□ -0.95
CCL4-201ENST00000613947 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
CCL4-201ENST00000613947 FAM159AQ6UWV7 190 aa9.12□□□□□ -0.95
CCL4-201ENST00000613947 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
CCL4-201ENST00000613947 GAS8-AS1O95177 125 aa9.11□□□□□ -0.95
CCL4-201ENST00000613947 DEFB130BP0DP73 79 aa9.11□□□□□ -0.95
CCL4-201ENST00000613947 DEFB130AP0DP74 79 aa9.11□□□□□ -0.95
CCL4-201ENST00000613947 CEMP1Q6PRD7 247 aaPredicted RBP9.11□□□□□ -0.95
CCL4-201ENST00000613947 TOMM6Q96B49 74 aa9.11□□□□□ -0.95
CCL4-201ENST00000613947 SPANXA1Q9NS26 97 aa9.11□□□□□ -0.95
CCL4-201ENST00000613947 C11orf21Q9P2W6 132 aa9.11□□□□□ -0.95
CCL4-201ENST00000613947 SACSQ9NZJ4 4579 aa9.1□□□□□ -0.95
CCL4-201ENST00000613947 GNRH2O43555 120 aa9.1□□□□□ -0.95
CCL4-201ENST00000613947 DAD1P61803 113 aa9.1□□□□□ -0.95
CCL4-201ENST00000613947 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
CCL4-201ENST00000613947 MDFICQ9P1T7 246 aa9.1□□□□□ -0.95
CCL4-201ENST00000613947 NUPR2A6NF83 97 aa9.09□□□□□ -0.95
CCL4-201ENST00000613947 GATA1P15976 413 aaPredicted RBP9.09□□□□□ -0.95
CCL4-201ENST00000613947 DAZ2Q13117 558 aaKnown RBP9.09□□□□□ -0.95
CCL4-201ENST00000613947 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
CCL4-201ENST00000613947 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
CCL4-201ENST00000613947 SMIM2Q9BVW6 85 aa9.09□□□□□ -0.95
CCL4-201ENST00000613947 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
CCL4-201ENST00000613947 DEFB131BA0A096LNP1 70 aa9.08□□□□□ -0.96
CCL4-201ENST00000613947 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
CCL4-201ENST00000613947 IGKV3D-20A0A0C4DH25 116 aa9.08□□□□□ -0.96
CCL4-201ENST00000613947 MT-ATP8P03928 68 aa9.08□□□□□ -0.96
CCL4-201ENST00000613947 XGP55808 180 aa9.08□□□□□ -0.96
CCL4-201ENST00000613947 Q6ZTI0 123 aa9.08□□□□□ -0.96
CCL4-201ENST00000613947 CARD19Q96LW7 228 aa9.08□□□□□ -0.96
CCL4-201ENST00000613947 TRGV11A0A075B6L2 103 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 IGHV3-16A0A0C4DH30 117 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 A8MWV9 139 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 M0R381 172 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 ASIPP42127 132 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 GAGE5Q13069 117 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 GAGE6Q13070 117 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 LINC00612Q8N6U2 182 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 SCGB3A1Q96QR1 104 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 KLK5Q9Y337 293 aaPredicted RBP9.07□□□□□ -0.96
CCL4-201ENST00000613947 MUC4Q99102 2169 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 TRGV1A0A0A0MS02 117 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 GAGE7O76087 117 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 PPP1R17O96001 155 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 GAGE12FP0CL80 117 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 GAGE12GP0CL81 117 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 GAGE12IP0CL82 117 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 HTN3P15516 51 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 PRADC1Q9BSG0 188 aa9.07□□□□□ -0.96
CCL4-201ENST00000613947 PSMB2P49721 201 aa9.06□□□□□ -0.96
CCL4-201ENST00000613947 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
CCL4-201ENST00000613947 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
CCL4-201ENST00000613947 Q6Q795 121 aa9.05□□□□□ -0.96
CCL4-201ENST00000613947 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
CCL4-201ENST00000613947 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
CCL4-201ENST00000613947 MED14OSP0DP75 135 aa9.04□□□□□ -0.96
CCL4-201ENST00000613947 HERVK_113P61574 105 aa9.04□□□□□ -0.96
CCL4-201ENST00000613947 ANAPC13Q9BS18 74 aa9.04□□□□□ -0.96
CCL4-201ENST00000613947 TRGV2A0A075B6R0 118 aa9.04□□□□□ -0.96
CCL4-201ENST00000613947 ATP5G1P05496 136 aa9.04□□□□□ -0.96
CCL4-201ENST00000613947 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
CCL4-201ENST00000613947 SRSF9Q13242 221 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCL4-201ENST00000613947 BAALCQ8WXS3 180 aa9.04□□□□□ -0.96
CCL4-201ENST00000613947 SPXQ9BT56 116 aa9.04□□□□□ -0.96
CCL4-201ENST00000613947 VPS13DQ5THJ4 4388 aa9.03□□□□□ -0.96
CCL4-201ENST00000613947 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
CCL4-201ENST00000613947 F5H768 121 aa9.03□□□□□ -0.96
CCL4-201ENST00000613947 RNASE3P12724 160 aaKnown RBP9.03□□□□□ -0.96
CCL4-201ENST00000613947 SPANXN1Q5VSR9 72 aa9.03□□□□□ -0.96
CCL4-201ENST00000613947 SCGB1D4Q6XE38 83 aa9.03□□□□□ -0.96
CCL4-201ENST00000613947 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
CCL4-201ENST00000613947 C10orf126Q8N4M7 172 aa9.03□□□□□ -0.96
CCL4-201ENST00000613947 RASL10AQ92737 203 aa9.03□□□□□ -0.96
CCL4-201ENST00000613947 A0A0J9YY99 117 aa9.02□□□□□ -0.97
CCL4-201ENST00000613947 M0R2P5 195 aa9.02□□□□□ -0.97
CCL4-201ENST00000613947 RHODO00212 210 aa9.02□□□□□ -0.97
CCL4-201ENST00000613947 ZFP2Q6ZN57 461 aa9.02□□□□□ -0.97
CCL4-201ENST00000613947 POM121L12Q8N7R1 296 aa9.02□□□□□ -0.97
CCL4-201ENST00000613947 RYR3Q15413 4870 aa9.02□□□□□ -0.97
CCL4-201ENST00000613947 NACAE9PAV3 2078 aa9.02□□□□□ -0.97
CCL4-201ENST00000613947 PRSS29PA6NIE9 313 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 TCL1BO95988 128 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 S100A4P26447 101 aaKnown RBP9.01□□□□□ -0.97
CCL4-201ENST00000613947 C9orf85Q96MD7 179 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 P0DMU3 169 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 FAM231AP0DMU4 169 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 FAM231CP0DMU5 169 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 C2orf66Q6UXQ4 117 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 SLC25A29Q8N8R3 303 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 APLNQ9ULZ1 77 aa9.01□□□□□ -0.97
CCL4-201ENST00000613947 HYDINQ4G0P3 5121 aa9□□□□□ -0.97
CCL4-201ENST00000613947 IGHV3-53P01767 116 aa9□□□□□ -0.97
CCL4-201ENST00000613947 IGHV3-30P01768 117 aa9□□□□□ -0.97
CCL4-201ENST00000613947 SCGB1C2P0DMR2 95 aa9□□□□□ -0.97
CCL4-201ENST00000613947 IGHV3-30-5P0DP03 117 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms