RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 YPEL4Q96NS1 127 aa11□□□□□ -0.65
IRF1-211ENST00000613424 UBE2D4Q9Y2X8 147 aa11□□□□□ -0.65
IRF1-211ENST00000613424 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
IRF1-211ENST00000613424 WFDC2Q14508 124 aa10.99□□□□□ -0.65
IRF1-211ENST00000613424 KRTAP26-1Q6PEX3 210 aa10.99□□□□□ -0.65
IRF1-211ENST00000613424 ALKBH7Q9BT30 221 aaPredicted RBP10.99□□□□□ -0.65
IRF1-211ENST00000613424 CDC42SE2Q9NRR3 84 aa10.99□□□□□ -0.65
IRF1-211ENST00000613424 TRAPPC1Q9Y5R8 145 aa10.99□□□□□ -0.65
IRF1-211ENST00000613424 IGKV3OR2-268A0A0C4DH90 116 aa10.98□□□□□ -0.65
IRF1-211ENST00000613424 LECT2O14960 151 aa10.98□□□□□ -0.65
IRF1-211ENST00000613424 FUSP35637 526 aaKnown RBP eCLIP10.98□□□□□ -0.65
IRF1-211ENST00000613424 IFI27P40305 119 aaPredicted RBP10.98□□□□□ -0.65
IRF1-211ENST00000613424 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
IRF1-211ENST00000613424 SMAGPQ0VAQ4 97 aa10.98□□□□□ -0.65
IRF1-211ENST00000613424 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
IRF1-211ENST00000613424 CBLN2Q8IUK8 224 aa10.98□□□□□ -0.65
IRF1-211ENST00000613424 ZNF664Q8N3J9 261 aa10.98□□□□□ -0.65
IRF1-211ENST00000613424 SMCO4Q9NRQ5 59 aa10.98□□□□□ -0.65
IRF1-211ENST00000613424 PGPEP1Q9NXJ5 209 aa10.98□□□□□ -0.65
IRF1-211ENST00000613424 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
IRF1-211ENST00000613424 LRP1BQ9NZR2 4599 aa10.97□□□□□ -0.65
IRF1-211ENST00000613424 Q8N814 137 aa10.97□□□□□ -0.65
IRF1-211ENST00000613424 TIMM21Q9BVV7 248 aa10.97□□□□□ -0.65
IRF1-211ENST00000613424 NXT2Q9NPJ8 142 aaKnown RBP10.97□□□□□ -0.65
IRF1-211ENST00000613424 C16orf90A8MZG2 172 aa10.95□□□□□ -0.66
IRF1-211ENST00000613424 K7EMI3 77 aa10.94□□□□□ -0.66
IRF1-211ENST00000613424 ORMDL2Q53FV1 153 aa10.94□□□□□ -0.66
IRF1-211ENST00000613424 PRSS3P2Q8NHM4 247 aa10.94□□□□□ -0.66
IRF1-211ENST00000613424 LINC00959A0A1B0GUT2 108 aa10.93□□□□□ -0.66
IRF1-211ENST00000613424 RNASE13Q5GAN3 156 aaKnown RBP10.93□□□□□ -0.66
IRF1-211ENST00000613424 CHCHD10Q8WYQ3 142 aaPredicted RBP10.93□□□□□ -0.66
IRF1-211ENST00000613424 FAM104AQ969W3 186 aa10.93□□□□□ -0.66
IRF1-211ENST00000613424 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
IRF1-211ENST00000613424 GAGE12HA6NDE8 117 aa10.92□□□□□ -0.66
IRF1-211ENST00000613424 CDPF1Q6NVV7 123 aa10.92□□□□□ -0.66
IRF1-211ENST00000613424 Q6ZUT4 128 aa10.92□□□□□ -0.66
IRF1-211ENST00000613424 OPRPNQ99935 248 aaPredicted RBP10.92□□□□□ -0.66
IRF1-211ENST00000613424 USP17L23D6RBM5 183 aa10.91□□□□□ -0.66
IRF1-211ENST00000613424 MRPS36P82909 103 aaKnown RBP10.91□□□□□ -0.66
IRF1-211ENST00000613424 C2orf66Q6UXQ4 117 aa10.91□□□□□ -0.66
IRF1-211ENST00000613424 NTN5Q8WTR8 489 aaPredicted RBP10.91□□□□□ -0.66
IRF1-211ENST00000613424 PYGO1Q9Y3Y4 419 aa10.91□□□□□ -0.66
IRF1-211ENST00000613424 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.9□□□□□ -0.66
IRF1-211ENST00000613424 SS18Q15532 418 aa10.9□□□□□ -0.66
IRF1-211ENST00000613424 CYSLTR1Q9Y271 337 aa10.9□□□□□ -0.66
IRF1-211ENST00000613424 IGLV5-52A0A0A0MRZ9 124 aa10.89□□□□□ -0.67
IRF1-211ENST00000613424 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
IRF1-211ENST00000613424 CCL25O15444 150 aa10.89□□□□□ -0.67
IRF1-211ENST00000613424 XCL1P47992 114 aa10.89□□□□□ -0.67
IRF1-211ENST00000613424 C14orf177Q52M58 125 aa10.89□□□□□ -0.67
IRF1-211ENST00000613424 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
IRF1-211ENST00000613424 G0S2P27469 103 aa10.88□□□□□ -0.67
IRF1-211ENST00000613424 FOXI1Q12951 378 aa10.88□□□□□ -0.67
IRF1-211ENST00000613424 C18orf32Q8TCD1 76 aa10.88□□□□□ -0.67
IRF1-211ENST00000613424 IGLV4-3A0A075B6K6 122 aa10.87□□□□□ -0.67
IRF1-211ENST00000613424 C1orf196B1AJZ1 125 aa10.87□□□□□ -0.67
IRF1-211ENST00000613424 PRSS1P07477 247 aa10.87□□□□□ -0.67
IRF1-211ENST00000613424 GCSHP23434 173 aa10.87□□□□□ -0.67
IRF1-211ENST00000613424 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
IRF1-211ENST00000613424 IGIPA6NJ69 53 aa10.86□□□□□ -0.67
IRF1-211ENST00000613424 COLCA2A8K830 154 aa10.86□□□□□ -0.67
IRF1-211ENST00000613424 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
IRF1-211ENST00000613424 TOMM6Q96B49 74 aa10.86□□□□□ -0.67
IRF1-211ENST00000613424 TMEM141Q96I45 108 aa10.86□□□□□ -0.67
IRF1-211ENST00000613424 DNAH8Q96JB1 4490 aa10.85□□□□□ -0.67
IRF1-211ENST00000613424 SCO1O75880 301 aa10.85□□□□□ -0.67
IRF1-211ENST00000613424 LINC00614P0C842 121 aa10.85□□□□□ -0.67
IRF1-211ENST00000613424 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
IRF1-211ENST00000613424 URB1-AS1Q96HZ7 61 aa10.85□□□□□ -0.67
IRF1-211ENST00000613424 APOBP04114 4563 aaKnown RBP10.85□□□□□ -0.67
IRF1-211ENST00000613424 TRGC2P03986 189 aa10.84□□□□□ -0.67
IRF1-211ENST00000613424 CFAP161Q6P656 301 aa10.84□□□□□ -0.67
IRF1-211ENST00000613424 KIAA1109Q2LD37 5005 aa10.83□□□□□ -0.68
IRF1-211ENST00000613424 IFITM10A6NMD0 228 aa10.83□□□□□ -0.68
IRF1-211ENST00000613424 NPSP0C0P6 89 aa10.83□□□□□ -0.68
IRF1-211ENST00000613424 C15orf56Q8N910 161 aa10.83□□□□□ -0.68
IRF1-211ENST00000613424 AP5S1Q9NUS5 200 aa10.83□□□□□ -0.68
IRF1-211ENST00000613424 hDV102S1A0JD36 115 aa10.82□□□□□ -0.68
IRF1-211ENST00000613424 ZC2HC1BQ5TFG8 222 aa10.82□□□□□ -0.68
IRF1-211ENST00000613424 TEX43Q6ZNM6 134 aa10.82□□□□□ -0.68
IRF1-211ENST00000613424 ERASQ7Z444 233 aa10.82□□□□□ -0.68
IRF1-211ENST00000613424 SCGB3A1Q96QR1 104 aa10.82□□□□□ -0.68
IRF1-211ENST00000613424 AMELXQ99217 191 aa10.82□□□□□ -0.68
IRF1-211ENST00000613424 TIMM17AQ99595 171 aa10.82□□□□□ -0.68
IRF1-211ENST00000613424 VCX2Q9H322 139 aa10.82□□□□□ -0.68
IRF1-211ENST00000613424 RAB5BP61020 215 aa10.81□□□□□ -0.68
IRF1-211ENST00000613424 Q6ZN92 141 aa10.81□□□□□ -0.68
IRF1-211ENST00000613424 RYR1P21817 5038 aa10.8□□□□□ -0.68
IRF1-211ENST00000613424 LINC01549A6NIU2 74 aa10.8□□□□□ -0.68
IRF1-211ENST00000613424 COX7A2LO14548 114 aa10.8□□□□□ -0.68
IRF1-211ENST00000613424 LINC01620Q4KN68 170 aa10.8□□□□□ -0.68
IRF1-211ENST00000613424 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
IRF1-211ENST00000613424 C5orf38Q86SI9 138 aa10.8□□□□□ -0.68
IRF1-211ENST00000613424 A0A096LNJ9 63 aa10.79□□□□□ -0.68
IRF1-211ENST00000613424 IGHV1-58A0A0C4DH39 117 aa10.79□□□□□ -0.68
IRF1-211ENST00000613424 SLPIP03973 132 aa10.79□□□□□ -0.68
IRF1-211ENST00000613424 HIGD2BQ4VC39 106 aa10.79□□□□□ -0.68
IRF1-211ENST00000613424 PAPPA-AS1Q5QFB9 102 aa10.79□□□□□ -0.68
IRF1-211ENST00000613424 C2orf88Q9BSF0 95 aa10.79□□□□□ -0.68
IRF1-211ENST00000613424 HSPG2P98160 4391 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms