RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
HPS1-215ENST00000613394 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
HPS1-215ENST00000613394 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
HPS1-215ENST00000613394 CLUHP3Q96NS8 147 aa10.11□□□□□ -0.79
HPS1-215ENST00000613394 TMEM101Q96IK0 257 aa10.1□□□□□ -0.79
HPS1-215ENST00000613394 Q96MF0 132 aa10.1□□□□□ -0.79
HPS1-215ENST00000613394 PRORYQ9H606 182 aa10.1□□□□□ -0.79
HPS1-215ENST00000613394 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
HPS1-215ENST00000613394 KLK9Q2XQG4 91 aa10.09□□□□□ -0.79
HPS1-215ENST00000613394 CHCHD5Q9BSY4 110 aa10.09□□□□□ -0.79
HPS1-215ENST00000613394 TRGV4A0A0C4DH28 118 aa10.09□□□□□ -0.79
HPS1-215ENST00000613394 SS18L2Q9UHA2 77 aa10.09□□□□□ -0.79
HPS1-215ENST00000613394 USP24Q9UPU5 2620 aa10.09□□□□□ -0.79
HPS1-215ENST00000613394 FASNP49327 2511 aaKnown RBP10.09□□□□□ -0.79
HPS1-215ENST00000613394 LINC00158P58513 81 aa10.09□□□□□ -0.79
HPS1-215ENST00000613394 MAP6D1Q9H9H5 199 aa10.09□□□□□ -0.79
HPS1-215ENST00000613394 SPANXA1Q9NS26 97 aa10.09□□□□□ -0.79
HPS1-215ENST00000613394 A0A0B4J2C4 111 aa10.08□□□□□ -0.8
HPS1-215ENST00000613394 POM121L12Q8N7R1 296 aa10.08□□□□□ -0.8
HPS1-215ENST00000613394 VSIG2Q96IQ7 327 aa10.08□□□□□ -0.8
HPS1-215ENST00000613394 GAGE6Q13070 117 aa10.08□□□□□ -0.8
HPS1-215ENST00000613394 ODF3Q96PU9 254 aa10.08□□□□□ -0.8
HPS1-215ENST00000613394 FHL3Q13643 280 aa10.08□□□□□ -0.8
HPS1-215ENST00000613394 C3orf56Q8N813 242 aa10.07□□□□□ -0.8
HPS1-215ENST00000613394 FLNAP21333 2647 aaKnown RBP10.07□□□□□ -0.8
HPS1-215ENST00000613394 Q6ZTI0 123 aa10.07□□□□□ -0.8
HPS1-215ENST00000613394 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
HPS1-215ENST00000613394 RNASE1P07998 156 aaKnown RBP10.07□□□□□ -0.8
HPS1-215ENST00000613394 PFN2P35080 140 aa10.07□□□□□ -0.8
HPS1-215ENST00000613394 ZNF702PQ9H963 129 aa10.07□□□□□ -0.8
HPS1-215ENST00000613394 TRAV4A0A0B4J268 109 aa10.06□□□□□ -0.8
HPS1-215ENST00000613394 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
HPS1-215ENST00000613394 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
HPS1-215ENST00000613394 MIAQ16674 131 aa10.06□□□□□ -0.8
HPS1-215ENST00000613394 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
HPS1-215ENST00000613394 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
HPS1-215ENST00000613394 RS1O15537 224 aa10.06□□□□□ -0.8
HPS1-215ENST00000613394 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
HPS1-215ENST00000613394 CELSR2Q9HCU4 2923 aa10.05□□□□□ -0.8
HPS1-215ENST00000613394 DNAL4O96015 105 aa10.05□□□□□ -0.8
HPS1-215ENST00000613394 AMELXQ99217 191 aa10.05□□□□□ -0.8
HPS1-215ENST00000613394 UBE2D4Q9Y2X8 147 aa10.05□□□□□ -0.8
HPS1-215ENST00000613394 FBN2P35556 2912 aa10.04□□□□□ -0.8
HPS1-215ENST00000613394 MRPS36P82909 103 aaKnown RBP10.04□□□□□ -0.8
HPS1-215ENST00000613394 NF1P21359 2839 aa10.04□□□□□ -0.8
HPS1-215ENST00000613394 TINCRA0A1B0GVN0 87 aa10.04□□□□□ -0.8
HPS1-215ENST00000613394 KRTAP10-9P60411 292 aa10.04□□□□□ -0.8
HPS1-215ENST00000613394 A0A096LPF7 62 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 J3QLI3 93 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 HERVK_113P63121 156 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 COX6A2Q02221 97 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 CLPSL2Q6UWE3 100 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 CRLF1O75462 422 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 IFITM1P13164 125 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 PIK3CD-AS1Q5SR53 167 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 CHCHD7Q9BUK0 85 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 WFDC10AQ9H1F0 79 aa10.03□□□□□ -0.8
HPS1-215ENST00000613394 PAX4O43316 350 aa10.02□□□□□ -0.81
HPS1-215ENST00000613394 Q6YL49 198 aa10.02□□□□□ -0.81
HPS1-215ENST00000613394 PYGO1Q9Y3Y4 419 aa10.02□□□□□ -0.81
HPS1-215ENST00000613394 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
HPS1-215ENST00000613394 DEFB114Q30KQ6 69 aa10.02□□□□□ -0.81
HPS1-215ENST00000613394 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
HPS1-215ENST00000613394 TMEM89A2RUT3 159 aa10.02□□□□□ -0.81
HPS1-215ENST00000613394 CRPP02741 224 aa10.02□□□□□ -0.81
HPS1-215ENST00000613394 GAGE2AQ6NT46 116 aa10.01□□□□□ -0.81
HPS1-215ENST00000613394 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
HPS1-215ENST00000613394 TRBV30A0A0K0K1B3 111 aa10.01□□□□□ -0.81
HPS1-215ENST00000613394 EIF4EBP3O60516 100 aaPredicted RBP10.01□□□□□ -0.81
HPS1-215ENST00000613394 H7C423 109 aa10□□□□□ -0.81
HPS1-215ENST00000613394 CCL24O00175 119 aa10□□□□□ -0.81
HPS1-215ENST00000613394 BRI3O95415 125 aa10□□□□□ -0.81
HPS1-215ENST00000613394 Q9HAA7 133 aa10□□□□□ -0.81
HPS1-215ENST00000613394 IGHV4-31P0DP07 118 aa10□□□□□ -0.81
HPS1-215ENST00000613394 NBEAL2Q6ZNJ1 2754 aa10□□□□□ -0.81
HPS1-215ENST00000613394 COPS9Q8WXC6 57 aa10□□□□□ -0.81
HPS1-215ENST00000613394 ITPR3Q14573 2671 aa10□□□□□ -0.81
HPS1-215ENST00000613394 LINC00308Q8TCZ7 52 aa9.99□□□□□ -0.81
HPS1-215ENST00000613394 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
HPS1-215ENST00000613394 K7EQD1 137 aa9.99□□□□□ -0.81
HPS1-215ENST00000613394 BAALC-AS2P0C853 105 aa9.99□□□□□ -0.81
HPS1-215ENST00000613394 DNAJC30Q96LL9 226 aa9.98□□□□□ -0.81
HPS1-215ENST00000613394 MXRA5Q9NR99 2828 aa9.97□□□□□ -0.81
HPS1-215ENST00000613394 PLA2G2AP14555 144 aa9.97□□□□□ -0.81
HPS1-215ENST00000613394 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
HPS1-215ENST00000613394 HIST2H2BCQ6DN03 193 aa9.97□□□□□ -0.81
HPS1-215ENST00000613394 GCN1Q92616 2671 aaKnown RBP9.97□□□□□ -0.81
HPS1-215ENST00000613394 CITED2Q99967 270 aaPredicted RBP9.97□□□□□ -0.81
HPS1-215ENST00000613394 NDUFV3P56181 108 aaKnown RBP9.97□□□□□ -0.81
HPS1-215ENST00000613394 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
HPS1-215ENST00000613394 ODF3L2Q3SX64 289 aa9.96□□□□□ -0.81
HPS1-215ENST00000613394 MIR7-3HGQ8N6C7 128 aa9.96□□□□□ -0.81
HPS1-215ENST00000613394 HTN3P15516 51 aa9.96□□□□□ -0.82
HPS1-215ENST00000613394 C4orf3Q8WVX3 66 aa9.96□□□□□ -0.82
HPS1-215ENST00000613394 HECTD1Q9ULT8 2610 aa9.96□□□□□ -0.82
HPS1-215ENST00000613394 H3BT86 120 aa9.95□□□□□ -0.82
HPS1-215ENST00000613394 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.95□□□□□ -0.82
HPS1-215ENST00000613394 XCL1P47992 114 aa9.95□□□□□ -0.82
HPS1-215ENST00000613394 SPANXDQ9BXN6 97 aa9.95□□□□□ -0.82
HPS1-215ENST00000613394 ESM1Q9NQ30 184 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms