RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 DCANP1Q8TF63 244 aa3.74□□□□□ -1.81
VPS13D-213ENST00000613099 IGHV4OR15-8A0A075B7B6 117 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 A0A087WW49 117 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 TMEM178BH3BS89 294 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 APOC4P55056 127 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 PIP4P2Q8N4L2 257 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 B3GALT5-AS1P59052 145 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 RNASE13Q5GAN3 156 aaKnown RBP3.73□□□□□ -1.81
VPS13D-213ENST00000613099 K7ERS5 55 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 PIEZO2Q9H5I5 2752 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 K7EIM0 57 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 PRB2P02812 416 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-213ENST00000613099 IGHV3OR16-10A0A075B7F0 116 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 VMO1Q7Z5L0 202 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 Q6ZS46 218 aa3.73□□□□□ -1.81
VPS13D-213ENST00000613099 K7EMT4 169 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 CRIP1P50238 77 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 IGKV1D-37A0A075B6S9 117 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-213ENST00000613099 IGKV2-29A2NJV5 120 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-213ENST00000613099 IGIPA6NJ69 53 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 ZNF672Q499Z4 452 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-213ENST00000613099 IGLV3-9A0A075B6K5 115 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 PRM2P04554 102 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 WT1P19544 449 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-213ENST00000613099 LINC01561Q8N1V8 128 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 Q0VFX4 171 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 C7orf69Q9H7B7 122 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 UBE2D4Q9Y2X8 147 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 ZFAND3Q9H8U3 227 aa3.72□□□□□ -1.81
VPS13D-213ENST00000613099 CYP4F30PQ9H0H9 118 aa3.71□□□□□ -1.81
VPS13D-213ENST00000613099 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 SPRR3Q9UBC9 169 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 CEMP1Q6PRD7 247 aaPredicted RBP3.71□□□□□ -1.82
VPS13D-213ENST00000613099 ITLN2Q8WWU7 325 aaPredicted RBP3.71□□□□□ -1.82
VPS13D-213ENST00000613099 COX7BP24311 80 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 NANOS2P60321 138 aaKnown RBP3.71□□□□□ -1.82
VPS13D-213ENST00000613099 RPL37AP8A6NKH3 93 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 A0A087WZ39 114 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 CTSGP08311 255 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 BRWD1-AS2P59051 145 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 NPBQ8NG41 125 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 A0A087WVE0 104 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 RITA1Q96K30 269 aa3.71□□□□□ -1.82
VPS13D-213ENST00000613099 IGHV7-4-1A0A0J9YVY3 117 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 TPSG1Q9NRR2 321 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 IGF2RP11717 2491 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 FAM19A1Q7Z5A9 133 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 COX8CQ7Z4L0 72 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 LINC00846Q9NV44 126 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 TRBV6-5A0A0K0K1A5 114 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 BSPH1Q075Z2 132 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 SLPIP03973 132 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 WFDC10AQ9H1F0 79 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 C8orf87E5RJ46 101 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 LHBP01229 141 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 DIRC1Q969H9 104 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 A0A096LNJ9 63 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 IGHV1-18A0A0C4DH31 117 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 MSMBP08118 114 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 C7orf65Q6ZTY9 151 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 LINC00474Q9P2X8 69 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 LRCOL1A6NCL2 159 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 M0QY20 66 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 Q8N3U1 123 aa3.7□□□□□ -1.82
VPS13D-213ENST00000613099 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 HOXB4P17483 251 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-213ENST00000613099 IGHV3-11P01762 117 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 LINC01547P58512 204 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-213ENST00000613099 FHL3Q13643 280 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 IGLV2-23P01705 113 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 NTM-AS1Q6ZSK4 140 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 Q8N814 137 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 LINC01356Q8N9X3 169 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 COL4A2P08572 1712 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 HIGD2AQ9BW72 106 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 IGLV4-3A0A075B6K6 122 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 Q8N7P7 452 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 IGLV4-69A0A075B6H9 119 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 PRAC2D3DTV9 90 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 Q6ZVQ6 151 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 IGHV4-28A0A0C4DH34 117 aa3.69□□□□□ -1.82
VPS13D-213ENST00000613099 DEFB105AQ8NG35 78 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 ETDCA0A1B0GVM5 59 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 IGLV1-44P01699 117 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 CCL24O00175 119 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 COX17Q14061 63 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 LCA10Q71F78 164 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 ZNRD1Q9P1U0 126 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 CDKN2A-AS1Q9UH64 79 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 IGLV11-55A0A075B6I3 123 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 SMIM11BQ8TCY0 68 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 SPAG11BQ08648 103 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 ADAMTSL4-AS1Q5T5F5 129 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 SCXQ7RTU7 201 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 DEFB112Q30KQ8 113 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 PLA2G2CQ5R387 149 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 POLR2KP53803 58 aaKnown RBP3.68□□□□□ -1.82
VPS13D-213ENST00000613099 CRIP3Q6Q6R5 217 aa3.68□□□□□ -1.82
VPS13D-213ENST00000613099 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms