RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
FAM3A-221ENST00000612856 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
FAM3A-221ENST00000612856 C11orf86A6NJI1 115 aa8.1□□□□□ -1.11
FAM3A-221ENST00000612856 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
FAM3A-221ENST00000612856 APCP25054 2843 aa8.1□□□□□ -1.11
FAM3A-221ENST00000612856 LOC107984640A0A0U1RRK4 108 aa8.1□□□□□ -1.11
FAM3A-221ENST00000612856 SDHAF1A6NFY7 115 aa8.1□□□□□ -1.11
FAM3A-221ENST00000612856 J3QQQ9 107 aa8.1□□□□□ -1.11
FAM3A-221ENST00000612856 DEFB114Q30KQ6 69 aa8.1□□□□□ -1.11
FAM3A-221ENST00000612856 KMT2BQ9UMN6 2715 aaPredicted RBP8.09□□□□□ -1.11
FAM3A-221ENST00000612856 M0R2P5 195 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 FSTL3O95633 263 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 PSMB8P28062 276 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 EBI3Q14213 229 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 MAP6D1Q9H9H5 199 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 BAALCQ8WXS3 180 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 CLEC2BQ92478 149 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 U3KQK5 164 aa8.09□□□□□ -1.11
FAM3A-221ENST00000612856 RBAKDNA6NC62 111 aa8.08□□□□□ -1.12
FAM3A-221ENST00000612856 KLK5Q9Y337 293 aaPredicted RBP8.08□□□□□ -1.12
FAM3A-221ENST00000612856 ANGP03950 147 aaKnown RBP8.08□□□□□ -1.12
FAM3A-221ENST00000612856 GAGE2AQ6NT46 116 aa8.08□□□□□ -1.12
FAM3A-221ENST00000612856 MRPS12O15235 138 aaKnown RBP8.08□□□□□ -1.12
FAM3A-221ENST00000612856 LINC00694P0DN24 101 aa8.08□□□□□ -1.12
FAM3A-221ENST00000612856 OPRPNQ99935 248 aaPredicted RBP8.07□□□□□ -1.12
FAM3A-221ENST00000612856 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
FAM3A-221ENST00000612856 TMEM86BQ8N661 226 aa8.07□□□□□ -1.12
FAM3A-221ENST00000612856 C20orf173Q96LM9 149 aa8.07□□□□□ -1.12
FAM3A-221ENST00000612856 P0DMU3 169 aa8.07□□□□□ -1.12
FAM3A-221ENST00000612856 FAM231AP0DMU4 169 aa8.07□□□□□ -1.12
FAM3A-221ENST00000612856 FAM231CP0DMU5 169 aa8.07□□□□□ -1.12
FAM3A-221ENST00000612856 Q8N6K4 173 aa8.07□□□□□ -1.12
FAM3A-221ENST00000612856 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.06□□□□□ -1.12
FAM3A-221ENST00000612856 IGKV2-29A2NJV5 120 aaPredicted RBP8.06□□□□□ -1.12
FAM3A-221ENST00000612856 IGHV3-30P01768 117 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 IGHV3-33P01772 117 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 IGHV3-30-3P0DP02 117 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 IGHV3-30-5P0DP03 117 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 STAB2Q8WWQ8 2551 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 FBN2P35556 2912 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 GYPEP15421 78 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 MRPL53Q96EL3 112 aaKnown RBP8.06□□□□□ -1.12
FAM3A-221ENST00000612856 RETNQ9HD89 108 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.06□□□□□ -1.12
FAM3A-221ENST00000612856 INS-IGF2F8WCM5 200 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 Q6ZTI0 123 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 VPS13CQ709C8 3753 aa8.06□□□□□ -1.12
FAM3A-221ENST00000612856 IGLC6P0CF74 106 aa8.05□□□□□ -1.12
FAM3A-221ENST00000612856 DAND5Q8N907 189 aa8.05□□□□□ -1.12
FAM3A-221ENST00000612856 RASL10AQ92737 203 aa8.05□□□□□ -1.12
FAM3A-221ENST00000612856 NHLRC4P0CG21 123 aaPredicted RBP8.05□□□□□ -1.12
FAM3A-221ENST00000612856 A0A0J9YX75 114 aa8.05□□□□□ -1.12
FAM3A-221ENST00000612856 VCYO14598 125 aa8.04□□□□□ -1.12
FAM3A-221ENST00000612856 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
FAM3A-221ENST00000612856 NXPH4O95158 308 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 C6orf226Q5I0X4 101 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 BRI3O95415 125 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 SPART-AS1P0CW21 52 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 XCL1P47992 114 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 FAM222AQ5U5X8 452 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 GATD1Q8NB37 220 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 K7EMT4 169 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 ZNF22P17026 224 aaPredicted RBP8.03□□□□□ -1.12
FAM3A-221ENST00000612856 PFN2P35080 140 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 LINC00158P58513 81 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 HERVK_113P63121 156 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 TMEM126AQ9H061 195 aa8.03□□□□□ -1.12
FAM3A-221ENST00000612856 HIST1H4AP62805 103 aaKnown RBP8.02□□□□□ -1.13
FAM3A-221ENST00000612856 NEXN-AS1Q8NBZ9 246 aa8.02□□□□□ -1.13
FAM3A-221ENST00000612856 C11orf21Q9P2W6 132 aa8.02□□□□□ -1.13
FAM3A-221ENST00000612856 UBE2D1P51668 147 aa8.02□□□□□ -1.13
FAM3A-221ENST00000612856 IGLV2-18A0A075B6J9 118 aa8.02□□□□□ -1.13
FAM3A-221ENST00000612856 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
FAM3A-221ENST00000612856 K7EQG2 157 aa8.02□□□□□ -1.13
FAM3A-221ENST00000612856 UBE2D3P61077 147 aa8.02□□□□□ -1.13
FAM3A-221ENST00000612856 UBE2D2P62837 147 aa8.02□□□□□ -1.13
FAM3A-221ENST00000612856 TRAV12-1A0A0B4J245 112 aa8.01□□□□□ -1.13
FAM3A-221ENST00000612856 TRBV10-2A0A0K0K1G8 114 aa8.01□□□□□ -1.13
FAM3A-221ENST00000612856 F8W735 103 aaPredicted RBP8.01□□□□□ -1.13
FAM3A-221ENST00000612856 C5orf38Q86SI9 138 aa8.01□□□□□ -1.13
FAM3A-221ENST00000612856 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
FAM3A-221ENST00000612856 PROK1P58294 105 aa8.01□□□□□ -1.13
FAM3A-221ENST00000612856 TRIAP1O43715 76 aa8□□□□□ -1.13
FAM3A-221ENST00000612856 ATP5G1P05496 136 aa8□□□□□ -1.13
FAM3A-221ENST00000612856 NRACQ8N912 160 aa8□□□□□ -1.13
FAM3A-221ENST00000612856 TIMM21Q9BVV7 248 aa8□□□□□ -1.13
FAM3A-221ENST00000612856 CEMP1Q6PRD7 247 aaPredicted RBP8□□□□□ -1.13
FAM3A-221ENST00000612856 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
FAM3A-221ENST00000612856 C5orf47Q569G3 176 aa8□□□□□ -1.13
FAM3A-221ENST00000612856 IGKV3D-7A0A0C4DH55 119 aa7.99□□□□□ -1.13
FAM3A-221ENST00000612856 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
FAM3A-221ENST00000612856 J3KT08 172 aa7.99□□□□□ -1.13
FAM3A-221ENST00000612856 M0R2N4 97 aa7.99□□□□□ -1.13
FAM3A-221ENST00000612856 DNAL4O96015 105 aa7.99□□□□□ -1.13
FAM3A-221ENST00000612856 KRTAP24-1Q3LI83 254 aa7.99□□□□□ -1.13
FAM3A-221ENST00000612856 SLC25A29Q8N8R3 303 aa7.99□□□□□ -1.13
FAM3A-221ENST00000612856 LGALS9O00182 355 aa7.99□□□□□ -1.13
FAM3A-221ENST00000612856 ICOSQ9Y6W8 199 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms