RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 C20orf197Q8N268 126 aa6.48□□□□□ -1.37
LINC00547-201ENST00000612438 SOCS3O14543 225 aa6.48□□□□□ -1.37
LINC00547-201ENST00000612438 GNRH2O43555 120 aa6.48□□□□□ -1.37
LINC00547-201ENST00000612438 RNASE3P12724 160 aaKnown RBP6.48□□□□□ -1.37
LINC00547-201ENST00000612438 TRAV12-3A0A0B4J271 114 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 IGHV1-69DA0A0B4J2H0 117 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 IGIPA6NJ69 53 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 RNASE4P34096 147 aaKnown RBP6.47□□□□□ -1.37
LINC00547-201ENST00000612438 XCL1P47992 114 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 DEFB1P60022 68 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 C5orf56Q8N8D9 126 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 XCL2Q9UBD3 114 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 A0A0J9YX75 114 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 LINC00315P59091 139 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 KIF25-AS1Q9Y6Z4 181 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 USP24Q9UPU5 2620 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 CCDC168Q8NDH2 2452 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 IGHV4OR15-8A0A075B7B6 117 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 A0A087WW49 117 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 Q96MF0 132 aa6.47□□□□□ -1.37
LINC00547-201ENST00000612438 IGHV3OR16-10A0A075B7F0 116 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 NXPH4O95158 308 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 DNAL4O96015 105 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 GHRHP01286 108 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 BAALC-AS2P0C853 105 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 C19orf54Q5BKX5 351 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 UNQ9165/PRO28630Q6UXU0 137 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 NOTCH2Q04721 2471 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 POLR2KP53803 58 aaKnown RBP6.46□□□□□ -1.38
LINC00547-201ENST00000612438 TMEM141Q96I45 108 aa6.46□□□□□ -1.38
LINC00547-201ENST00000612438 A0A0J9YXY3 114 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 F6UB75 175 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 H7BZZ5 65 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 NDUFA4O00483 81 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 ADORA2A-AS1P86434 159 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 NACAE9PAV3 2078 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 CELSR2Q9HCU4 2923 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 TIMM17BO60830 172 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 TRBV12-3P01733 135 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 VSIG2Q96IQ7 327 aa6.45□□□□□ -1.38
LINC00547-201ENST00000612438 VCYO14598 125 aa6.44□□□□□ -1.38
LINC00547-201ENST00000612438 RPL39P62891 51 aaKnown RBP6.44□□□□□ -1.38
LINC00547-201ENST00000612438 SS18Q15532 418 aa6.44□□□□□ -1.38
LINC00547-201ENST00000612438 TIMM17AQ99595 171 aa6.44□□□□□ -1.38
LINC00547-201ENST00000612438 UBE2D4Q9Y2X8 147 aa6.44□□□□□ -1.38
LINC00547-201ENST00000612438 RBM3P98179 157 aaKnown RBP6.44□□□□□ -1.38
LINC00547-201ENST00000612438 LINC00474Q9P2X8 69 aa6.44□□□□□ -1.38
LINC00547-201ENST00000612438 ZNF876PQ49A33 203 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 FAM222AQ5U5X8 452 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 Q6ZSV7 163 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 TMEM61Q8N0U2 210 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 C1orf158Q8N1D5 194 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 DEFB104AQ8WTQ1 72 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 LAMTOR3Q9UHA4 124 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 MOB4Q9Y3A3 225 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 COX7A2LO14548 114 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 PRB1P04280 392 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
LINC00547-201ENST00000612438 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 CCKP06307 115 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 LMO4P61968 165 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 LYPD5Q6UWN5 251 aa6.43□□□□□ -1.38
LINC00547-201ENST00000612438 IGHV3-64A0A075B6Q5 118 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 A0A1W2PPR1 153 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 MUC4Q99102 2169 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 ZFHX3Q15911 3703 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 TRBV27A0A0K0K1C4 114 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 KLLNB2CW77 178 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 PRR15Q8IV56 129 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 A0A087WWL8 130 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 GNLYP22749 145 aa6.42□□□□□ -1.38
LINC00547-201ENST00000612438 SNRPD3P62318 126 aaKnown RBP6.42□□□□□ -1.38
LINC00547-201ENST00000612438 IGKV3-7A0A075B6H7 116 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 TRBV6-5A0A0K0K1A5 114 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 F5H697 171 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 MIAQ16674 131 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 SONP18583 2426 aaKnown RBP6.41□□□□□ -1.38
LINC00547-201ENST00000612438 ADAMTSL4-AS1Q5T5F5 129 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 Q6ZRU5 148 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 USMG5Q96IX5 58 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 LITAFQ99732 161 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 RHPN1-AS1Q9BWJ2 59 aa6.41□□□□□ -1.38
LINC00547-201ENST00000612438 SETD2Q9BYW2 2564 aaPredicted RBP6.41□□□□□ -1.38
LINC00547-201ENST00000612438 ZANQ9Y493 2812 aa6.4□□□□□ -1.38
LINC00547-201ENST00000612438 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.38
LINC00547-201ENST00000612438 IGHV3-11P01762 117 aa6.4□□□□□ -1.38
LINC00547-201ENST00000612438 BPESC1Q9GZL8 116 aa6.4□□□□□ -1.38
LINC00547-201ENST00000612438 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
LINC00547-201ENST00000612438 DOPEY2Q9Y3R5 2298 aa6.4□□□□□ -1.39
LINC00547-201ENST00000612438 ATP5EP56381 51 aaPredicted RBP6.4□□□□□ -1.39
LINC00547-201ENST00000612438 PRRC2AP48634 2157 aaKnown RBP6.4□□□□□ -1.39
LINC00547-201ENST00000612438 CHD6Q8TD26 2715 aa6.39□□□□□ -1.39
LINC00547-201ENST00000612438 IGHV1-69P01742 117 aa6.39□□□□□ -1.39
LINC00547-201ENST00000612438 MRPL55Q7Z7F7 128 aaKnown RBP6.39□□□□□ -1.39
LINC00547-201ENST00000612438 STHQ8IWL8 128 aa6.39□□□□□ -1.39
LINC00547-201ENST00000612438 H3BUA1 57 aa6.39□□□□□ -1.39
LINC00547-201ENST00000612438 CFHR3Q02985 330 aa6.39□□□□□ -1.39
LINC00547-201ENST00000612438 OPRPNQ99935 248 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms