RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZNF561-AS1K7EIQ3 104 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 TAX1BP3O14907 124 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 GAGE7O76087 117 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 TSHBP01222 138 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 GAGE12FP0CL80 117 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 GAGE12GP0CL81 117 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 GAGE12IP0CL82 117 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 HTN3P15516 51 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 SEC11AP67812 179 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 RHOHQ15669 191 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 Q6ZTI0 123 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 ALMS1Q8TCU4 4167 aa6.2□□□□□ -1.42
SMAD4-217ENST00000611848 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-217ENST00000611848 APLNQ9ULZ1 77 aa6.2□□□□□ -1.42
SMAD4-217ENST00000611848 DNAH1Q9P2D7 4330 aa6.19□□□□□ -1.42
SMAD4-217ENST00000611848 TRGV2A0A075B6R0 118 aa6.19□□□□□ -1.42
SMAD4-217ENST00000611848 LCE6AA0A183 80 aa6.19□□□□□ -1.42
SMAD4-217ENST00000611848 F5H768 121 aa6.19□□□□□ -1.42
SMAD4-217ENST00000611848 I3L3M4 83 aa6.19□□□□□ -1.42
SMAD4-217ENST00000611848 NPSP0C0P6 89 aa6.19□□□□□ -1.42
SMAD4-217ENST00000611848 PMVKQ15126 192 aa6.19□□□□□ -1.42
SMAD4-217ENST00000611848 Q6ZVH6 145 aa6.19□□□□□ -1.42
SMAD4-217ENST00000611848 P0DMU3 169 aa6.18□□□□□ -1.42
SMAD4-217ENST00000611848 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
SMAD4-217ENST00000611848 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
SMAD4-217ENST00000611848 RPL39P62891 51 aaKnown RBP6.18□□□□□ -1.42
SMAD4-217ENST00000611848 CFAP126Q5VTH2 177 aa6.18□□□□□ -1.42
SMAD4-217ENST00000611848 C15orf53Q8NAA6 179 aa6.18□□□□□ -1.42
SMAD4-217ENST00000611848 TTTY13Q9BZ97 58 aa6.18□□□□□ -1.42
SMAD4-217ENST00000611848 CDIP1Q9H305 208 aa6.18□□□□□ -1.42
SMAD4-217ENST00000611848 CST9LQ9H4G1 147 aa6.18□□□□□ -1.42
SMAD4-217ENST00000611848 MRPL16Q9NX20 251 aaKnown RBP6.18□□□□□ -1.42
SMAD4-217ENST00000611848 IGLV4-69A0A075B6H9 119 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 TRBV25-1A0A075B6N4 114 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 E9PLD3 99 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 RHODO00212 210 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 RS1O15537 224 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 PAPPA-AS1Q5QFB9 102 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 MAPKAPK5-AS1Q8N8E1 139 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 C20orf203Q8NBC4 194 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 LINC00476Q8WZB0 136 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 A6NDN8 102 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 UBE2V1Q13404 147 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 CHAC1Q9BUX1 264 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 VPS13DQ5THJ4 4388 aa6.17□□□□□ -1.42
SMAD4-217ENST00000611848 IGHV3-73A0A0B4J1V6 119 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 TRAV4A0A0B4J268 109 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 H3BRM9 83 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 LY6G6CO95867 125 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 IGHV3-53P01767 116 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 TAL2Q16559 108 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 Q6ZSN1 163 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 DEFB104AQ8WTQ1 72 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 TM2D2Q9BX73 214 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 PYGO1Q9Y3Y4 419 aa6.16□□□□□ -1.42
SMAD4-217ENST00000611848 TRAV8-6A0A0B4J262 113 aa6.15□□□□□ -1.42
SMAD4-217ENST00000611848 MYMXA0A1B0GTQ4 84 aa6.15□□□□□ -1.42
SMAD4-217ENST00000611848 C11orf86A6NJI1 115 aa6.15□□□□□ -1.42
SMAD4-217ENST00000611848 H3BNG1 76 aa6.15□□□□□ -1.42
SMAD4-217ENST00000611848 CCL25O15444 150 aa6.15□□□□□ -1.42
SMAD4-217ENST00000611848 CIDEAO60543 219 aa6.15□□□□□ -1.42
SMAD4-217ENST00000611848 NFE4Q86UQ8 179 aa6.15□□□□□ -1.42
SMAD4-217ENST00000611848 TNFRSF18Q9Y5U5 241 aa6.15□□□□□ -1.42
SMAD4-217ENST00000611848 KMT2AQ03164 3969 aa6.15□□□□□ -1.43
SMAD4-217ENST00000611848 TRAV26-1A0A087WT03 109 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 CRYBA4P53673 196 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 OR4C5Q8NGB2 326 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 ZNRF2Q8NHG8 242 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 PRADC1Q9BSG0 188 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 PRO0255Q9UI72 69 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 IGLV4-3A0A075B6K6 122 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 TRGV4A0A0C4DH28 118 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 A0A0J9YY99 117 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 C9orf118A6NHY6 69 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 PTTG1IPP53801 180 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 HERVK_113P61574 105 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 FHL2Q14192 279 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 VAMP3Q15836 100 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 CEND1Q8N111 149 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 FAM104AQ969W3 186 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 ZNF479Q96JC4 524 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 Q9UF83 564 aa6.14□□□□□ -1.43
SMAD4-217ENST00000611848 PAX4O43316 350 aa6.13□□□□□ -1.43
SMAD4-217ENST00000611848 GCSHP23434 173 aa6.13□□□□□ -1.43
SMAD4-217ENST00000611848 FXYD2P54710 66 aa6.13□□□□□ -1.43
SMAD4-217ENST00000611848 VSIG2Q96IQ7 327 aa6.13□□□□□ -1.43
SMAD4-217ENST00000611848 AMELXQ99217 191 aa6.13□□□□□ -1.43
SMAD4-217ENST00000611848 OPRPNQ99935 248 aaPredicted RBP6.13□□□□□ -1.43
SMAD4-217ENST00000611848 CHCHD7Q9BUK0 85 aa6.13□□□□□ -1.43
SMAD4-217ENST00000611848 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
SMAD4-217ENST00000611848 TRBV7-3A0A075B6L6 115 aa6.12□□□□□ -1.43
SMAD4-217ENST00000611848 AMMECR1LQ6DCA0 310 aa6.12□□□□□ -1.43
SMAD4-217ENST00000611848 RYR2Q92736 4967 aa6.12□□□□□ -1.43
SMAD4-217ENST00000611848 RYR3Q15413 4870 aa6.12□□□□□ -1.43
SMAD4-217ENST00000611848 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
SMAD4-217ENST00000611848 K7EP13 123 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms