RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 DNAH8Q96JB1 4490 aa11.77□□□□□ -0.53
MUC1-224ENST00000611577 A0A1B0GUV1 79 aa11.76□□□□□ -0.53
MUC1-224ENST00000611577 GCSHP23434 173 aa11.76□□□□□ -0.53
MUC1-224ENST00000611577 HAMPP81172 84 aa11.76□□□□□ -0.53
MUC1-224ENST00000611577 TMEM101Q96IK0 257 aa11.76□□□□□ -0.53
MUC1-224ENST00000611577 C1orf43Q9BWL3 253 aa11.76□□□□□ -0.53
MUC1-224ENST00000611577 LOC389332A0A1B0GUA5 103 aa11.75□□□□□ -0.53
MUC1-224ENST00000611577 FAM229AH3BQW9 127 aa11.75□□□□□ -0.53
MUC1-224ENST00000611577 FGF6P10767 208 aa11.75□□□□□ -0.53
MUC1-224ENST00000611577 RAB5AP20339 215 aa11.75□□□□□ -0.53
MUC1-224ENST00000611577 RPL32P62910 135 aaKnown RBP11.75□□□□□ -0.53
MUC1-224ENST00000611577 SMAGPQ0VAQ4 97 aa11.75□□□□□ -0.53
MUC1-224ENST00000611577 MIAQ16674 131 aa11.75□□□□□ -0.53
MUC1-224ENST00000611577 TMEM18Q96B42 140 aa11.75□□□□□ -0.53
MUC1-224ENST00000611577 GNB1LQ9BYB4 327 aa11.75□□□□□ -0.53
MUC1-224ENST00000611577 IGLV4-60A0A075B6I1 120 aa11.74□□□□□ -0.53
MUC1-224ENST00000611577 MT-ND6P03923 174 aa11.74□□□□□ -0.53
MUC1-224ENST00000611577 ESDP10768 282 aa11.74□□□□□ -0.53
MUC1-224ENST00000611577 REG3AQ06141 175 aa11.74□□□□□ -0.53
MUC1-224ENST00000611577 KIAA1644Q3SXP7 199 aa11.74□□□□□ -0.53
MUC1-224ENST00000611577 DGAT2L7PQ6IED9 249 aa11.74□□□□□ -0.53
MUC1-224ENST00000611577 ENHOQ6UWT2 76 aa11.74□□□□□ -0.53
MUC1-224ENST00000611577 C20orf203Q8NBC4 194 aa11.74□□□□□ -0.53
MUC1-224ENST00000611577 TGIF2-C20orf24A0A0A6YYL0 155 aa11.73□□□□□ -0.53
MUC1-224ENST00000611577 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
MUC1-224ENST00000611577 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
MUC1-224ENST00000611577 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
MUC1-224ENST00000611577 MRPL18Q9H0U6 180 aaKnown RBP11.72□□□□□ -0.53
MUC1-224ENST00000611577 J3QL48 77 aa11.71□□□□□ -0.53
MUC1-224ENST00000611577 FABP9Q0Z7S8 132 aa11.71□□□□□ -0.53
MUC1-224ENST00000611577 PRR34Q9NV39 138 aa11.71□□□□□ -0.53
MUC1-224ENST00000611577 TRAPPC1Q9Y5R8 145 aa11.7□□□□□ -0.54
MUC1-224ENST00000611577 IGLV10-54A0A075B6I4 117 aa11.69□□□□□ -0.54
MUC1-224ENST00000611577 IGLV5-52A0A0A0MRZ9 124 aa11.69□□□□□ -0.54
MUC1-224ENST00000611577 Q8N8P6 123 aa11.69□□□□□ -0.54
MUC1-224ENST00000611577 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
MUC1-224ENST00000611577 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
MUC1-224ENST00000611577 PRSS47A8MTI9 375 aa11.68□□□□□ -0.54
MUC1-224ENST00000611577 MRPL52Q86TS9 123 aaKnown RBP11.68□□□□□ -0.54
MUC1-224ENST00000611577 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
MUC1-224ENST00000611577 NXT2Q9NPJ8 142 aaKnown RBP11.68□□□□□ -0.54
MUC1-224ENST00000611577 LECT2O14960 151 aa11.67□□□□□ -0.54
MUC1-224ENST00000611577 LRCOL1A6NCL2 159 aa11.66□□□□□ -0.54
MUC1-224ENST00000611577 CBLN2Q8IUK8 224 aa11.66□□□□□ -0.54
MUC1-224ENST00000611577 PRSS3P2Q8NHM4 247 aa11.66□□□□□ -0.54
MUC1-224ENST00000611577 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
MUC1-224ENST00000611577 HMCN2Q8NDA2 5059 aa11.66□□□□□ -0.54
MUC1-224ENST00000611577 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
MUC1-224ENST00000611577 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.54
MUC1-224ENST00000611577 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
MUC1-224ENST00000611577 K7EMI3 77 aa11.64□□□□□ -0.55
MUC1-224ENST00000611577 IFI27P40305 119 aaPredicted RBP11.64□□□□□ -0.55
MUC1-224ENST00000611577 ORMDL2Q53FV1 153 aa11.64□□□□□ -0.55
MUC1-224ENST00000611577 Q8N814 137 aa11.64□□□□□ -0.55
MUC1-224ENST00000611577 ALKBH7Q9BT30 221 aaPredicted RBP11.64□□□□□ -0.55
MUC1-224ENST00000611577 TIMM21Q9BVV7 248 aa11.64□□□□□ -0.55
MUC1-224ENST00000611577 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
MUC1-224ENST00000611577 SS18Q15532 418 aa11.63□□□□□ -0.55
MUC1-224ENST00000611577 SPANXA1Q9NS26 97 aa11.63□□□□□ -0.55
MUC1-224ENST00000611577 CSDC2Q9Y534 153 aaKnown RBP11.63□□□□□ -0.55
MUC1-224ENST00000611577 G0S2P27469 103 aa11.62□□□□□ -0.55
MUC1-224ENST00000611577 C14orf177Q52M58 125 aa11.62□□□□□ -0.55
MUC1-224ENST00000611577 RNASE13Q5GAN3 156 aaKnown RBP11.62□□□□□ -0.55
MUC1-224ENST00000611577 CYSLTR1Q9Y271 337 aa11.62□□□□□ -0.55
MUC1-224ENST00000611577 GAGE12HA6NDE8 117 aa11.61□□□□□ -0.55
MUC1-224ENST00000611577 WFDC2Q14508 124 aa11.61□□□□□ -0.55
MUC1-224ENST00000611577 Q6ZUT4 128 aa11.61□□□□□ -0.55
MUC1-224ENST00000611577 FA2HQ7L5A8 372 aa11.61□□□□□ -0.55
MUC1-224ENST00000611577 CHCHD10Q8WYQ3 142 aaPredicted RBP11.61□□□□□ -0.55
MUC1-224ENST00000611577 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.6□□□□□ -0.55
MUC1-224ENST00000611577 LINC00959A0A1B0GUT2 108 aa11.6□□□□□ -0.55
MUC1-224ENST00000611577 USP17L23D6RBM5 183 aa11.6□□□□□ -0.55
MUC1-224ENST00000611577 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
MUC1-224ENST00000611577 YPEL4Q96NS1 127 aa11.6□□□□□ -0.55
MUC1-224ENST00000611577 FAM30AQ9NZY2 134 aa11.6□□□□□ -0.55
MUC1-224ENST00000611577 XCL1P47992 114 aa11.59□□□□□ -0.55
MUC1-224ENST00000611577 UBR4Q5T4S7 5183 aa11.58□□□□□ -0.55
MUC1-224ENST00000611577 TRAV13-1A0A0B4J241 112 aa11.58□□□□□ -0.56
MUC1-224ENST00000611577 CCL25O15444 150 aa11.58□□□□□ -0.56
MUC1-224ENST00000611577 PLA2G1BP04054 148 aaKnown RBP11.58□□□□□ -0.56
MUC1-224ENST00000611577 KRTAP26-1Q6PEX3 210 aa11.58□□□□□ -0.56
MUC1-224ENST00000611577 Q6ZN92 141 aa11.57□□□□□ -0.56
MUC1-224ENST00000611577 LRP1Q07954 4544 aaKnown RBP11.56□□□□□ -0.56
MUC1-224ENST00000611577 C1orf196B1AJZ1 125 aa11.56□□□□□ -0.56
MUC1-224ENST00000611577 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
MUC1-224ENST00000611577 CFAP161Q6P656 301 aa11.56□□□□□ -0.56
MUC1-224ENST00000611577 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
MUC1-224ENST00000611577 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
MUC1-224ENST00000611577 PYGO1Q9Y3Y4 419 aa11.56□□□□□ -0.56
MUC1-224ENST00000611577 IFITM10A6NMD0 228 aa11.55□□□□□ -0.56
MUC1-224ENST00000611577 KRTAP29-1A8MX34 341 aaPredicted RBP11.55□□□□□ -0.56
MUC1-224ENST00000611577 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
MUC1-224ENST00000611577 C18orf32Q8TCD1 76 aa11.55□□□□□ -0.56
MUC1-224ENST00000611577 RAB5BP61020 215 aa11.54□□□□□ -0.56
MUC1-224ENST00000611577 TEX43Q6ZNM6 134 aa11.54□□□□□ -0.56
MUC1-224ENST00000611577 AP5S1Q9NUS5 200 aa11.54□□□□□ -0.56
MUC1-224ENST00000611577 FAT3Q8TDW7 4589 aa11.54□□□□□ -0.56
MUC1-224ENST00000611577 hDV102S1A0JD36 115 aa11.53□□□□□ -0.56
MUC1-224ENST00000611577 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
MUC1-224ENST00000611577 CD164L2Q6UWJ8 174 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms