RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 ARRDC1-AS1Q9H2J1 176 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 NBEAQ8NFP9 2946 aa3.41□□□□□ -1.86
HDDC2-208ENST00000609021 IGHV6-1A0A0B4J1U7 121 aa3.4□□□□□ -1.86
HDDC2-208ENST00000609021 IGIPA6NJ69 53 aa3.4□□□□□ -1.86
HDDC2-208ENST00000609021 H0YGG7 62 aa3.4□□□□□ -1.86
HDDC2-208ENST00000609021 BPY2O14599 106 aa3.4□□□□□ -1.86
HDDC2-208ENST00000609021 LY6HO94772 140 aa3.4□□□□□ -1.86
HDDC2-208ENST00000609021 FSTL3O95633 263 aa3.4□□□□□ -1.86
HDDC2-208ENST00000609021 BBC3Q96PG8 261 aaPredicted RBP3.4□□□□□ -1.86
HDDC2-208ENST00000609021 ZFHX2Q9C0A1 2572 aaPredicted RBP3.4□□□□□ -1.86
HDDC2-208ENST00000609021 IGHV3-30-3P0DP02 117 aa3.4□□□□□ -1.87
HDDC2-208ENST00000609021 IGLV3-21P80748 117 aaPredicted RBP3.4□□□□□ -1.87
HDDC2-208ENST00000609021 LEAP2Q969E1 77 aa3.4□□□□□ -1.87
HDDC2-208ENST00000609021 CACNA1AO00555 2505 aa3.4□□□□□ -1.87
HDDC2-208ENST00000609021 BRWD1Q9NSI6 2320 aa3.4□□□□□ -1.87
HDDC2-208ENST00000609021 IGLV4-69A0A075B6H9 119 aa3.4□□□□□ -1.87
HDDC2-208ENST00000609021 IGLV2-11P01706 119 aa3.4□□□□□ -1.87
HDDC2-208ENST00000609021 RPS21P63220 83 aaKnown RBP3.4□□□□□ -1.87
HDDC2-208ENST00000609021 C17orf82Q86X59 251 aaPredicted RBP3.4□□□□□ -1.87
HDDC2-208ENST00000609021 DEFB123Q8N688 67 aa3.4□□□□□ -1.87
HDDC2-208ENST00000609021 MIR7-3HGQ8N6C7 128 aa3.4□□□□□ -1.87
HDDC2-208ENST00000609021 DOPEY2Q9Y3R5 2298 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 C19orf84I3L1E1 186 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 DAZAP2Q15038 168 aaPredicted RBP3.39□□□□□ -1.87
HDDC2-208ENST00000609021 FAM27BQ5VT28 67 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 Q6ZTC4 211 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 PRSS33Q8NF86 280 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 BOD1L1Q8NFC6 3051 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 TRBV7-4A0A0J9YYF1 115 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 LECT2O14960 151 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 ZNF32P17041 273 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 FOLR3P41439 243 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 BRWD1-AS2P59051 145 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 LINC00528Q8N1L1 170 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 ZNF843Q8N446 348 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 CDC42SE1Q9NRR8 79 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 PTPRQQ9UMZ3 2332 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 NBASA2RRP1 2371 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 LY6G6EA0A0G2JKS1 128 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 LHBP01229 141 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 RPL36AP83881 106 aaKnown RBP3.39□□□□□ -1.87
HDDC2-208ENST00000609021 RPL36ALQ969Q0 106 aaKnown RBP3.39□□□□□ -1.87
HDDC2-208ENST00000609021 U3KQA8 63 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 X6R8D5 127 aa3.39□□□□□ -1.87
HDDC2-208ENST00000609021 ABCA4P78363 2273 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 A8MU10 97 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 PDE6HQ13956 83 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 Q5VV11 94 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 AMELXQ99217 191 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 KIF25-AS1Q9Y6Z4 181 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 TRBV10-1A0A0K0K1A3 114 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 KLLNB2CW77 178 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 GNRH2O43555 120 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 RPL39P5Q59GN2 51 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 AKAP13Q12802 2813 aa3.38□□□□□ -1.87
HDDC2-208ENST00000609021 C3orf84H3BNL1 204 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 PSCAO43653 123 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 CLPSP04118 112 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 PATE4P0C8F1 98 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 CCL4P13236 92 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 LINC01547P58512 204 aaPredicted RBP3.37□□□□□ -1.87
HDDC2-208ENST00000609021 PRR4Q16378 134 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 CNFNQ9BYD5 112 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 SMAD5-AS1Q9Y6J3 95 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 ZNF462Q96JM2 2506 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 TECTAO75443 2155 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 MALRD1Q5VYJ5 2156 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 IGHV3-9P01782 118 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 DSCAMO60469 2012 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 IGKV2-40A0A087WW87 121 aaPredicted RBP3.37□□□□□ -1.87
HDDC2-208ENST00000609021 IGHV3OR16-9A0A0B4J2B5 98 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 IGKV2D-40P01614 121 aaPredicted RBP3.37□□□□□ -1.87
HDDC2-208ENST00000609021 SPINK2P20155 84 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 ZNF833PQ6ZTB9 187 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 Q8TAT8 98 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 LINC00308Q8TCZ7 52 aa3.37□□□□□ -1.87
HDDC2-208ENST00000609021 RPL39P62891 51 aaKnown RBP3.36□□□□□ -1.87
HDDC2-208ENST00000609021 DEFB104AQ8WTQ1 72 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 DCHS2Q6V1P9 2916 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 NCOR2Q9Y618 2525 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 K7EQG2 157 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 NDUFB1O75438 58 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 RPL39LQ96EH5 51 aaKnown RBP3.36□□□□□ -1.87
HDDC2-208ENST00000609021 MAP6D1Q9H9H5 199 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 F5P12259 2224 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 ZZEF1O43149 2961 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 ACACBO00763 2458 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 IGHV3-21A0A0B4J1V1 117 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 KIAA0087Q14695 138 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 MED13LQ71F56 2210 aa3.36□□□□□ -1.87
HDDC2-208ENST00000609021 FLNBO75369 2602 aaKnown RBP3.36□□□□□ -1.87
HDDC2-208ENST00000609021 B3GALT5-AS1P59052 145 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 FAM74A4Q5TZK3 123 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 FAM218AQ96MZ4 157 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 CREBBPQ92793 2442 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 GPR179Q6PRD1 2367 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms