RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 VPS13AQ96RL7 3174 aa4.6□□□□□ -1.67
HDDC2-205ENST00000608456 CFAP54Q96N23 3096 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.59□□□□□ -1.67
HDDC2-205ENST00000608456 IGHV4-61A0A0C4DH41 118 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 IGKV2-29A2NJV5 120 aaPredicted RBP4.59□□□□□ -1.67
HDDC2-205ENST00000608456 LINC00694P0DN24 101 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 IGHV4-38-2P0DP08 117 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 HOXD3P31249 432 aaPredicted RBP4.59□□□□□ -1.67
HDDC2-205ENST00000608456 LYPD5Q6UWN5 251 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 SOSTDC1Q6X4U4 206 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 Q8N2B8 174 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 LINC00482Q8N8I6 264 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 IL17DQ8TAD2 202 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 SMCR5Q8TEV8 140 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 LINC00167Q96N53 147 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 PLA2G2DQ9UNK4 145 aa4.59□□□□□ -1.67
HDDC2-205ENST00000608456 PRRC2CQ9Y520 2896 aaKnown RBP4.59□□□□□ -1.67
HDDC2-205ENST00000608456 DSPP15924 2871 aaKnown RBP4.58□□□□□ -1.68
HDDC2-205ENST00000608456 hADV29S1A0JD25 119 aa4.58□□□□□ -1.68
HDDC2-205ENST00000608456 NDUFC2O95298 119 aa4.58□□□□□ -1.68
HDDC2-205ENST00000608456 SYNJ2BPP57105 145 aa4.58□□□□□ -1.68
HDDC2-205ENST00000608456 DEFB131AP59861 70 aa4.58□□□□□ -1.68
HDDC2-205ENST00000608456 COX6A2Q02221 97 aa4.58□□□□□ -1.68
HDDC2-205ENST00000608456 RBMY1FQ15415 496 aaKnown RBP4.58□□□□□ -1.68
HDDC2-205ENST00000608456 CEMP1Q6PRD7 247 aaPredicted RBP4.58□□□□□ -1.68
HDDC2-205ENST00000608456 Q6ZSN1 163 aa4.58□□□□□ -1.68
HDDC2-205ENST00000608456 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.58□□□□□ -1.68
HDDC2-205ENST00000608456 TMEM243Q9BU79 118 aa4.58□□□□□ -1.68
HDDC2-205ENST00000608456 MYO15AQ9UKN7 3530 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 TRBV6-4A0A1B0GX49 114 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 A8MZ25 164 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 K7EQD1 137 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 TMEM256-PLSCR3K7ERE1 68 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 LY6G6DO95868 133 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 IGKV3-20P01619 116 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 CCKP06307 115 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 PDE6GP18545 87 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 PROK1P58294 105 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 Q6ZSV7 163 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 LINC01356Q8N9X3 169 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 COX7B2Q8TF08 81 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 SND1-IT1Q9HBX3 110 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 DOPEY2Q9Y3R5 2298 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 PRUNE2Q8WUY3 3088 aa4.57□□□□□ -1.68
HDDC2-205ENST00000608456 TNRC18O15417 2968 aaPredicted RBP4.56□□□□□ -1.68
HDDC2-205ENST00000608456 SPTBN2O15020 2390 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 SPTBN1Q01082 2364 aaKnown RBP4.56□□□□□ -1.68
HDDC2-205ENST00000608456 COL6A6A6NMZ7 2263 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 MED13LQ71F56 2210 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 A0A087WZ39 114 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 UBE2L6O14933 153 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 NPC2P61916 151 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 Q6YL49 198 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 DEFB104AQ8WTQ1 72 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 ORMDL1Q9P0S3 153 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 PTPRZ1P23471 2315 aaPredicted RBP4.56□□□□□ -1.68
HDDC2-205ENST00000608456 PTPRQQ9UMZ3 2332 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 BDP1A6H8Y1 2624 aa4.56□□□□□ -1.68
HDDC2-205ENST00000608456 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 IGHV3OR16-9A0A0B4J2B5 98 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 LOC107984640A0A0U1RRK4 108 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 SMIM9A6NGZ8 99 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 KNCNA6PVL3 124 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 FSHBP01225 129 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 IGHV4-59P01825 116 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 ATP5J2P56134 94 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 COX17Q14061 63 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 DEFB114Q30KQ6 69 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 RNASE13Q5GAN3 156 aaKnown RBP4.55□□□□□ -1.68
HDDC2-205ENST00000608456 TMEM86BQ8N661 226 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 SMIM11BQ8TCY0 68 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 C4orf3Q8WVX3 66 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 DPH3Q96FX2 82 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 FAM218AQ96MZ4 157 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 CCL19Q99731 98 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 UPK3BQ9BT76 320 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 MAP6D1Q9H9H5 199 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 NACAE9PAV3 2078 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 FREM2Q5SZK8 3169 aa4.55□□□□□ -1.68
HDDC2-205ENST00000608456 TLN1Q9Y490 2541 aaKnown RBP4.54□□□□□ -1.68
HDDC2-205ENST00000608456 IGKV2-28A0A075B6P5 120 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 USP17L23D6RBM5 183 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 IGKV2D-28P01615 120 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 EDN2P20800 178 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 DEFB112Q30KQ8 113 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 NTM-AS1Q6ZSK4 140 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 FAM19A5Q7Z5A7 132 aaPredicted RBP4.54□□□□□ -1.68
HDDC2-205ENST00000608456 MIR7-3HGQ8N6C7 128 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 LINC00337Q8N6G1 96 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 ZNF702PQ9H963 129 aa4.54□□□□□ -1.68
HDDC2-205ENST00000608456 A0A1B0GUV1 79 aa4.53□□□□□ -1.68
HDDC2-205ENST00000608456 CCL18P55774 89 aa4.53□□□□□ -1.68
HDDC2-205ENST00000608456 Q8IZM0 81 aa4.53□□□□□ -1.68
HDDC2-205ENST00000608456 DYNLRB2Q8TF09 96 aa4.53□□□□□ -1.68
HDDC2-205ENST00000608456 C16orf74Q96GX8 76 aa4.53□□□□□ -1.68
HDDC2-205ENST00000608456 Q96MF0 132 aa4.53□□□□□ -1.68
HDDC2-205ENST00000608456 LINC00846Q9NV44 126 aa4.53□□□□□ -1.68
HDDC2-205ENST00000608456 ANKRD11Q6UB99 2663 aaPredicted RBP4.53□□□□□ -1.68
HDDC2-205ENST00000608456 ZZEF1O43149 2961 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms