RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 RPL39P62891 51 aaKnown RBP7.55□□□□□ -1.2
LINC01001-203ENST00000607448 C20orf203Q8NBC4 194 aa7.55□□□□□ -1.2
LINC01001-203ENST00000607448 EPPK1P58107 5090 aaKnown RBP7.55□□□□□ -1.2
LINC01001-203ENST00000607448 A8MWV9 139 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 CMC4P56277 68 aaPredicted RBP7.54□□□□□ -1.2
LINC01001-203ENST00000607448 ZNF415Q09FC8 603 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 LYRM7Q5U5X0 104 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 H3BMM0 161 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 LEPROTO15243 131 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
LINC01001-203ENST00000607448 STHQ8IWL8 128 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 CLUHP3Q96NS8 147 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 PYGO1Q9Y3Y4 419 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 KMT2AQ03164 3969 aa7.54□□□□□ -1.2
LINC01001-203ENST00000607448 A0A0J9YY99 117 aa7.53□□□□□ -1.2
LINC01001-203ENST00000607448 M0R2P5 195 aa7.53□□□□□ -1.2
LINC01001-203ENST00000607448 DEFB4AO15263 64 aa7.53□□□□□ -1.2
LINC01001-203ENST00000607448 UBE2D1P51668 147 aa7.53□□□□□ -1.2
LINC01001-203ENST00000607448 TMEM170BQ5T4T1 132 aa7.53□□□□□ -1.2
LINC01001-203ENST00000607448 PLEKHB2Q96CS7 222 aa7.53□□□□□ -1.2
LINC01001-203ENST00000607448 RHODO00212 210 aa7.52□□□□□ -1.21
LINC01001-203ENST00000607448 P0DMU3 169 aa7.52□□□□□ -1.21
LINC01001-203ENST00000607448 FAM231AP0DMU4 169 aa7.52□□□□□ -1.21
LINC01001-203ENST00000607448 FAM231CP0DMU5 169 aa7.52□□□□□ -1.21
LINC01001-203ENST00000607448 LGALS3P17931 250 aaKnown RBP7.52□□□□□ -1.21
LINC01001-203ENST00000607448 SPXQ9BT56 116 aa7.52□□□□□ -1.21
LINC01001-203ENST00000607448 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
LINC01001-203ENST00000607448 J3QQQ9 107 aa7.51□□□□□ -1.21
LINC01001-203ENST00000607448 J3QR89 54 aa7.51□□□□□ -1.21
LINC01001-203ENST00000607448 SLC25A29Q8N8R3 303 aa7.51□□□□□ -1.21
LINC01001-203ENST00000607448 ZNRF2Q8NHG8 242 aa7.51□□□□□ -1.21
LINC01001-203ENST00000607448 DNAJC30Q96LL9 226 aa7.51□□□□□ -1.21
LINC01001-203ENST00000607448 VCX2Q9H322 139 aa7.51□□□□□ -1.21
LINC01001-203ENST00000607448 IGLV4-3A0A075B6K6 122 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 RBMY1A1P0DJD3 496 aaKnown RBP7.5□□□□□ -1.21
LINC01001-203ENST00000607448 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 RBMY1FQ15415 496 aaKnown RBP7.5□□□□□ -1.21
LINC01001-203ENST00000607448 CSNK1G2-AS1Q8NCQ2 148 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 TNFRSF18Q9Y5U5 241 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 FRAS1Q86XX4 4008 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 EMP1P54849 157 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 NANOS2P60321 138 aaKnown RBP7.5□□□□□ -1.21
LINC01001-203ENST00000607448 COTL1Q14019 142 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 Q8NAQ8 132 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
LINC01001-203ENST00000607448 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 X6R8D5 127 aa7.5□□□□□ -1.21
LINC01001-203ENST00000607448 INSP01308 110 aa7.49□□□□□ -1.21
LINC01001-203ENST00000607448 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
LINC01001-203ENST00000607448 IGHV3-30-5P0DP03 117 aa7.49□□□□□ -1.21
LINC01001-203ENST00000607448 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
LINC01001-203ENST00000607448 RPL24P83731 157 aaKnown RBP7.49□□□□□ -1.21
LINC01001-203ENST00000607448 GAGE13Q4V321 117 aa7.49□□□□□ -1.21
LINC01001-203ENST00000607448 AMELXQ99217 191 aa7.49□□□□□ -1.21
LINC01001-203ENST00000607448 C11orf68Q9H3H3 251 aaKnown RBP7.49□□□□□ -1.21
LINC01001-203ENST00000607448 SPANXA1Q9NS26 97 aa7.49□□□□□ -1.21
LINC01001-203ENST00000607448 IGHV4-28A0A0C4DH34 117 aa7.48□□□□□ -1.21
LINC01001-203ENST00000607448 TSPEAR-AS2P59090 65 aa7.48□□□□□ -1.21
LINC01001-203ENST00000607448 CEMP1Q6PRD7 247 aaPredicted RBP7.48□□□□□ -1.21
LINC01001-203ENST00000607448 XCL2Q9UBD3 114 aa7.48□□□□□ -1.21
LINC01001-203ENST00000607448 TEX48A0A1B0GUV7 120 aa7.47□□□□□ -1.21
LINC01001-203ENST00000607448 NUPR2A6NF83 97 aa7.47□□□□□ -1.21
LINC01001-203ENST00000607448 H3BMG7 143 aa7.47□□□□□ -1.21
LINC01001-203ENST00000607448 RS1O15537 224 aa7.47□□□□□ -1.21
LINC01001-203ENST00000607448 TSPAN13O95857 204 aa7.47□□□□□ -1.21
LINC01001-203ENST00000607448 MRPS36P82909 103 aaKnown RBP7.47□□□□□ -1.21
LINC01001-203ENST00000607448 LINC01587Q99440 93 aa7.47□□□□□ -1.21
LINC01001-203ENST00000607448 PRO0461Q9UI25 63 aa7.47□□□□□ -1.21
LINC01001-203ENST00000607448 TRBV20-1A0A075B6N2 111 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 TMEM238C9JI98 176 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 IGHV3-53P01767 116 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 UBE2D3P61077 147 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 UBE2D2P62837 147 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 WFDC2Q14508 124 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 C21orf62-AS1Q17RA5 79 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 CFAP126Q5VTH2 177 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 C11orf72Q8NBR9 251 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 ATP6V0E2Q8NHE4 81 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 C11orf45Q8TAV5 145 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 DEFB104AQ8WTQ1 72 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 LINC00476Q8WZB0 136 aa7.46□□□□□ -1.21
LINC01001-203ENST00000607448 OPRPNQ99935 248 aaPredicted RBP7.46□□□□□ -1.21
LINC01001-203ENST00000607448 A0A0J9YXV3 536 aa7.46□□□□□ -1.22
LINC01001-203ENST00000607448 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
LINC01001-203ENST00000607448 HTN1P15515 57 aa7.46□□□□□ -1.22
LINC01001-203ENST00000607448 C10orf126Q8N4M7 172 aa7.46□□□□□ -1.22
LINC01001-203ENST00000607448 CELA1Q9UNI1 258 aa7.46□□□□□ -1.22
LINC01001-203ENST00000607448 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.45□□□□□ -1.22
LINC01001-203ENST00000607448 A0A0B4J2C4 111 aa7.45□□□□□ -1.22
LINC01001-203ENST00000607448 APOMO95445 188 aa7.45□□□□□ -1.22
LINC01001-203ENST00000607448 MIFP14174 115 aa7.45□□□□□ -1.22
LINC01001-203ENST00000607448 CHCHD7Q9BUK0 85 aa7.45□□□□□ -1.22
LINC01001-203ENST00000607448 TIMM21Q9BVV7 248 aa7.45□□□□□ -1.22
LINC01001-203ENST00000607448 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
LINC01001-203ENST00000607448 VPS13DQ5THJ4 4388 aa7.44□□□□□ -1.22
LINC01001-203ENST00000607448 IGHV3-73A0A0B4J1V6 119 aa7.44□□□□□ -1.22
LINC01001-203ENST00000607448 LY6G6CO95867 125 aa7.44□□□□□ -1.22
LINC01001-203ENST00000607448 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
LINC01001-203ENST00000607448 CFC1P0CG37 223 aa7.44□□□□□ -1.22
LINC01001-203ENST00000607448 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms