RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CSDC2Q9Y534 153 aaKnown RBP15.06■□□□□ 0
USP6NL-204ENST00000606752 IGLV4-69A0A075B6H9 119 aa15.06■□□□□ 0
USP6NL-204ENST00000606752 H7C423 109 aa15.06■□□□□ 0
USP6NL-204ENST00000606752 FGF6P10767 208 aa15.06■□□□□ 0
USP6NL-204ENST00000606752 UBE2L6O14933 153 aa15.05■□□□□ -0
USP6NL-204ENST00000606752 Q6ZUT4 128 aa15.03■□□□□ -0
USP6NL-204ENST00000606752 C11orf86A6NJI1 115 aa15.02■□□□□ -0
USP6NL-204ENST00000606752 MRPL23Q16540 153 aaKnown RBP15.02■□□□□ -0
USP6NL-204ENST00000606752 A0A096LPF7 62 aa15.01□□□□□ -0.01
USP6NL-204ENST00000606752 TCTAP57738 103 aa15.01□□□□□ -0.01
USP6NL-204ENST00000606752 RNASE13Q5GAN3 156 aaKnown RBP15.01□□□□□ -0.01
USP6NL-204ENST00000606752 AMMECR1LQ6DCA0 310 aa15.01□□□□□ -0.01
USP6NL-204ENST00000606752 Q6ZTC4 211 aa15.01□□□□□ -0.01
USP6NL-204ENST00000606752 NFE4Q86UQ8 179 aa15.01□□□□□ -0.01
USP6NL-204ENST00000606752 C11orf45Q8TAV5 145 aa15.01□□□□□ -0.01
USP6NL-204ENST00000606752 COX8AP10176 69 aa15.01□□□□□ -0.01
USP6NL-204ENST00000606752 SLC25A34Q6PIV7 304 aa15□□□□□ -0.01
USP6NL-204ENST00000606752 SH2D6Q7Z4S9 175 aa15□□□□□ -0.01
USP6NL-204ENST00000606752 OR5A1Q8NGJ0 315 aa15□□□□□ -0.01
USP6NL-204ENST00000606752 C2orf88Q9BSF0 95 aa15□□□□□ -0.01
USP6NL-204ENST00000606752 CHCHD5Q9BSY4 110 aa15□□□□□ -0.01
USP6NL-204ENST00000606752 ICOSQ9Y6W8 199 aa15□□□□□ -0.01
USP6NL-204ENST00000606752 TMEM101Q96IK0 257 aa14.99□□□□□ -0.01
USP6NL-204ENST00000606752 TENM3Q9P273 2699 aa14.99□□□□□ -0.01
USP6NL-204ENST00000606752 ZNF25P17030 456 aaPredicted RBP14.99□□□□□ -0.01
USP6NL-204ENST00000606752 NMUP48645 174 aa14.99□□□□□ -0.01
USP6NL-204ENST00000606752 GAGE6Q13070 117 aa14.99□□□□□ -0.01
USP6NL-204ENST00000606752 CDC42SE2Q9NRR3 84 aa14.99□□□□□ -0.01
USP6NL-204ENST00000606752 A0A0J9YXV3 536 aa14.98□□□□□ -0.01
USP6NL-204ENST00000606752 H3BNG1 76 aa14.98□□□□□ -0.01
USP6NL-204ENST00000606752 NANOS2P60321 138 aaKnown RBP14.98□□□□□ -0.01
USP6NL-204ENST00000606752 CHAC1Q9BUX1 264 aa14.98□□□□□ -0.01
USP6NL-204ENST00000606752 IGKV2D-26A0A0A0MRZ7 120 aa14.97□□□□□ -0.01
USP6NL-204ENST00000606752 DEFA6Q01524 100 aa14.97□□□□□ -0.01
USP6NL-204ENST00000606752 KRTAP21-3Q3LHN1 58 aa14.96□□□□□ -0.01
USP6NL-204ENST00000606752 HNRNPA3P51991 378 aaKnown RBP14.96□□□□□ -0.01
USP6NL-204ENST00000606752 TMEM170BQ5T4T1 132 aa14.96□□□□□ -0.01
USP6NL-204ENST00000606752 UBE2D1P51668 147 aa14.95□□□□□ -0.02
USP6NL-204ENST00000606752 BOD1L2Q8IYS8 172 aa14.95□□□□□ -0.02
USP6NL-204ENST00000606752 PCP2Q8IVA1 136 aa14.94□□□□□ -0.02
USP6NL-204ENST00000606752 TINCRA0A1B0GVN0 87 aa14.94□□□□□ -0.02
USP6NL-204ENST00000606752 E9PLD3 99 aa14.94□□□□□ -0.02
USP6NL-204ENST00000606752 DLEU1O43261 78 aa14.94□□□□□ -0.02
USP6NL-204ENST00000606752 TP73-AS1Q9UF72 201 aa14.94□□□□□ -0.02
USP6NL-204ENST00000606752 DEFB131BA0A096LNP1 70 aa14.93□□□□□ -0.02
USP6NL-204ENST00000606752 HERVK_113P61574 105 aa14.93□□□□□ -0.02
USP6NL-204ENST00000606752 ZNF22P17026 224 aaPredicted RBP14.92□□□□□ -0.02
USP6NL-204ENST00000606752 MRPS16Q9Y3D3 137 aaKnown RBP14.92□□□□□ -0.02
USP6NL-204ENST00000606752 CTAG1AP78358 180 aa14.92□□□□□ -0.02
USP6NL-204ENST00000606752 B9D2Q9BPU9 175 aa14.92□□□□□ -0.02
USP6NL-204ENST00000606752 IGLV4-60A0A075B6I1 120 aa14.91□□□□□ -0.02
USP6NL-204ENST00000606752 A0A1B0GUV1 79 aa14.91□□□□□ -0.02
USP6NL-204ENST00000606752 TMEM262E9PQX1 116 aa14.91□□□□□ -0.02
USP6NL-204ENST00000606752 HUWE1Q7Z6Z7 4374 aaKnown RBP14.9□□□□□ -0.02
USP6NL-204ENST00000606752 TRAV8-6A0A0B4J262 113 aa14.89□□□□□ -0.03
USP6NL-204ENST00000606752 TMEM223A0PJW6 202 aa14.89□□□□□ -0.03
USP6NL-204ENST00000606752 TIRAPP58753 221 aa14.89□□□□□ -0.03
USP6NL-204ENST00000606752 LELP1Q5T871 98 aa14.89□□□□□ -0.03
USP6NL-204ENST00000606752 FAM19A3Q7Z5A8 133 aa14.89□□□□□ -0.03
USP6NL-204ENST00000606752 GEMIN7Q9H840 131 aaKnown RBP14.89□□□□□ -0.03
USP6NL-204ENST00000606752 TRAV13-1A0A0B4J241 112 aa14.89□□□□□ -0.03
USP6NL-204ENST00000606752 SEC11AP67812 179 aa14.89□□□□□ -0.03
USP6NL-204ENST00000606752 TTTY13Q9BZ97 58 aa14.89□□□□□ -0.03
USP6NL-204ENST00000606752 RBX1P62877 108 aa14.88□□□□□ -0.03
USP6NL-204ENST00000606752 LINC00242Q5T6M2 205 aa14.87□□□□□ -0.03
USP6NL-204ENST00000606752 LYPD5Q6UWN5 251 aa14.87□□□□□ -0.03
USP6NL-204ENST00000606752 TRAV10A0A0B4J240 114 aa14.87□□□□□ -0.03
USP6NL-204ENST00000606752 SIVA1O15304 175 aa14.87□□□□□ -0.03
USP6NL-204ENST00000606752 MPV17L2Q567V2 206 aa14.87□□□□□ -0.03
USP6NL-204ENST00000606752 HERVK_113P63121 156 aa14.86□□□□□ -0.03
USP6NL-204ENST00000606752 C2orf91Q6ZV80 131 aa14.86□□□□□ -0.03
USP6NL-204ENST00000606752 LINC00469Q8N7U9 141 aa14.86□□□□□ -0.03
USP6NL-204ENST00000606752 MAPKAPK5-AS1Q8N8E1 139 aa14.86□□□□□ -0.03
USP6NL-204ENST00000606752 IGLV5-45A0A087WSX0 123 aa14.85□□□□□ -0.03
USP6NL-204ENST00000606752 DNHD1Q96M86 4753 aa14.85□□□□□ -0.03
USP6NL-204ENST00000606752 COX6A2Q02221 97 aa14.85□□□□□ -0.03
USP6NL-204ENST00000606752 M0R143 59 aa14.83□□□□□ -0.04
USP6NL-204ENST00000606752 CDKN2A-AS1Q9UH64 79 aa14.83□□□□□ -0.04
USP6NL-204ENST00000606752 MYMXA0A1B0GTQ4 84 aa14.82□□□□□ -0.04
USP6NL-204ENST00000606752 LEPROTO15243 131 aa14.82□□□□□ -0.04
USP6NL-204ENST00000606752 H3BRM9 83 aa14.82□□□□□ -0.04
USP6NL-204ENST00000606752 SNHG12Q9BXW3 62 aa14.82□□□□□ -0.04
USP6NL-204ENST00000606752 IGKV3OR2-268A0A0C4DH90 116 aa14.81□□□□□ -0.04
USP6NL-204ENST00000606752 J3QQQ9 107 aa14.81□□□□□ -0.04
USP6NL-204ENST00000606752 PLEKHB2Q96CS7 222 aa14.8□□□□□ -0.04
USP6NL-204ENST00000606752 IGHV3-64A0A075B6Q5 118 aa14.8□□□□□ -0.04
USP6NL-204ENST00000606752 IGHV1-58A0A0C4DH39 117 aa14.8□□□□□ -0.04
USP6NL-204ENST00000606752 TSPEAR-AS2P59090 65 aa14.8□□□□□ -0.04
USP6NL-204ENST00000606752 HIGD1BQ9P298 99 aa14.8□□□□□ -0.04
USP6NL-204ENST00000606752 ZNF815PA8K554 130 aa14.79□□□□□ -0.04
USP6NL-204ENST00000606752 NHLRC4P0CG21 123 aaPredicted RBP14.79□□□□□ -0.04
USP6NL-204ENST00000606752 LGALS3P17931 250 aaKnown RBP14.79□□□□□ -0.04
USP6NL-204ENST00000606752 DNAH9Q9NYC9 4486 aa14.79□□□□□ -0.04
USP6NL-204ENST00000606752 TRAV8-3A0A0A6YYJ7 113 aa14.78□□□□□ -0.04
USP6NL-204ENST00000606752 LINC00959A0A1B0GUT2 108 aa14.78□□□□□ -0.04
USP6NL-204ENST00000606752 SPINK8P0C7L1 97 aa14.78□□□□□ -0.04
USP6NL-204ENST00000606752 IGHV3-30-3P0DP02 117 aa14.78□□□□□ -0.04
USP6NL-204ENST00000606752 EREGO14944 169 aa14.78□□□□□ -0.04
USP6NL-204ENST00000606752 C15orf53Q8NAA6 179 aa14.78□□□□□ -0.04
USP6NL-204ENST00000606752 ANGP03950 147 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms