RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 PKIAP61925 76 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 RNASE13Q5GAN3 156 aaKnown RBP5.18□□□□□ -1.58
MSH6-211ENST00000606499 TTC32Q5I0X7 151 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 Q6ZR54 194 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 Q6ZUT4 128 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 LINC00269Q8N2A0 174 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 OR5A1Q8NGJ0 315 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 TMEM18Q96B42 140 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 OPRPNQ99935 248 aaPredicted RBP5.18□□□□□ -1.58
MSH6-211ENST00000606499 Q9HAA7 133 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 CYSLTR1Q9Y271 337 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 TRAV9-2A0A087WT02 112 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 A0A1B0GUV1 79 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 IBA57-AS1B1ANH7 110 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 NUPR1O60356 82 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 DGAT2L7PQ6IED9 249 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 FAM104AQ969W3 186 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 TOMM6Q96B49 74 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 CHCHD1Q96BP2 118 aaKnown RBP5.17□□□□□ -1.58
MSH6-211ENST00000606499 TMEM101Q96IK0 257 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 TIMM21Q9BVV7 248 aa5.17□□□□□ -1.58
MSH6-211ENST00000606499 PKD1P98161 4303 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 IGLV4-3A0A075B6K6 122 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 IGKV3OR2-268A0A0C4DH90 116 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 IGIPA6NJ69 53 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 K7EP13 123 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 HSBP1O75506 76 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 HBDP02042 147 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 CRPP02741 224 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 REG3AQ06141 175 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 ENHOQ6UWT2 76 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 FAM19A2Q8N3H0 131 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 ZNF664Q8N3J9 261 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 C10orf126Q8N4M7 172 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 UBE2WQ96B02 151 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 SCGB3A1Q96QR1 104 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 CDC42SE2Q9NRR3 84 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 SPANXA1Q9NS26 97 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 PRR34Q9NV39 138 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 PYGO1Q9Y3Y4 419 aa5.16□□□□□ -1.58
MSH6-211ENST00000606499 CSDC2Q9Y534 153 aaKnown RBP5.16□□□□□ -1.58
MSH6-211ENST00000606499 FAT2Q9NYQ8 4349 aa5.15□□□□□ -1.58
MSH6-211ENST00000606499 DNAH17Q9UFH2 4485 aa5.15□□□□□ -1.58
MSH6-211ENST00000606499 IGLV10-54A0A075B6I4 117 aa5.15□□□□□ -1.59
MSH6-211ENST00000606499 G0S2P27469 103 aa5.15□□□□□ -1.59
MSH6-211ENST00000606499 NDUFA6P56556 154 aa5.15□□□□□ -1.59
MSH6-211ENST00000606499 SMAGPQ0VAQ4 97 aa5.15□□□□□ -1.59
MSH6-211ENST00000606499 PDZD11Q5EBL8 140 aa5.15□□□□□ -1.59
MSH6-211ENST00000606499 ZC2HC1BQ5TFG8 222 aa5.15□□□□□ -1.59
MSH6-211ENST00000606499 ERASQ7Z444 233 aa5.15□□□□□ -1.59
MSH6-211ENST00000606499 IFITM10A6NMD0 228 aa5.14□□□□□ -1.59
MSH6-211ENST00000606499 MRPS36P82909 103 aaKnown RBP5.14□□□□□ -1.59
MSH6-211ENST00000606499 COA6Q5JTJ3 125 aaKnown RBP5.14□□□□□ -1.59
MSH6-211ENST00000606499 LINC00173Q6ZV60 143 aa5.14□□□□□ -1.59
MSH6-211ENST00000606499 C6orf223Q8N319 242 aa5.14□□□□□ -1.59
MSH6-211ENST00000606499 TMEM141Q96I45 108 aa5.14□□□□□ -1.59
MSH6-211ENST00000606499 TIMM17AQ99595 171 aa5.14□□□□□ -1.59
MSH6-211ENST00000606499 HECTD4Q9Y4D8 3996 aa5.14□□□□□ -1.59
MSH6-211ENST00000606499 IGKV2D-24A0A075B6R9 120 aa5.13□□□□□ -1.59
MSH6-211ENST00000606499 TRAV8-3A0A0A6YYJ7 113 aa5.13□□□□□ -1.59
MSH6-211ENST00000606499 TRAV13-1A0A0B4J241 112 aa5.13□□□□□ -1.59
MSH6-211ENST00000606499 LINC00959A0A1B0GUT2 108 aa5.13□□□□□ -1.59
MSH6-211ENST00000606499 FABP4P15090 132 aa5.13□□□□□ -1.59
MSH6-211ENST00000606499 MIAQ16674 131 aa5.13□□□□□ -1.59
MSH6-211ENST00000606499 C1orf134Q5TEV5 83 aa5.13□□□□□ -1.59
MSH6-211ENST00000606499 Q6ZN92 141 aa5.13□□□□□ -1.59
MSH6-211ENST00000606499 Q6ZRN7 208 aaPredicted RBP5.13□□□□□ -1.59
MSH6-211ENST00000606499 LINC01549A6NIU2 74 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.12□□□□□ -1.59
MSH6-211ENST00000606499 RTL8CO15255 209 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 CCL25O15444 150 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 NPSP0C0P6 89 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 XCL1P47992 114 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 KRTAP26-1Q6PEX3 210 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 TEX43Q6ZNM6 134 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 BAALCQ8WXS3 180 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 AMELXQ99217 191 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 C1orf43Q9BWL3 253 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 VCX2Q9H322 139 aa5.12□□□□□ -1.59
MSH6-211ENST00000606499 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
MSH6-211ENST00000606499 DNAH11Q96DT5 4516 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 TRAV8-4A0A0B4J246 113 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 PRSS29PA6NIE9 313 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 ATP5LO75964 103 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 LEPROTL1O95214 131 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 SS18Q15532 418 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 PAPPA-AS1Q5QFB9 102 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 NFE4Q86UQ8 179 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 MAPKAPK5-AS1Q8N8E1 139 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 CHCHD10Q8WYQ3 142 aaPredicted RBP5.11□□□□□ -1.59
MSH6-211ENST00000606499 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 RMI2Q96E14 147 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 C2orf88Q9BSF0 95 aa5.11□□□□□ -1.59
MSH6-211ENST00000606499 GAGE12HA6NDE8 117 aa5.1□□□□□ -1.59
MSH6-211ENST00000606499 H0Y8G0 127 aa5.1□□□□□ -1.59
MSH6-211ENST00000606499 LECT2O14960 151 aa5.1□□□□□ -1.59
MSH6-211ENST00000606499 PSCAO43653 123 aa5.1□□□□□ -1.59
MSH6-211ENST00000606499 S100A6P06703 90 aa5.1□□□□□ -1.59
MSH6-211ENST00000606499 UBE2D1P51668 147 aa5.1□□□□□ -1.59
MSH6-211ENST00000606499 PMVKQ15126 192 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms