RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 Q6ZRN7 208 aaPredicted RBP13.96□□□□□ -0.17
GRAMD1A-214ENST00000603907 MAPKAPK5-AS1Q8N8E1 139 aa13.96□□□□□ -0.17
GRAMD1A-214ENST00000603907 TIMM21Q9BVV7 248 aa13.96□□□□□ -0.17
GRAMD1A-214ENST00000603907 TM2D2Q9BX73 214 aa13.96□□□□□ -0.17
GRAMD1A-214ENST00000603907 IGLV4-60A0A075B6I1 120 aa13.95□□□□□ -0.18
GRAMD1A-214ENST00000603907 G0S2P27469 103 aa13.95□□□□□ -0.18
GRAMD1A-214ENST00000603907 IFI27P40305 119 aaPredicted RBP13.95□□□□□ -0.18
GRAMD1A-214ENST00000603907 MIAQ16674 131 aa13.95□□□□□ -0.18
GRAMD1A-214ENST00000603907 PRSS3P2Q8NHM4 247 aa13.95□□□□□ -0.18
GRAMD1A-214ENST00000603907 Q9HAA7 133 aa13.95□□□□□ -0.18
GRAMD1A-214ENST00000603907 ENHOQ6UWT2 76 aa13.94□□□□□ -0.18
GRAMD1A-214ENST00000603907 LINC00269Q8N2A0 174 aa13.94□□□□□ -0.18
GRAMD1A-214ENST00000603907 OR5A1Q8NGJ0 315 aa13.94□□□□□ -0.18
GRAMD1A-214ENST00000603907 SCO1O75880 301 aa13.93□□□□□ -0.18
GRAMD1A-214ENST00000603907 REG3AQ06141 175 aa13.93□□□□□ -0.18
GRAMD1A-214ENST00000603907 DGAT2L7PQ6IED9 249 aa13.93□□□□□ -0.18
GRAMD1A-214ENST00000603907 UBE2D4Q9Y2X8 147 aa13.93□□□□□ -0.18
GRAMD1A-214ENST00000603907 LINC01546A6NGU7 62 aa13.92□□□□□ -0.18
GRAMD1A-214ENST00000603907 SPANXA1Q9NS26 97 aa13.92□□□□□ -0.18
GRAMD1A-214ENST00000603907 TRAV8-4A0A0B4J246 113 aa13.91□□□□□ -0.18
GRAMD1A-214ENST00000603907 C18orf32Q8TCD1 76 aa13.91□□□□□ -0.18
GRAMD1A-214ENST00000603907 PSCAO43653 123 aa13.9□□□□□ -0.18
GRAMD1A-214ENST00000603907 FA2HQ7L5A8 372 aa13.9□□□□□ -0.18
GRAMD1A-214ENST00000603907 C1orf43Q9BWL3 253 aa13.9□□□□□ -0.18
GRAMD1A-214ENST00000603907 CDC42SE2Q9NRR3 84 aa13.9□□□□□ -0.18
GRAMD1A-214ENST00000603907 CYSLTR1Q9Y271 337 aa13.9□□□□□ -0.18
GRAMD1A-214ENST00000603907 HSPG2P98160 4391 aa13.9□□□□□ -0.19
GRAMD1A-214ENST00000603907 LINC01549A6NIU2 74 aa13.89□□□□□ -0.19
GRAMD1A-214ENST00000603907 TRGC2P03986 189 aa13.89□□□□□ -0.19
GRAMD1A-214ENST00000603907 RAB5BP61020 215 aa13.89□□□□□ -0.19
GRAMD1A-214ENST00000603907 RPL39P62891 51 aaKnown RBP13.89□□□□□ -0.19
GRAMD1A-214ENST00000603907 TNP2Q05952 138 aa13.89□□□□□ -0.19
GRAMD1A-214ENST00000603907 ZNF664Q8N3J9 261 aa13.89□□□□□ -0.19
GRAMD1A-214ENST00000603907 PYGO1Q9Y3Y4 419 aa13.89□□□□□ -0.19
GRAMD1A-214ENST00000603907 IGKV2D-24A0A075B6R9 120 aa13.88□□□□□ -0.19
GRAMD1A-214ENST00000603907 MRPS36P82909 103 aaKnown RBP13.88□□□□□ -0.19
GRAMD1A-214ENST00000603907 CLPSL2Q6UWE3 100 aa13.88□□□□□ -0.19
GRAMD1A-214ENST00000603907 C2orf66Q6UXQ4 117 aa13.88□□□□□ -0.19
GRAMD1A-214ENST00000603907 NPSP0C0P6 89 aa13.86□□□□□ -0.19
GRAMD1A-214ENST00000603907 LINC00614P0C842 121 aa13.86□□□□□ -0.19
GRAMD1A-214ENST00000603907 Q8N1X5 172 aa13.86□□□□□ -0.19
GRAMD1A-214ENST00000603907 AP5S1Q9NUS5 200 aa13.86□□□□□ -0.19
GRAMD1A-214ENST00000603907 CCL25O15444 150 aa13.84□□□□□ -0.19
GRAMD1A-214ENST00000603907 TOMM6Q96B49 74 aa13.84□□□□□ -0.19
GRAMD1A-214ENST00000603907 EREGO14944 169 aa13.83□□□□□ -0.2
GRAMD1A-214ENST00000603907 Q6ZUT4 128 aa13.83□□□□□ -0.2
GRAMD1A-214ENST00000603907 A0A087WTM6 91 aa13.81□□□□□ -0.2
GRAMD1A-214ENST00000603907 IGKV3OR2-268A0A0C4DH90 116 aa13.81□□□□□ -0.2
GRAMD1A-214ENST00000603907 LINC00959A0A1B0GUT2 108 aa13.81□□□□□ -0.2
GRAMD1A-214ENST00000603907 SS18Q15532 418 aa13.81□□□□□ -0.2
GRAMD1A-214ENST00000603907 CHCHD1Q96BP2 118 aaKnown RBP13.81□□□□□ -0.2
GRAMD1A-214ENST00000603907 URB1-AS1Q96HZ7 61 aa13.81□□□□□ -0.2
GRAMD1A-214ENST00000603907 TIMM17AQ99595 171 aa13.81□□□□□ -0.2
GRAMD1A-214ENST00000603907 IGLV10-54A0A075B6I4 117 aa13.8□□□□□ -0.2
GRAMD1A-214ENST00000603907 LRCOL1A6NCL2 159 aa13.8□□□□□ -0.2
GRAMD1A-214ENST00000603907 IGIPA6NJ69 53 aa13.8□□□□□ -0.2
GRAMD1A-214ENST00000603907 PAPPA-AS1Q5QFB9 102 aa13.8□□□□□ -0.2
GRAMD1A-214ENST00000603907 KRTAP26-1Q6PEX3 210 aa13.8□□□□□ -0.2
GRAMD1A-214ENST00000603907 FAM104AQ969W3 186 aa13.8□□□□□ -0.2
GRAMD1A-214ENST00000603907 TMEM141Q96I45 108 aa13.8□□□□□ -0.2
GRAMD1A-214ENST00000603907 IGLV4-3A0A075B6K6 122 aa13.79□□□□□ -0.2
GRAMD1A-214ENST00000603907 Q6ZN92 141 aa13.79□□□□□ -0.2
GRAMD1A-214ENST00000603907 ERASQ7Z444 233 aa13.79□□□□□ -0.2
GRAMD1A-214ENST00000603907 C1orf196B1AJZ1 125 aa13.78□□□□□ -0.2
GRAMD1A-214ENST00000603907 BAGE3Q86Y29 109 aa13.78□□□□□ -0.2
GRAMD1A-214ENST00000603907 CHCHD10Q8WYQ3 142 aaPredicted RBP13.78□□□□□ -0.2
GRAMD1A-214ENST00000603907 HBDP02042 147 aa13.77□□□□□ -0.21
GRAMD1A-214ENST00000603907 RNASE13Q5GAN3 156 aaKnown RBP13.77□□□□□ -0.21
GRAMD1A-214ENST00000603907 SCGB3A1Q96QR1 104 aa13.77□□□□□ -0.21
GRAMD1A-214ENST00000603907 OPRPNQ99935 248 aaPredicted RBP13.77□□□□□ -0.21
GRAMD1A-214ENST00000603907 TEX43Q6ZNM6 134 aa13.76□□□□□ -0.21
GRAMD1A-214ENST00000603907 SPATA12Q7Z6I5 190 aa13.76□□□□□ -0.21
GRAMD1A-214ENST00000603907 TRAV13-1A0A0B4J241 112 aa13.75□□□□□ -0.21
GRAMD1A-214ENST00000603907 GAGE12HA6NDE8 117 aa13.75□□□□□ -0.21
GRAMD1A-214ENST00000603907 IFITM10A6NMD0 228 aa13.75□□□□□ -0.21
GRAMD1A-214ENST00000603907 C14orf177Q52M58 125 aa13.75□□□□□ -0.21
GRAMD1A-214ENST00000603907 BAALCQ8WXS3 180 aa13.75□□□□□ -0.21
GRAMD1A-214ENST00000603907 AMELXQ99217 191 aa13.75□□□□□ -0.21
GRAMD1A-214ENST00000603907 C2orf88Q9BSF0 95 aa13.75□□□□□ -0.21
GRAMD1A-214ENST00000603907 VCX2Q9H322 139 aa13.75□□□□□ -0.21
GRAMD1A-214ENST00000603907 A0A096LNJ9 63 aa13.74□□□□□ -0.21
GRAMD1A-214ENST00000603907 CD164L2Q6UWJ8 174 aa13.74□□□□□ -0.21
GRAMD1A-214ENST00000603907 LRP1BQ9NZR2 4599 aa13.74□□□□□ -0.21
GRAMD1A-214ENST00000603907 HSBP1O75506 76 aa13.73□□□□□ -0.21
GRAMD1A-214ENST00000603907 XCL1P47992 114 aa13.72□□□□□ -0.21
GRAMD1A-214ENST00000603907 FOXI1Q12951 378 aa13.72□□□□□ -0.21
GRAMD1A-214ENST00000603907 Q8N814 137 aa13.72□□□□□ -0.21
GRAMD1A-214ENST00000603907 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST1H2BKO60814 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST1H2BJP06899 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST1H2BOP23527 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST1H2BBP33778 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST1H2BDP58876 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST1H2BCP62807 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST2H2BEQ16778 126 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 PDZD11Q5EBL8 140 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 CFAP161Q6P656 301 aa13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 NTN5Q8WTR8 489 aaPredicted RBP13.71□□□□□ -0.21
GRAMD1A-214ENST00000603907 HIST1H2BHQ93079 126 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms