RNA–Protein interactions for RNA: ENST00000603543.1

AC009643.2-201, humanhuman

BASIC

Gene AC009643.2, Length 1,448 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009643.2-201ENST00000603543 UBE2D3P61077 147 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 UBE2D2P62837 147 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 CTAG1AP78358 180 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 EGFEM1PQ0D2K5 195 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 GAGE1Q13065 139 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 GAGE4Q13068 117 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 GAGE5Q13069 117 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 COTL1Q14019 142 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 SLC25A34Q6PIV7 304 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 SLC25A29Q8N8R3 303 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 ZNRF2Q8NHG8 242 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 KIR2DL5BQ8NHK3 375 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 TMEM141Q96I45 108 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 SNHG12Q9BXW3 62 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 PKD1L1Q8TDX9 2849 aa3.48□□□□□ -1.85
AC009643.2-201ENST00000603543 IGLV4-3A0A075B6K6 122 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 TRBV7-3A0A075B6L6 115 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 IGKV2D-26A0A0A0MRZ7 120 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 TRGV4A0A0C4DH28 118 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 SMIM9A6NGZ8 99 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 LINC01549A6NIU2 74 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 C11orf86A6NJI1 115 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 G3V4G9 280 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 DEFB4AO15263 64 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 LINC00694P0DN24 101 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 DEFB130BP0DP73 79 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 DEFB130AP0DP74 79 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 NMUP48645 174 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 RPL36AP83881 106 aaKnown RBP3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 PMVKQ15126 192 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 RNASE13Q5GAN3 156 aaKnown RBP3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 FAM222AQ5U5X8 452 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 Q6ZUT4 128 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 C2orf91Q6ZV80 131 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 MRPL52Q86TS9 123 aaKnown RBP3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 PCP2Q8IVA1 136 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 Q8NAQ8 132 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 OR11H2Q8NH07 326 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 RPL36ALQ969Q0 106 aaKnown RBP3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 OPRPNQ99935 248 aaPredicted RBP3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 RETNQ9HD89 108 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 CELA1Q9UNI1 258 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 UBE2D4Q9Y2X8 147 aa3.47□□□□□ -1.85
AC009643.2-201ENST00000603543 TRBV6-4A0A1B0GX49 114 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 LYRM9A8MSI8 78 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 M0R143 59 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 BATFQ16520 125 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 CEMP1Q6PRD7 247 aaPredicted RBP3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 SBSPONQ8IVN8 264 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 FAM104AQ969W3 186 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 CHAC1Q9BUX1 264 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 CST9LQ9H4G1 147 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 HHLA3Q9XRX5 114 aa3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 MRPS16Q9Y3D3 137 aaKnown RBP3.46□□□□□ -1.86
AC009643.2-201ENST00000603543 CIDEAO60543 219 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 MIFP14174 115 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 NTM-AS1Q6ZSK4 140 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 DAZ4Q86SG3 579 aaKnown RBP3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 BOD1L2Q8IYS8 172 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 RNF183Q96D59 192 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 AMELXQ99217 191 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 C2orf88Q9BSF0 95 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 PRADC1Q9BSG0 188 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 DAZ3Q9NR90 486 aaKnown RBP3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 SPANXA1Q9NS26 97 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 PYGO1Q9Y3Y4 419 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 NBEAL2Q6ZNJ1 2754 aa3.45□□□□□ -1.86
AC009643.2-201ENST00000603543 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 A0A1B0GV90 55 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 E9PLD3 99 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 DLEU1O43261 78 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 ZNF22P17026 224 aaPredicted RBP3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 HINT1P49773 126 aaPredicted RBP3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 CRYBA4P53673 196 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 TSPEAR-AS2P59090 65 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 TMEM97Q5BJF2 176 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 NFE4Q86UQ8 179 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 VCX2Q9H322 139 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 TRAV8-6A0A0B4J262 113 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 A0A0J9YXV3 536 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 UBE2L6O14933 153 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 NPSP0C0P6 89 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 HERVK_113P61574 105 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 DAD1P61803 113 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 MRPS36P82909 103 aaKnown RBP3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 MPV17L2Q567V2 206 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 PAPPA-AS1Q5QFB9 102 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 BVES-AS1Q5T3Y7 98 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 TMEM170BQ5T4T1 132 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 MAPKAPK5-AS1Q8N8E1 139 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 TMEM243Q9BU79 118 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 TIMM21Q9BVV7 248 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 GTSF1LQ9H1H1 148 aa3.44□□□□□ -1.86
AC009643.2-201ENST00000603543 HUWE1Q7Z6Z7 4374 aaKnown RBP3.43□□□□□ -1.86
AC009643.2-201ENST00000603543 COL6A5A8TX70 2615 aa3.43□□□□□ -1.86
AC009643.2-201ENST00000603543 TENM3Q9P273 2699 aa3.43□□□□□ -1.86
AC009643.2-201ENST00000603543 TRBV25-1A0A075B6N4 114 aa3.43□□□□□ -1.86
AC009643.2-201ENST00000603543 IGHV3-64A0A075B6Q5 118 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms