RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CDC42SE2Q9NRR3 84 aa9.22□□□□□ -0.93
RNF40-212ENST00000602784 UBE2D4Q9Y2X8 147 aa9.22□□□□□ -0.93
RNF40-212ENST00000602784 ORMDL2Q53FV1 153 aa9.21□□□□□ -0.94
RNF40-212ENST00000602784 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
RNF40-212ENST00000602784 ZNF664Q8N3J9 261 aa9.21□□□□□ -0.94
RNF40-212ENST00000602784 MAPKAPK5-AS1Q8N8E1 139 aa9.21□□□□□ -0.94
RNF40-212ENST00000602784 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.94
RNF40-212ENST00000602784 PKD1P98161 4303 aa9.2□□□□□ -0.94
RNF40-212ENST00000602784 G0S2P27469 103 aa9.2□□□□□ -0.94
RNF40-212ENST00000602784 IFI27P40305 119 aaPredicted RBP9.2□□□□□ -0.94
RNF40-212ENST00000602784 KRTAP26-1Q6PEX3 210 aa9.2□□□□□ -0.94
RNF40-212ENST00000602784 LINC01546A6NGU7 62 aa9.19□□□□□ -0.94
RNF40-212ENST00000602784 RPL39P62891 51 aaKnown RBP9.19□□□□□ -0.94
RNF40-212ENST00000602784 PRSS3P2Q8NHM4 247 aa9.19□□□□□ -0.94
RNF40-212ENST00000602784 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
RNF40-212ENST00000602784 PYGO1Q9Y3Y4 419 aa9.19□□□□□ -0.94
RNF40-212ENST00000602784 CCL25O15444 150 aa9.18□□□□□ -0.94
RNF40-212ENST00000602784 MRPS36P82909 103 aaKnown RBP9.18□□□□□ -0.94
RNF40-212ENST00000602784 IGLV10-54A0A075B6I4 117 aa9.17□□□□□ -0.94
RNF40-212ENST00000602784 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
RNF40-212ENST00000602784 BAALCQ8WXS3 180 aa9.17□□□□□ -0.94
RNF40-212ENST00000602784 CYSLTR1Q9Y271 337 aa9.17□□□□□ -0.94
RNF40-212ENST00000602784 EPPK1P58107 5090 aaKnown RBP9.17□□□□□ -0.94
RNF40-212ENST00000602784 LINC00959A0A1B0GUT2 108 aa9.16□□□□□ -0.94
RNF40-212ENST00000602784 COLCA2A8K830 154 aa9.16□□□□□ -0.94
RNF40-212ENST00000602784 NPSP0C0P6 89 aa9.16□□□□□ -0.94
RNF40-212ENST00000602784 KRTAP10-2P60368 255 aa9.16□□□□□ -0.94
RNF40-212ENST00000602784 CDPF1Q6NVV7 123 aa9.16□□□□□ -0.94
RNF40-212ENST00000602784 C2orf66Q6UXQ4 117 aa9.16□□□□□ -0.94
RNF40-212ENST00000602784 Q8N814 137 aa9.16□□□□□ -0.94
RNF40-212ENST00000602784 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
RNF40-212ENST00000602784 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
RNF40-212ENST00000602784 IGKV3OR2-268A0A0C4DH90 116 aa9.15□□□□□ -0.94
RNF40-212ENST00000602784 LINC01549A6NIU2 74 aa9.15□□□□□ -0.94
RNF40-212ENST00000602784 WFDC2Q14508 124 aa9.15□□□□□ -0.94
RNF40-212ENST00000602784 SS18Q15532 418 aa9.15□□□□□ -0.94
RNF40-212ENST00000602784 C14orf177Q52M58 125 aa9.15□□□□□ -0.94
RNF40-212ENST00000602784 Q6ZUT4 128 aa9.15□□□□□ -0.94
RNF40-212ENST00000602784 C18orf32Q8TCD1 76 aa9.15□□□□□ -0.94
RNF40-212ENST00000602784 CHCHD10Q8WYQ3 142 aaPredicted RBP9.15□□□□□ -0.94
RNF40-212ENST00000602784 C1orf196B1AJZ1 125 aa9.14□□□□□ -0.95
RNF40-212ENST00000602784 FA2HQ7L5A8 372 aa9.14□□□□□ -0.95
RNF40-212ENST00000602784 TOMM6Q96B49 74 aa9.14□□□□□ -0.95
RNF40-212ENST00000602784 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
RNF40-212ENST00000602784 GAGE12HA6NDE8 117 aa9.13□□□□□ -0.95
RNF40-212ENST00000602784 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
RNF40-212ENST00000602784 LECT2O14960 151 aa9.13□□□□□ -0.95
RNF40-212ENST00000602784 LINC00614P0C842 121 aa9.13□□□□□ -0.95
RNF40-212ENST00000602784 RAB5BP61020 215 aa9.13□□□□□ -0.95
RNF40-212ENST00000602784 AP5S1Q9NUS5 200 aa9.13□□□□□ -0.95
RNF40-212ENST00000602784 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
RNF40-212ENST00000602784 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
RNF40-212ENST00000602784 C16orf90A8MZG2 172 aa9.12□□□□□ -0.95
RNF40-212ENST00000602784 USP17L23D6RBM5 183 aa9.12□□□□□ -0.95
RNF40-212ENST00000602784 S100A1P23297 94 aa9.12□□□□□ -0.95
RNF40-212ENST00000602784 CD164L2Q6UWJ8 174 aa9.12□□□□□ -0.95
RNF40-212ENST00000602784 TMEM141Q96I45 108 aa9.12□□□□□ -0.95
RNF40-212ENST00000602784 OPRPNQ99935 248 aaPredicted RBP9.12□□□□□ -0.95
RNF40-212ENST00000602784 TRGC2P03986 189 aa9.11□□□□□ -0.95
RNF40-212ENST00000602784 XCL1P47992 114 aa9.11□□□□□ -0.95
RNF40-212ENST00000602784 FOXI1Q12951 378 aa9.11□□□□□ -0.95
RNF40-212ENST00000602784 RNASE13Q5GAN3 156 aaKnown RBP9.11□□□□□ -0.95
RNF40-212ENST00000602784 PAPPA-AS1Q5QFB9 102 aa9.11□□□□□ -0.95
RNF40-212ENST00000602784 CFAP161Q6P656 301 aa9.11□□□□□ -0.95
RNF40-212ENST00000602784 ERASQ7Z444 233 aa9.11□□□□□ -0.95
RNF40-212ENST00000602784 TIMM17AQ99595 171 aa9.11□□□□□ -0.95
RNF40-212ENST00000602784 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
RNF40-212ENST00000602784 SCO1O75880 301 aa9.1□□□□□ -0.95
RNF40-212ENST00000602784 Q6ZN92 141 aa9.1□□□□□ -0.95
RNF40-212ENST00000602784 URB1-AS1Q96HZ7 61 aa9.1□□□□□ -0.95
RNF40-212ENST00000602784 AMELXQ99217 191 aa9.09□□□□□ -0.95
RNF40-212ENST00000602784 VCX2Q9H322 139 aa9.09□□□□□ -0.95
RNF40-212ENST00000602784 IGLV5-52A0A0A0MRZ9 124 aa9.08□□□□□ -0.96
RNF40-212ENST00000602784 IFITM10A6NMD0 228 aa9.08□□□□□ -0.96
RNF40-212ENST00000602784 PRSS1P07477 247 aa9.08□□□□□ -0.96
RNF40-212ENST00000602784 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
RNF40-212ENST00000602784 CHCHD1Q96BP2 118 aaKnown RBP9.08□□□□□ -0.96
RNF40-212ENST00000602784 SCGB3A1Q96QR1 104 aa9.08□□□□□ -0.96
RNF40-212ENST00000602784 C2orf88Q9BSF0 95 aa9.08□□□□□ -0.96
RNF40-212ENST00000602784 GCSHP23434 173 aa9.07□□□□□ -0.96
RNF40-212ENST00000602784 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
RNF40-212ENST00000602784 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.06□□□□□ -0.96
RNF40-212ENST00000602784 A0A096LNJ9 63 aa9.06□□□□□ -0.96
RNF40-212ENST00000602784 COX7A2LO14548 114 aa9.06□□□□□ -0.96
RNF40-212ENST00000602784 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
RNF40-212ENST00000602784 FUSP35637 526 aaKnown RBP eCLIP9.06□□□□□ -0.96
RNF40-212ENST00000602784 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
RNF40-212ENST00000602784 BIRC6Q9NR09 4857 aa9.05□□□□□ -0.96
RNF40-212ENST00000602784 GVQW2A0A096LPI5 108 aaPredicted RBP9.05□□□□□ -0.96
RNF40-212ENST00000602784 IGHV3OR16-9A0A0B4J2B5 98 aa9.05□□□□□ -0.96
RNF40-212ENST00000602784 IGHV1-58A0A0C4DH39 117 aa9.05□□□□□ -0.96
RNF40-212ENST00000602784 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
RNF40-212ENST00000602784 HBDP02042 147 aa9.05□□□□□ -0.96
RNF40-212ENST00000602784 UBE2D1P51668 147 aa9.05□□□□□ -0.96
RNF40-212ENST00000602784 FAM19A3Q7Z5A8 133 aa9.05□□□□□ -0.96
RNF40-212ENST00000602784 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
RNF40-212ENST00000602784 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
RNF40-212ENST00000602784 PDZD11Q5EBL8 140 aa9.04□□□□□ -0.96
RNF40-212ENST00000602784 LINC00242Q5T6M2 205 aa9.04□□□□□ -0.96
RNF40-212ENST00000602784 BAGE3Q86Y29 109 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms