RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251		A0A1B0GXF2	115 aa		11.94	□□□□□ -0.5
LTBP4-231	ENST00000602251	FCER1G	P30273	86 aa		11.94	□□□□□ -0.5
LTBP4-231	ENST00000602251	POLR2K	P53803	58 aa	Known RBP	11.94	□□□□□ -0.5
LTBP4-231	ENST00000602251	SUMO2	P61956	95 aa	Known RBP	11.94	□□□□□ -0.5
LTBP4-231	ENST00000602251	C20orf203	Q8NBC4	194 aa		11.94	□□□□□ -0.5
LTBP4-231	ENST00000602251	KIR2DL4	Q99706	377 aa		11.94	□□□□□ -0.5
LTBP4-231	ENST00000602251	TMEM242	Q9NWH2	141 aa		11.94	□□□□□ -0.5
LTBP4-231	ENST00000602251	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.93	□□□□□ -0.5
LTBP4-231	ENST00000602251	TRBV27	A0A0K0K1C4	114 aa		11.93	□□□□□ -0.5
LTBP4-231	ENST00000602251	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.93	□□□□□ -0.5
LTBP4-231	ENST00000602251	HLA-DQA1	P01909	254 aa		11.93	□□□□□ -0.5
LTBP4-231	ENST00000602251	BTF3L4	Q96K17	158 aa		11.93	□□□□□ -0.5
LTBP4-231	ENST00000602251	SEC11C	Q9BY50	192 aa		11.93	□□□□□ -0.5
LTBP4-231	ENST00000602251	TSHB	P01222	138 aa		11.92	□□□□□ -0.5
LTBP4-231	ENST00000602251	ADCYAP1	P18509	176 aa		11.92	□□□□□ -0.5
LTBP4-231	ENST00000602251	NRAC	Q8N912	160 aa		11.92	□□□□□ -0.5
LTBP4-231	ENST00000602251	TMEM101	Q96IK0	257 aa		11.92	□□□□□ -0.5
LTBP4-231	ENST00000602251	IGLV10-54	A0A075B6I4	117 aa		11.91	□□□□□ -0.5
LTBP4-231	ENST00000602251	TRAV8-4	A0A0B4J246	113 aa		11.91	□□□□□ -0.5
LTBP4-231	ENST00000602251		D6R8Y8	96 aa		11.91	□□□□□ -0.5
LTBP4-231	ENST00000602251	PPBP	P02775	128 aa		11.91	□□□□□ -0.5
LTBP4-231	ENST00000602251	FGF6	P10767	208 aa		11.91	□□□□□ -0.5
LTBP4-231	ENST00000602251	C20orf78	Q9BR46	151 aa		11.91	□□□□□ -0.5
LTBP4-231	ENST00000602251	IGKV3OR2-268	A0A0C4DH90	116 aa		11.9	□□□□□ -0.5
LTBP4-231	ENST00000602251	TNFRSF6B	O95407	300 aa		11.9	□□□□□ -0.5
LTBP4-231	ENST00000602251	ZNF25	P17030	456 aa	Predicted RBP	11.9	□□□□□ -0.5
LTBP4-231	ENST00000602251	C14orf177	Q52M58	125 aa		11.9	□□□□□ -0.5
LTBP4-231	ENST00000602251	CTDSP1	Q9GZU7	261 aa		11.9	□□□□□ -0.5
LTBP4-231	ENST00000602251	TRBV24-1	A0A075B6N3	115 aa		11.89	□□□□□ -0.51
LTBP4-231	ENST00000602251	C7orf77	A4D0Y5	90 aa		11.89	□□□□□ -0.51
LTBP4-231	ENST00000602251		Q6ZRU5	148 aa		11.89	□□□□□ -0.51
LTBP4-231	ENST00000602251	IMMP2L	Q96T52	175 aa		11.89	□□□□□ -0.51
LTBP4-231	ENST00000602251	ESD	P10768	282 aa		11.88	□□□□□ -0.51
LTBP4-231	ENST00000602251	SMAGP	Q0VAQ4	97 aa		11.88	□□□□□ -0.51
LTBP4-231	ENST00000602251	DGAT2L7P	Q6IED9	249 aa		11.88	□□□□□ -0.51
LTBP4-231	ENST00000602251	TMEM136	Q6ZRR5	245 aa		11.88	□□□□□ -0.51
LTBP4-231	ENST00000602251	ORMDL3	Q8N138	153 aa		11.88	□□□□□ -0.51
LTBP4-231	ENST00000602251	OR5A1	Q8NGJ0	315 aa		11.88	□□□□□ -0.51
LTBP4-231	ENST00000602251	PHOX2A	O14813	284 aa		11.87	□□□□□ -0.51
LTBP4-231	ENST00000602251	TCAP	O15273	167 aa		11.87	□□□□□ -0.51
LTBP4-231	ENST00000602251	S100P	P25815	95 aa		11.87	□□□□□ -0.51
LTBP4-231	ENST00000602251	TMEM18	Q96B42	140 aa		11.87	□□□□□ -0.51
LTBP4-231	ENST00000602251	USP17L23	D6RBM5	183 aa		11.86	□□□□□ -0.51
LTBP4-231	ENST00000602251	NPY	P01303	97 aa		11.86	□□□□□ -0.51
LTBP4-231	ENST00000602251	PRELID3A	Q96N28	172 aa		11.86	□□□□□ -0.51
LTBP4-231	ENST00000602251	RPL32	P62910	135 aa	Known RBP	11.85	□□□□□ -0.51
LTBP4-231	ENST00000602251	SMIM2	Q9BVW6	85 aa		11.85	□□□□□ -0.51
LTBP4-231	ENST00000602251	TRAV9-1	A0A075B6T8	112 aa		11.83	□□□□□ -0.52
LTBP4-231	ENST00000602251	RAB5A	P20339	215 aa		11.83	□□□□□ -0.52
LTBP4-231	ENST00000602251	MRPL52	Q86TS9	123 aa	Known RBP	11.83	□□□□□ -0.52
LTBP4-231	ENST00000602251	LAMTOR2	Q9Y2Q5	125 aa		11.83	□□□□□ -0.52
LTBP4-231	ENST00000602251	C10orf91	Q5T1B1	145 aa		11.82	□□□□□ -0.52
LTBP4-231	ENST00000602251	KRTAP26-1	Q6PEX3	210 aa		11.82	□□□□□ -0.52
LTBP4-231	ENST00000602251	RPS10P5	Q9NQ39	176 aa		11.82	□□□□□ -0.52
LTBP4-231	ENST00000602251	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.82	□□□□□ -0.52
LTBP4-231	ENST00000602251	GAGE12H	A6NDE8	117 aa		11.81	□□□□□ -0.52
LTBP4-231	ENST00000602251	RHEB	Q15382	184 aa		11.81	□□□□□ -0.52
LTBP4-231	ENST00000602251	NDUFA5	Q16718	116 aa		11.81	□□□□□ -0.52
LTBP4-231	ENST00000602251	ZNF664	Q8N3J9	261 aa		11.81	□□□□□ -0.52
LTBP4-231	ENST00000602251	CLRN3	Q8NCR9	226 aa		11.81	□□□□□ -0.52
LTBP4-231	ENST00000602251	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.81	□□□□□ -0.52
LTBP4-231	ENST00000602251	MAP1LC3A	Q9H492	121 aa		11.81	□□□□□ -0.52
LTBP4-231	ENST00000602251	SS18	Q15532	418 aa		11.8	□□□□□ -0.52
LTBP4-231	ENST00000602251	CDC42SE2	Q9NRR3	84 aa		11.8	□□□□□ -0.52
LTBP4-231	ENST00000602251	LOC389332	A0A1B0GUA5	103 aa		11.79	□□□□□ -0.52
LTBP4-231	ENST00000602251	CFAP161	Q6P656	301 aa		11.79	□□□□□ -0.52
LTBP4-231	ENST00000602251	UBE2D4	Q9Y2X8	147 aa		11.79	□□□□□ -0.52
LTBP4-231	ENST00000602251	CSDC2	Q9Y534	153 aa	Known RBP	11.79	□□□□□ -0.52
LTBP4-231	ENST00000602251	LINC00959	A0A1B0GUT2	108 aa		11.78	□□□□□ -0.52
LTBP4-231	ENST00000602251	hDV102S1	A0JD36	115 aa		11.78	□□□□□ -0.52
LTBP4-231	ENST00000602251	APOC3	P02656	99 aa		11.78	□□□□□ -0.52
LTBP4-231	ENST00000602251	PRSS1	P07477	247 aa		11.78	□□□□□ -0.52
LTBP4-231	ENST00000602251	AP5S1	Q9NUS5	200 aa		11.78	□□□□□ -0.52
LTBP4-231	ENST00000602251	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.78	□□□□□ -0.52
LTBP4-231	ENST00000602251	PANO1	I0J062	215 aa		11.77	□□□□□ -0.53
LTBP4-231	ENST00000602251	XCL1	P47992	114 aa		11.77	□□□□□ -0.53
LTBP4-231	ENST00000602251	TIMM21	Q9BVV7	248 aa		11.77	□□□□□ -0.53
LTBP4-231	ENST00000602251	CCL25	O15444	150 aa		11.76	□□□□□ -0.53
LTBP4-231	ENST00000602251	RPL39	P62891	51 aa	Known RBP	11.76	□□□□□ -0.53
LTBP4-231	ENST00000602251	COX19	Q49B96	90 aa		11.76	□□□□□ -0.53
LTBP4-231	ENST00000602251	PRSS47	A8MTI9	375 aa		11.75	□□□□□ -0.53
LTBP4-231	ENST00000602251	SNAPIN	O95295	136 aa		11.75	□□□□□ -0.53
LTBP4-231	ENST00000602251	ODF1	Q14990	250 aa		11.75	□□□□□ -0.53
LTBP4-231	ENST00000602251	SVBP	Q8N300	66 aa		11.75	□□□□□ -0.53
LTBP4-231	ENST00000602251	C1orf196	B1AJZ1	125 aa		11.74	□□□□□ -0.53
LTBP4-231	ENST00000602251	KIAA1644	Q3SXP7	199 aa		11.74	□□□□□ -0.53
LTBP4-231	ENST00000602251	RNASE13	Q5GAN3	156 aa	Known RBP	11.74	□□□□□ -0.53
LTBP4-231	ENST00000602251		Q8N8P6	123 aa		11.74	□□□□□ -0.53
LTBP4-231	ENST00000602251	C9orf163	Q8N9P6	203 aa		11.74	□□□□□ -0.53
LTBP4-231	ENST00000602251	GNB1L	Q9BYB4	327 aa		11.74	□□□□□ -0.53
LTBP4-231	ENST00000602251	SPANXA1	Q9NS26	97 aa		11.74	□□□□□ -0.53
LTBP4-231	ENST00000602251	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.73	□□□□□ -0.53
LTBP4-231	ENST00000602251	TRAV13-1	A0A0B4J241	112 aa		11.73	□□□□□ -0.53
LTBP4-231	ENST00000602251	NXT2	Q9NPJ8	142 aa	Known RBP	11.73	□□□□□ -0.53
LTBP4-231	ENST00000602251	IFI27	P40305	119 aa	Predicted RBP	11.72	□□□□□ -0.53
LTBP4-231	ENST00000602251	FOXI1	Q12951	378 aa		11.72	□□□□□ -0.53
LTBP4-231	ENST00000602251	CD164L2	Q6UWJ8	174 aa		11.72	□□□□□ -0.53
LTBP4-231	ENST00000602251	SDIM1	Q6ZPB5	146 aa		11.72	□□□□□ -0.53
LTBP4-231	ENST00000602251		Q6ZUT4	128 aa		11.72	□□□□□ -0.53
LTBP4-231	ENST00000602251	MT-ND6	P03923	174 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms