RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 TM2D2Q9BX73 214 aa13.74□□□□□ -0.21
SIN3B-211ENST00000601141 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
SIN3B-211ENST00000601141 TNP2Q05952 138 aa13.72□□□□□ -0.21
SIN3B-211ENST00000601141 TIMM21Q9BVV7 248 aa13.72□□□□□ -0.21
SIN3B-211ENST00000601141 CYSLTR1Q9Y271 337 aa13.72□□□□□ -0.21
SIN3B-211ENST00000601141 CSDC2Q9Y534 153 aaKnown RBP13.72□□□□□ -0.21
SIN3B-211ENST00000601141 C2orf66Q6UXQ4 117 aa13.71□□□□□ -0.21
SIN3B-211ENST00000601141 ZNF664Q8N3J9 261 aa13.71□□□□□ -0.21
SIN3B-211ENST00000601141 CDC42SE2Q9NRR3 84 aa13.71□□□□□ -0.21
SIN3B-211ENST00000601141 SPANXA1Q9NS26 97 aa13.71□□□□□ -0.21
SIN3B-211ENST00000601141 COX11Q9Y6N1 276 aa13.71□□□□□ -0.21
SIN3B-211ENST00000601141 IGLV10-54A0A075B6I4 117 aa13.7□□□□□ -0.22
SIN3B-211ENST00000601141 G0S2P27469 103 aa13.69□□□□□ -0.22
SIN3B-211ENST00000601141 RNASE13Q5GAN3 156 aaKnown RBP13.69□□□□□ -0.22
SIN3B-211ENST00000601141 Q6ZUT4 128 aa13.69□□□□□ -0.22
SIN3B-211ENST00000601141 LINC01546A6NGU7 62 aa13.68□□□□□ -0.22
SIN3B-211ENST00000601141 AP5S1Q9NUS5 200 aa13.68□□□□□ -0.22
SIN3B-211ENST00000601141 DNAH17Q9UFH2 4485 aa13.68□□□□□ -0.22
SIN3B-211ENST00000601141 TRAV8-4A0A0B4J246 113 aa13.67□□□□□ -0.22
SIN3B-211ENST00000601141 LINC00614P0C842 121 aa13.67□□□□□ -0.22
SIN3B-211ENST00000601141 RAB5BP61020 215 aa13.67□□□□□ -0.22
SIN3B-211ENST00000601141 URB1-AS1Q96HZ7 61 aa13.67□□□□□ -0.22
SIN3B-211ENST00000601141 OPRPNQ99935 248 aaPredicted RBP13.67□□□□□ -0.22
SIN3B-211ENST00000601141 PYGO1Q9Y3Y4 419 aa13.66□□□□□ -0.22
SIN3B-211ENST00000601141 FAT2Q9NYQ8 4349 aa13.66□□□□□ -0.22
SIN3B-211ENST00000601141 TOMM6Q96B49 74 aa13.65□□□□□ -0.22
SIN3B-211ENST00000601141 MRPS36P82909 103 aaKnown RBP13.64□□□□□ -0.23
SIN3B-211ENST00000601141 BAGE3Q86Y29 109 aa13.64□□□□□ -0.23
SIN3B-211ENST00000601141 IGLV4-3A0A075B6K6 122 aa13.63□□□□□ -0.23
SIN3B-211ENST00000601141 LINC00959A0A1B0GUT2 108 aa13.63□□□□□ -0.23
SIN3B-211ENST00000601141 MAPKAPK5-AS1Q8N8E1 139 aa13.63□□□□□ -0.23
SIN3B-211ENST00000601141 FAM104AQ969W3 186 aa13.63□□□□□ -0.23
SIN3B-211ENST00000601141 A0A087WTM6 91 aa13.62□□□□□ -0.23
SIN3B-211ENST00000601141 TRAV13-1A0A0B4J241 112 aa13.62□□□□□ -0.23
SIN3B-211ENST00000601141 EREGO14944 169 aa13.62□□□□□ -0.23
SIN3B-211ENST00000601141 SS18Q15532 418 aa13.62□□□□□ -0.23
SIN3B-211ENST00000601141 BAALCQ8WXS3 180 aa13.62□□□□□ -0.23
SIN3B-211ENST00000601141 CHCHD10Q8WYQ3 142 aaPredicted RBP13.62□□□□□ -0.23
SIN3B-211ENST00000601141 TMEM141Q96I45 108 aa13.62□□□□□ -0.23
SIN3B-211ENST00000601141 IGIPA6NJ69 53 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 LECT2O14960 151 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 PMCHL1Q16048 86 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 Q6ZN92 141 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 SCGB3A1Q96QR1 104 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 LRCOL1A6NCL2 159 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 GAGE12HA6NDE8 117 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 LINC01549A6NIU2 74 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 XCL1P47992 114 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 KRTAP26-1Q6PEX3 210 aa13.61□□□□□ -0.23
SIN3B-211ENST00000601141 CHCHD1Q96BP2 118 aaKnown RBP13.61□□□□□ -0.23
SIN3B-211ENST00000601141 IFITM10A6NMD0 228 aa13.6□□□□□ -0.23
SIN3B-211ENST00000601141 CCL25O15444 150 aa13.6□□□□□ -0.23
SIN3B-211ENST00000601141 TEX43Q6ZNM6 134 aa13.6□□□□□ -0.23
SIN3B-211ENST00000601141 TIMM17AQ99595 171 aa13.6□□□□□ -0.23
SIN3B-211ENST00000601141 A0A1B0GVY2 172 aa13.59□□□□□ -0.23
SIN3B-211ENST00000601141 C1orf196B1AJZ1 125 aa13.59□□□□□ -0.23
SIN3B-211ENST00000601141 HBDP02042 147 aa13.59□□□□□ -0.23
SIN3B-211ENST00000601141 WFDC2Q14508 124 aa13.59□□□□□ -0.23
SIN3B-211ENST00000601141 ERASQ7Z444 233 aa13.59□□□□□ -0.23
SIN3B-211ENST00000601141 A0A096LNJ9 63 aa13.58□□□□□ -0.24
SIN3B-211ENST00000601141 NPSP0C0P6 89 aa13.58□□□□□ -0.24
SIN3B-211ENST00000601141 VCX2Q9H322 139 aa13.58□□□□□ -0.24
SIN3B-211ENST00000601141 PAPPA-AS1Q5QFB9 102 aa13.57□□□□□ -0.24
SIN3B-211ENST00000601141 C2orf88Q9BSF0 95 aa13.57□□□□□ -0.24
SIN3B-211ENST00000601141 HSBP1O75506 76 aa13.56□□□□□ -0.24
SIN3B-211ENST00000601141 ZC2HC1BQ5TFG8 222 aa13.56□□□□□ -0.24
SIN3B-211ENST00000601141 HECTD4Q9Y4D8 3996 aa13.56□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BKO60814 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 SERF1AO75920 110 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BJP06899 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BOP23527 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BBP33778 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BDP58876 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BCP62807 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST2H2BEQ16778 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BHQ93079 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BNQ99877 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 HIST1H2BMQ99879 126 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 USP17L23D6RBM5 183 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 FOXI1Q12951 378 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 CD164L2Q6UWJ8 174 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 SPATA12Q7Z6I5 190 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 Q8N814 137 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 AMELXQ99217 191 aa13.55□□□□□ -0.24
SIN3B-211ENST00000601141 PKD1P98161 4303 aa13.54□□□□□ -0.24
SIN3B-211ENST00000601141 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.54□□□□□ -0.24
SIN3B-211ENST00000601141 LINC00173Q6ZV60 143 aa13.54□□□□□ -0.24
SIN3B-211ENST00000601141 DNAH11Q96DT5 4516 aa13.52□□□□□ -0.25
SIN3B-211ENST00000601141 LINC00310P59036 64 aa13.52□□□□□ -0.25
SIN3B-211ENST00000601141 KRTAP10-2P60368 255 aa13.52□□□□□ -0.25
SIN3B-211ENST00000601141 PDZD11Q5EBL8 140 aa13.52□□□□□ -0.25
SIN3B-211ENST00000601141 FAM19A2Q8N3H0 131 aa13.52□□□□□ -0.25
SIN3B-211ENST00000601141 EPPK1P58107 5090 aaKnown RBP13.52□□□□□ -0.25
SIN3B-211ENST00000601141 UBE2D1P51668 147 aa13.51□□□□□ -0.25
SIN3B-211ENST00000601141 C14orf177Q52M58 125 aa13.51□□□□□ -0.25
SIN3B-211ENST00000601141 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.5□□□□□ -0.25
SIN3B-211ENST00000601141 FUSP35637 526 aaKnown RBP eCLIP13.5□□□□□ -0.25
SIN3B-211ENST00000601141 COX7A2LO14548 114 aa13.49□□□□□ -0.25
SIN3B-211ENST00000601141 ATP5LO75964 103 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms