RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 C1orf158Q8N1D5 194 aa14.56□□□□□ -0.08
SHKBP1-225ENST00000600733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-225ENST00000600733 CCDC168Q8NDH2 2452 aa14.56□□□□□ -0.08
SHKBP1-225ENST00000600733 STHQ8IWL8 128 aa14.55□□□□□ -0.08
SHKBP1-225ENST00000600733 SPANXDQ9BXN6 97 aa14.55□□□□□ -0.08
SHKBP1-225ENST00000600733 SPANXCQ9NY87 97 aa14.55□□□□□ -0.08
SHKBP1-225ENST00000600733 TRGV1A0A0A0MS02 117 aa14.55□□□□□ -0.08
SHKBP1-225ENST00000600733 LRRC75A-AS1Q8N1F1 130 aa14.55□□□□□ -0.08
SHKBP1-225ENST00000600733 TRIAP1O43715 76 aa14.54□□□□□ -0.08
SHKBP1-225ENST00000600733 MIAQ16674 131 aa14.54□□□□□ -0.08
SHKBP1-225ENST00000600733 ZFAND6Q6FIF0 208 aa14.54□□□□□ -0.08
SHKBP1-225ENST00000600733 JMJD1CQ15652 2540 aa14.53□□□□□ -0.08
SHKBP1-225ENST00000600733 DGAT2L7PQ6IED9 249 aa14.53□□□□□ -0.08
SHKBP1-225ENST00000600733 COX6A2Q02221 97 aa14.53□□□□□ -0.08
SHKBP1-225ENST00000600733 DAND5Q8N907 189 aa14.53□□□□□ -0.08
SHKBP1-225ENST00000600733 FLNAP21333 2647 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-225ENST00000600733 DNAJC9-AS1A6NH13 148 aa14.52□□□□□ -0.08
SHKBP1-225ENST00000600733 LINC00694P0DN24 101 aa14.52□□□□□ -0.08
SHKBP1-225ENST00000600733 SETXQ7Z333 2677 aaKnown RBP14.52□□□□□ -0.08
SHKBP1-225ENST00000600733 C2CD3Q4AC94 2353 aa14.51□□□□□ -0.09
SHKBP1-225ENST00000600733 TRBV30A0A0K0K1B3 111 aa14.51□□□□□ -0.09
SHKBP1-225ENST00000600733 MT-ATP8P03928 68 aa14.51□□□□□ -0.09
SHKBP1-225ENST00000600733 XGP55808 180 aa14.51□□□□□ -0.09
SHKBP1-225ENST00000600733 ATXN8Q156A1 80 aa14.51□□□□□ -0.09
SHKBP1-225ENST00000600733 IL17DQ8TAD2 202 aa14.51□□□□□ -0.09
SHKBP1-225ENST00000600733 TMEM101Q96IK0 257 aa14.51□□□□□ -0.09
SHKBP1-225ENST00000600733 CLUHP3Q96NS8 147 aa14.51□□□□□ -0.09
SHKBP1-225ENST00000600733 NDUFA7O95182 113 aa14.5□□□□□ -0.09
SHKBP1-225ENST00000600733 Q6ZTI0 123 aa14.5□□□□□ -0.09
SHKBP1-225ENST00000600733 LINC01620Q4KN68 170 aa14.5□□□□□ -0.09
SHKBP1-225ENST00000600733 IGLV5-45A0A087WSX0 123 aa14.49□□□□□ -0.09
SHKBP1-225ENST00000600733 CCL24O00175 119 aa14.49□□□□□ -0.09
SHKBP1-225ENST00000600733 TIRAPP58753 221 aa14.49□□□□□ -0.09
SHKBP1-225ENST00000600733 TMEM86BQ8N661 226 aa14.49□□□□□ -0.09
SHKBP1-225ENST00000600733 ICOSQ9Y6W8 199 aa14.49□□□□□ -0.09
SHKBP1-225ENST00000600733 TRAV25A0A0B4J276 109 aa14.48□□□□□ -0.09
SHKBP1-225ENST00000600733 WFDC11Q8NEX6 87 aa14.48□□□□□ -0.09
SHKBP1-225ENST00000600733 ESM1Q9NQ30 184 aa14.48□□□□□ -0.09
SHKBP1-225ENST00000600733 LINC00242Q5T6M2 205 aa14.48□□□□□ -0.09
SHKBP1-225ENST00000600733 NTM-AS1Q6ZSK4 140 aa14.47□□□□□ -0.09
SHKBP1-225ENST00000600733 M0QXV9 152 aa14.46□□□□□ -0.09
SHKBP1-225ENST00000600733 NDUFA1O15239 70 aa14.46□□□□□ -0.09
SHKBP1-225ENST00000600733 K7EQD1 137 aa14.46□□□□□ -0.09
SHKBP1-225ENST00000600733 NTN5Q8WTR8 489 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-225ENST00000600733 RPL36AP83881 106 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-225ENST00000600733 RPL36ALQ969Q0 106 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-225ENST00000600733 ZNF625Q96I27 306 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-225ENST00000600733 CITED2Q99967 270 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-225ENST00000600733 TRAV13-1A0A0B4J241 112 aa14.45□□□□□ -0.1
SHKBP1-225ENST00000600733 TIMM17BO60830 172 aa14.45□□□□□ -0.1
SHKBP1-225ENST00000600733 Q9H8V8 135 aa14.45□□□□□ -0.1
SHKBP1-225ENST00000600733 HERVK_113P63121 156 aa14.44□□□□□ -0.1
SHKBP1-225ENST00000600733 NOP10Q9NPE3 64 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-225ENST00000600733 YAE1D1Q9NRH1 226 aa14.44□□□□□ -0.1
SHKBP1-225ENST00000600733 GAGE12JA6NER3 117 aa14.44□□□□□ -0.1
SHKBP1-225ENST00000600733 GAGE4Q13068 117 aa14.44□□□□□ -0.1
SHKBP1-225ENST00000600733 GAGE5Q13069 117 aa14.44□□□□□ -0.1
SHKBP1-225ENST00000600733 IGLV5-39A0A0G2JS06 123 aa14.43□□□□□ -0.1
SHKBP1-225ENST00000600733 A0A0U1RRA0 63 aa14.43□□□□□ -0.1
SHKBP1-225ENST00000600733 CLEC2BQ92478 149 aa14.43□□□□□ -0.1
SHKBP1-225ENST00000600733 WFDC10AQ9H1F0 79 aa14.43□□□□□ -0.1
SHKBP1-225ENST00000600733 TRBV10-2A0A0K0K1G8 114 aa14.43□□□□□ -0.1
SHKBP1-225ENST00000600733 RPL13AP40429 203 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-225ENST00000600733 TRBV10-1A0A0K0K1A3 114 aa14.42□□□□□ -0.1
SHKBP1-225ENST00000600733 TEX49A0A1B0GTD5 131 aa14.42□□□□□ -0.1
SHKBP1-225ENST00000600733 ACANP16112 2415 aa14.42□□□□□ -0.1
SHKBP1-225ENST00000600733 TRAV4A0A0B4J268 109 aa14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 SMIM1B2RUZ4 78 aa14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 GIG44P09565 113 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 IFITM1P13164 125 aa14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 DAZ2Q13117 558 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 DAZ4Q86SG3 579 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 RNF183Q96D59 192 aa14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 DAZ3Q9NR90 486 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 A0A1B0GV72 72 aa14.41□□□□□ -0.1
SHKBP1-225ENST00000600733 CIDEAO60543 219 aa14.4□□□□□ -0.1
SHKBP1-225ENST00000600733 CKS1BP61024 79 aa14.4□□□□□ -0.1
SHKBP1-225ENST00000600733 MTORP42345 2549 aa14.4□□□□□ -0.1
SHKBP1-225ENST00000600733 COX6CP09669 75 aa14.4□□□□□ -0.1
SHKBP1-225ENST00000600733 CIRBPQ14011 172 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-225ENST00000600733 CSDC2Q9Y534 153 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-225ENST00000600733 H7C423 109 aa14.39□□□□□ -0.11
SHKBP1-225ENST00000600733 LINC00308Q8TCZ7 52 aa14.39□□□□□ -0.11
SHKBP1-225ENST00000600733 TMEM262E9PQX1 116 aa14.39□□□□□ -0.11
SHKBP1-225ENST00000600733 CDC42SE2Q9NRR3 84 aa14.39□□□□□ -0.11
SHKBP1-225ENST00000600733 C2orf82Q6UX34 121 aa14.38□□□□□ -0.11
SHKBP1-225ENST00000600733 RPL35AP18077 110 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-225ENST00000600733 HIST2H2BCQ6DN03 193 aa14.38□□□□□ -0.11
SHKBP1-225ENST00000600733 FAM19A3Q7Z5A8 133 aa14.38□□□□□ -0.11
SHKBP1-225ENST00000600733 LINC01600Q96MT4 127 aa14.38□□□□□ -0.11
SHKBP1-225ENST00000600733 TENM4Q6N022 2769 aa14.37□□□□□ -0.11
SHKBP1-225ENST00000600733 LOC100131303A0A0U1RQF7 123 aa14.37□□□□□ -0.11
SHKBP1-225ENST00000600733 PLAC8L1A1L4L8 177 aa14.37□□□□□ -0.11
SHKBP1-225ENST00000600733 GAGE7O76087 117 aa14.36□□□□□ -0.11
SHKBP1-225ENST00000600733 GAGE12FP0CL80 117 aa14.36□□□□□ -0.11
SHKBP1-225ENST00000600733 GAGE12GP0CL81 117 aa14.36□□□□□ -0.11
SHKBP1-225ENST00000600733 GAGE12IP0CL82 117 aa14.36□□□□□ -0.11
SHKBP1-225ENST00000600733 SOSTDC1Q6X4U4 206 aa14.36□□□□□ -0.11
SHKBP1-225ENST00000600733 LINC01006Q8NI28 216 aa14.36□□□□□ -0.11
SHKBP1-225ENST00000600733 F5H768 121 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms