RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
SNRPA-208ENST00000600456 Q8N8P6 123 aa9.14□□□□□ -0.95
SNRPA-208ENST00000600456 NTN5Q8WTR8 489 aaPredicted RBP9.14□□□□□ -0.95
SNRPA-208ENST00000600456 BAALCQ8WXS3 180 aa9.14□□□□□ -0.95
SNRPA-208ENST00000600456 DYNC1H1Q14204 4646 aaKnown RBP9.13□□□□□ -0.95
SNRPA-208ENST00000600456 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
SNRPA-208ENST00000600456 LOC389332A0A1B0GUA5 103 aa9.13□□□□□ -0.95
SNRPA-208ENST00000600456 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
SNRPA-208ENST00000600456 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
SNRPA-208ENST00000600456 NXT2Q9NPJ8 142 aaKnown RBP9.13□□□□□ -0.95
SNRPA-208ENST00000600456 CDC42SE2Q9NRR3 84 aa9.13□□□□□ -0.95
SNRPA-208ENST00000600456 UBE2D4Q9Y2X8 147 aa9.13□□□□□ -0.95
SNRPA-208ENST00000600456 PKHD1P08F94 4074 aa9.13□□□□□ -0.95
SNRPA-208ENST00000600456 WFDC2Q14508 124 aa9.12□□□□□ -0.95
SNRPA-208ENST00000600456 KIAA1644Q3SXP7 199 aa9.12□□□□□ -0.95
SNRPA-208ENST00000600456 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
SNRPA-208ENST00000600456 ZNF664Q8N3J9 261 aa9.12□□□□□ -0.95
SNRPA-208ENST00000600456 SPANXA1Q9NS26 97 aa9.12□□□□□ -0.95
SNRPA-208ENST00000600456 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
SNRPA-208ENST00000600456 FABP9Q0Z7S8 132 aa9.11□□□□□ -0.95
SNRPA-208ENST00000600456 ORMDL2Q53FV1 153 aa9.11□□□□□ -0.95
SNRPA-208ENST00000600456 ALKBH7Q9BT30 221 aaPredicted RBP9.11□□□□□ -0.95
SNRPA-208ENST00000600456 SMCO4Q9NRQ5 59 aa9.11□□□□□ -0.95
SNRPA-208ENST00000600456 IGKV3OR2-268A0A0C4DH90 116 aa9.1□□□□□ -0.95
SNRPA-208ENST00000600456 LECT2O14960 151 aa9.1□□□□□ -0.95
SNRPA-208ENST00000600456 YPEL4Q96NS1 127 aa9.1□□□□□ -0.95
SNRPA-208ENST00000600456 KRTAP3-3Q9BYR6 98 aa9.1□□□□□ -0.95
SNRPA-208ENST00000600456 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
SNRPA-208ENST00000600456 IGLV5-52A0A0A0MRZ9 124 aa9.09□□□□□ -0.95
SNRPA-208ENST00000600456 CCL25O15444 150 aa9.09□□□□□ -0.95
SNRPA-208ENST00000600456 G0S2P27469 103 aa9.09□□□□□ -0.95
SNRPA-208ENST00000600456 IFI27P40305 119 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-208ENST00000600456 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
SNRPA-208ENST00000600456 CHCHD10Q8WYQ3 142 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-208ENST00000600456 TRAPPC1Q9Y5R8 145 aa9.09□□□□□ -0.95
SNRPA-208ENST00000600456 LINC00959A0A1B0GUT2 108 aa9.08□□□□□ -0.96
SNRPA-208ENST00000600456 USP17L23D6RBM5 183 aa9.08□□□□□ -0.96
SNRPA-208ENST00000600456 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
SNRPA-208ENST00000600456 SS18Q15532 418 aa9.08□□□□□ -0.96
SNRPA-208ENST00000600456 PRSS3P2Q8NHM4 247 aa9.08□□□□□ -0.96
SNRPA-208ENST00000600456 CYSLTR1Q9Y271 337 aa9.08□□□□□ -0.96
SNRPA-208ENST00000600456 PYGO1Q9Y3Y4 419 aa9.08□□□□□ -0.96
SNRPA-208ENST00000600456 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
SNRPA-208ENST00000600456 Q6ZUT4 128 aa9.07□□□□□ -0.96
SNRPA-208ENST00000600456 CBLN2Q8IUK8 224 aa9.07□□□□□ -0.96
SNRPA-208ENST00000600456 LINC01546A6NGU7 62 aa9.06□□□□□ -0.96
SNRPA-208ENST00000600456 C1orf196B1AJZ1 125 aa9.06□□□□□ -0.96
SNRPA-208ENST00000600456 NPSP0C0P6 89 aa9.06□□□□□ -0.96
SNRPA-208ENST00000600456 GCSHP23434 173 aa9.06□□□□□ -0.96
SNRPA-208ENST00000600456 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
SNRPA-208ENST00000600456 FUSP35637 526 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNRPA-208ENST00000600456 XCL1P47992 114 aa9.05□□□□□ -0.96
SNRPA-208ENST00000600456 FOXI1Q12951 378 aa9.05□□□□□ -0.96
SNRPA-208ENST00000600456 CFAP161Q6P656 301 aa9.05□□□□□ -0.96
SNRPA-208ENST00000600456 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.04□□□□□ -0.96
SNRPA-208ENST00000600456 LINC01549A6NIU2 74 aa9.04□□□□□ -0.96
SNRPA-208ENST00000600456 CDK2AP2O75956 126 aa9.04□□□□□ -0.96
SNRPA-208ENST00000600456 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
SNRPA-208ENST00000600456 CD164L2Q6UWJ8 174 aa9.04□□□□□ -0.96
SNRPA-208ENST00000600456 FAM104AQ969W3 186 aa9.04□□□□□ -0.96
SNRPA-208ENST00000600456 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
SNRPA-208ENST00000600456 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
SNRPA-208ENST00000600456 IGLV4-3A0A075B6K6 122 aa9.03□□□□□ -0.96
SNRPA-208ENST00000600456 TRAV13-1A0A0B4J241 112 aa9.03□□□□□ -0.96
SNRPA-208ENST00000600456 PRSS1P07477 247 aa9.03□□□□□ -0.96
SNRPA-208ENST00000600456 FA2HQ7L5A8 372 aa9.03□□□□□ -0.96
SNRPA-208ENST00000600456 KIAA1109Q2LD37 5005 aa9.03□□□□□ -0.96
SNRPA-208ENST00000600456 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
SNRPA-208ENST00000600456 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
SNRPA-208ENST00000600456 PAPPA-AS1Q5QFB9 102 aa9.02□□□□□ -0.97
SNRPA-208ENST00000600456 Q6ZN92 141 aa9.02□□□□□ -0.97
SNRPA-208ENST00000600456 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.97
SNRPA-208ENST00000600456 TOMM6Q96B49 74 aa9.02□□□□□ -0.97
SNRPA-208ENST00000600456 TMEM141Q96I45 108 aa9.02□□□□□ -0.97
SNRPA-208ENST00000600456 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
SNRPA-208ENST00000600456 hDV102S1A0JD36 115 aa9.01□□□□□ -0.97
SNRPA-208ENST00000600456 IGIPA6NJ69 53 aa9.01□□□□□ -0.97
SNRPA-208ENST00000600456 C15orf56Q8N910 161 aa9.01□□□□□ -0.97
SNRPA-208ENST00000600456 TIMM17AQ99595 171 aa9.01□□□□□ -0.97
SNRPA-208ENST00000600456 AP5S1Q9NUS5 200 aa9.01□□□□□ -0.97
SNRPA-208ENST00000600456 GVQW2A0A096LPI5 108 aaPredicted RBP9□□□□□ -0.97
SNRPA-208ENST00000600456 IGHV1-58A0A0C4DH39 117 aa9□□□□□ -0.97
SNRPA-208ENST00000600456 COX7A2LO14548 114 aa9□□□□□ -0.97
SNRPA-208ENST00000600456 RAB5BP61020 215 aa9□□□□□ -0.97
SNRPA-208ENST00000600456 CNBPP62633 177 aaKnown RBP9□□□□□ -0.97
SNRPA-208ENST00000600456 TEX43Q6ZNM6 134 aa9□□□□□ -0.97
SNRPA-208ENST00000600456 ERASQ7Z444 233 aa9□□□□□ -0.97
SNRPA-208ENST00000600456 C2orf88Q9BSF0 95 aa9□□□□□ -0.97
SNRPA-208ENST00000600456 LINC00614P0C842 121 aa8.99□□□□□ -0.97
SNRPA-208ENST00000600456 VCX2Q9H322 139 aa8.99□□□□□ -0.97
SNRPA-208ENST00000600456 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
SNRPA-208ENST00000600456 MALP21145 153 aa8.98□□□□□ -0.97
SNRPA-208ENST00000600456 SCGB3A1Q96QR1 104 aa8.98□□□□□ -0.97
SNRPA-208ENST00000600456 AMELXQ99217 191 aa8.98□□□□□ -0.97
SNRPA-208ENST00000600456 COLCA2A8K830 154 aa8.97□□□□□ -0.97
SNRPA-208ENST00000600456 C9orf163Q8N9P6 203 aa8.97□□□□□ -0.97
SNRPA-208ENST00000600456 URB1-AS1Q96HZ7 61 aa8.97□□□□□ -0.97
SNRPA-208ENST00000600456 HERC2O95714 4834 aa8.96□□□□□ -0.97
SNRPA-208ENST00000600456 IGHV3OR16-9A0A0B4J2B5 98 aa8.96□□□□□ -0.98
SNRPA-208ENST00000600456 APOMO95445 188 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms