RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 PPDPFQ9H3Y8 114 aa13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 DAZ3Q9NR90 486 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 B4DSR2 109 aa13.43□□□□□ -0.26
ARHGEF1-221ENST00000600387 SOSTDC1Q6X4U4 206 aa13.43□□□□□ -0.26
ARHGEF1-221ENST00000600387 ZNF625Q96I27 306 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF1-221ENST00000600387 UBE2E2Q96LR5 201 aa13.43□□□□□ -0.26
ARHGEF1-221ENST00000600387 SMCR5Q8TEV8 140 aa13.43□□□□□ -0.26
ARHGEF1-221ENST00000600387 SMIM1B2RUZ4 78 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 ATP5G1P05496 136 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 BAALC-AS2P0C853 105 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 ATP5J2P56134 94 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 LY6DQ14210 128 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 DEFB112Q30KQ8 113 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 Q8N2B8 174 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 PEMTQ9UBM1 199 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 A0A0U1RRA0 63 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 FAM222AQ5U5X8 452 aa13.42□□□□□ -0.26
ARHGEF1-221ENST00000600387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.41□□□□□ -0.266e-7■■□□□ 13.8
ARHGEF1-221ENST00000600387 PRIMA1Q86XR5 153 aa13.41□□□□□ -0.26
ARHGEF1-221ENST00000600387 CXCL5P42830 114 aa13.41□□□□□ -0.26
ARHGEF1-221ENST00000600387 CSDC2Q9Y534 153 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-221ENST00000600387 INAFM2P0DMQ5 153 aa13.4□□□□□ -0.26
ARHGEF1-221ENST00000600387 C3orf22Q8N5N4 141 aa13.39□□□□□ -0.27
ARHGEF1-221ENST00000600387 PF4P02776 101 aa13.38□□□□□ -0.27
ARHGEF1-221ENST00000600387 IGF2RP11717 2491 aa13.38□□□□□ -0.27
ARHGEF1-221ENST00000600387 VPS13CQ709C8 3753 aa13.38□□□□□ -0.27
ARHGEF1-221ENST00000600387 UQCRQO14949 82 aa13.37□□□□□ -0.27
ARHGEF1-221ENST00000600387 INSP01308 110 aa13.37□□□□□ -0.27
ARHGEF1-221ENST00000600387 HIST2H2BCQ6DN03 193 aa13.37□□□□□ -0.27
ARHGEF1-221ENST00000600387 HIST2H2BDQ6DRA6 164 aa13.37□□□□□ -0.27
ARHGEF1-221ENST00000600387 C22orf24Q9Y442 160 aa13.37□□□□□ -0.27
ARHGEF1-221ENST00000600387 C9orf153Q5TBE3 101 aa13.36□□□□□ -0.27
ARHGEF1-221ENST00000600387 C5orf38Q86SI9 138 aa13.36□□□□□ -0.27
ARHGEF1-221ENST00000600387 TRAV13-2A0A0B4J235 113 aa13.36□□□□□ -0.27
ARHGEF1-221ENST00000600387 TRAV13-1A0A0B4J241 112 aa13.36□□□□□ -0.27
ARHGEF1-221ENST00000600387 LINC00694P0DN24 101 aa13.36□□□□□ -0.27
ARHGEF1-221ENST00000600387 FAM218AQ96MZ4 157 aa13.36□□□□□ -0.27
ARHGEF1-221ENST00000600387 F5H768 121 aa13.35□□□□□ -0.27
ARHGEF1-221ENST00000600387 SLURP1P55000 103 aa13.35□□□□□ -0.27
ARHGEF1-221ENST00000600387 C3orf56Q8N813 242 aa13.35□□□□□ -0.27
ARHGEF1-221ENST00000600387 RPL28P46779 137 aaKnown RBP13.34□□□□□ -0.27
ARHGEF1-221ENST00000600387 MAP6D1Q9H9H5 199 aa13.34□□□□□ -0.27
ARHGEF1-221ENST00000600387 CSPG4Q6UVK1 2322 aa13.34□□□□□ -0.27
ARHGEF1-221ENST00000600387 NDUFA7O95182 113 aa13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 GNLYP22749 145 aa13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 RPL36AP83881 106 aaKnown RBP13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 RPL36ALQ969Q0 106 aaKnown RBP13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 LINC00526Q96FQ7 95 aa13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 OVOL2Q9BRP0 275 aa13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 VPREB3Q9UKI3 123 aa13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 MALP21145 153 aa13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 ZNF702PQ9H963 129 aa13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 CDC42SE2Q9NRR3 84 aa13.33□□□□□ -0.28
ARHGEF1-221ENST00000600387 TRBV10-1A0A0K0K1A3 114 aa13.32□□□□□ -0.28
ARHGEF1-221ENST00000600387 CFAP161Q6P656 301 aa13.32□□□□□ -0.28
ARHGEF1-221ENST00000600387 GAGE2AQ6NT46 116 aa13.32□□□□□ -0.28
ARHGEF1-221ENST00000600387 COL12A1Q99715 3063 aa13.31□□□□□ -0.28
ARHGEF1-221ENST00000600387 CRPP02741 224 aa13.31□□□□□ -0.28
ARHGEF1-221ENST00000600387 K7EQD1 137 aa13.3□□□□□ -0.28
ARHGEF1-221ENST00000600387 DEFB136Q30KP8 78 aa13.3□□□□□ -0.28
ARHGEF1-221ENST00000600387 NTM-AS1Q6ZSK4 140 aa13.3□□□□□ -0.28
ARHGEF1-221ENST00000600387 DSCR9P59020 149 aa13.29□□□□□ -0.28
ARHGEF1-221ENST00000600387 LINC01356Q8N9X3 169 aa13.29□□□□□ -0.28
ARHGEF1-221ENST00000600387 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
ARHGEF1-221ENST00000600387 J3QLI3 93 aa13.28□□□□□ -0.28
ARHGEF1-221ENST00000600387 COX7CP15954 63 aa13.28□□□□□ -0.28
ARHGEF1-221ENST00000600387 IL17DQ8TAD2 202 aa13.28□□□□□ -0.28
ARHGEF1-221ENST00000600387 DYNLRB2Q8TF09 96 aa13.28□□□□□ -0.28
ARHGEF1-221ENST00000600387 Q9HAA7 133 aa13.28□□□□□ -0.28
ARHGEF1-221ENST00000600387 TRGV1A0A0A0MS02 117 aa13.28□□□□□ -0.28
ARHGEF1-221ENST00000600387 DNAL4O96015 105 aa13.27□□□□□ -0.28
ARHGEF1-221ENST00000600387 C18orf65Q6ZTR6 163 aa13.27□□□□□ -0.28
ARHGEF1-221ENST00000600387 HIST1H4AP62805 103 aaKnown RBP13.27□□□□□ -0.29
ARHGEF1-221ENST00000600387 ATOX1O00244 68 aa13.26□□□□□ -0.29
ARHGEF1-221ENST00000600387 Q96MF0 132 aa13.26□□□□□ -0.29
ARHGEF1-221ENST00000600387 XCL2Q9UBD3 114 aa13.26□□□□□ -0.29
ARHGEF1-221ENST00000600387 CREBBPQ92793 2442 aa13.26□□□□□ -0.29
ARHGEF1-221ENST00000600387 UBE2L6O14933 153 aa13.25□□□□□ -0.29
ARHGEF1-221ENST00000600387 Q6YL49 198 aa13.25□□□□□ -0.29
ARHGEF1-221ENST00000600387 LINC00337Q8N6G1 96 aa13.25□□□□□ -0.29
ARHGEF1-221ENST00000600387 SND1-IT1Q9HBX3 110 aa13.25□□□□□ -0.29
ARHGEF1-221ENST00000600387 H0YGX0 51 aa13.24□□□□□ -0.29
ARHGEF1-221ENST00000600387 MIR7-3HGQ8N6C7 128 aa13.24□□□□□ -0.29
ARHGEF1-221ENST00000600387 COX7B2Q8TF08 81 aa13.24□□□□□ -0.29
ARHGEF1-221ENST00000600387 IGKV2-28A0A075B6P5 120 aa13.24□□□□□ -0.29
ARHGEF1-221ENST00000600387 IGKV2D-28P01615 120 aa13.24□□□□□ -0.29
ARHGEF1-221ENST00000600387 DEFB114Q30KQ6 69 aa13.24□□□□□ -0.29
ARHGEF1-221ENST00000600387 C2orf48Q96LS8 159 aa13.23□□□□□ -0.29
ARHGEF1-221ENST00000600387 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
ARHGEF1-221ENST00000600387 CRYGAP11844 174 aa13.23□□□□□ -0.29
ARHGEF1-221ENST00000600387 C1orf158Q8N1D5 194 aa13.23□□□□□ -0.29
ARHGEF1-221ENST00000600387 C4orf3Q8WVX3 66 aa13.23□□□□□ -0.29
ARHGEF1-221ENST00000600387 SMIM11BQ8TCY0 68 aa13.22□□□□□ -0.29
ARHGEF1-221ENST00000600387 A0A087WYN8 130 aa13.21□□□□□ -0.29
ARHGEF1-221ENST00000600387 STHQ8IWL8 128 aa13.21□□□□□ -0.29
ARHGEF1-221ENST00000600387 OBSCN-AS1Q96MR7 158 aa13.21□□□□□ -0.29
ARHGEF1-221ENST00000600387 Q6ZTI0 123 aa13.2□□□□□ -0.3
ARHGEF1-221ENST00000600387 NRGNQ92686 78 aa13.2□□□□□ -0.3
ARHGEF1-221ENST00000600387 A0A1B0GX51 115 aa13.19□□□□□ -0.3
ARHGEF1-221ENST00000600387 Q6JHZ5 121 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms