RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
TGFB1-204ENST00000600196 HSBP1O75506 76 aa8.3□□□□□ -1.08
TGFB1-204ENST00000600196 ATP5LO75964 103 aa8.3□□□□□ -1.08
TGFB1-204ENST00000600196 ANGP03950 147 aaKnown RBP8.3□□□□□ -1.08
TGFB1-204ENST00000600196 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
TGFB1-204ENST00000600196 TM2D2Q9BX73 214 aa8.3□□□□□ -1.08
TGFB1-204ENST00000600196 IGHV3-30P01768 117 aa8.29□□□□□ -1.08
TGFB1-204ENST00000600196 IGHV3-33P01772 117 aa8.29□□□□□ -1.08
TGFB1-204ENST00000600196 CRPP02741 224 aa8.29□□□□□ -1.08
TGFB1-204ENST00000600196 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
TGFB1-204ENST00000600196 IGHV3-30-5P0DP03 117 aa8.29□□□□□ -1.08
TGFB1-204ENST00000600196 Q6ZN92 141 aa8.29□□□□□ -1.08
TGFB1-204ENST00000600196 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
TGFB1-204ENST00000600196 IGLV4-60A0A075B6I1 120 aa8.28□□□□□ -1.08
TGFB1-204ENST00000600196 REG3AQ06141 175 aa8.28□□□□□ -1.08
TGFB1-204ENST00000600196 PDZD11Q5EBL8 140 aa8.28□□□□□ -1.08
TGFB1-204ENST00000600196 Q8N976 141 aa8.28□□□□□ -1.08
TGFB1-204ENST00000600196 SCGB3A1Q96QR1 104 aa8.28□□□□□ -1.08
TGFB1-204ENST00000600196 KLK12Q9UKR0 248 aa8.28□□□□□ -1.08
TGFB1-204ENST00000600196 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.27□□□□□ -1.09
TGFB1-204ENST00000600196 SERF1AO75920 110 aa8.27□□□□□ -1.09
TGFB1-204ENST00000600196 RPL39P62891 51 aaKnown RBP8.27□□□□□ -1.09
TGFB1-204ENST00000600196 SEC11AP67812 179 aa8.27□□□□□ -1.09
TGFB1-204ENST00000600196 C1orf134Q5TEV5 83 aa8.27□□□□□ -1.09
TGFB1-204ENST00000600196 ENHOQ6UWT2 76 aa8.27□□□□□ -1.09
TGFB1-204ENST00000600196 LINC00269Q8N2A0 174 aa8.27□□□□□ -1.09
TGFB1-204ENST00000600196 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
TGFB1-204ENST00000600196 AMELXQ99217 191 aa8.27□□□□□ -1.09
TGFB1-204ENST00000600196 VCX2Q9H322 139 aa8.27□□□□□ -1.09
TGFB1-204ENST00000600196 A0A096LNJ9 63 aa8.26□□□□□ -1.09
TGFB1-204ENST00000600196 SS18Q15532 418 aa8.26□□□□□ -1.09
TGFB1-204ENST00000600196 TEX43Q6ZNM6 134 aa8.26□□□□□ -1.09
TGFB1-204ENST00000600196 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
TGFB1-204ENST00000600196 DEFB104AQ8WTQ1 72 aa8.26□□□□□ -1.09
TGFB1-204ENST00000600196 C2orf88Q9BSF0 95 aa8.26□□□□□ -1.09
TGFB1-204ENST00000600196 IGLV4-3A0A075B6K6 122 aa8.25□□□□□ -1.09
TGFB1-204ENST00000600196 FAM104AQ969W3 186 aa8.25□□□□□ -1.09
TGFB1-204ENST00000600196 UBE2WQ96B02 151 aa8.25□□□□□ -1.09
TGFB1-204ENST00000600196 C1orf43Q9BWL3 253 aa8.25□□□□□ -1.09
TGFB1-204ENST00000600196 HSPB8Q9UJY1 196 aa8.25□□□□□ -1.09
TGFB1-204ENST00000600196 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
TGFB1-204ENST00000600196 LINC00310P59036 64 aa8.24□□□□□ -1.09
TGFB1-204ENST00000600196 LINC00336Q6ZUF6 198 aa8.24□□□□□ -1.09
TGFB1-204ENST00000600196 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
TGFB1-204ENST00000600196 DNAH6Q9C0G6 4158 aa8.24□□□□□ -1.09
TGFB1-204ENST00000600196 SACSQ9NZJ4 4579 aa8.24□□□□□ -1.09
TGFB1-204ENST00000600196 LEPROTL1O95214 131 aa8.23□□□□□ -1.09
TGFB1-204ENST00000600196 S100A6P06703 90 aa8.23□□□□□ -1.09
TGFB1-204ENST00000600196 NDUFA6P56556 154 aa8.23□□□□□ -1.09
TGFB1-204ENST00000600196 PMVKQ15126 192 aa8.23□□□□□ -1.09
TGFB1-204ENST00000600196 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
TGFB1-204ENST00000600196 CD164L2Q6UWJ8 174 aa8.22□□□□□ -1.09
TGFB1-204ENST00000600196 Q6ZRN7 208 aaPredicted RBP8.22□□□□□ -1.09
TGFB1-204ENST00000600196 Q6ZUT4 128 aa8.22□□□□□ -1.09
TGFB1-204ENST00000600196 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
TGFB1-204ENST00000600196 Q8N3U1 123 aa8.22□□□□□ -1.09
TGFB1-204ENST00000600196 IFI27L1Q96BM0 104 aa8.22□□□□□ -1.09
TGFB1-204ENST00000600196 IFITM10A6NMD0 228 aa8.21□□□□□ -1.1
TGFB1-204ENST00000600196 M0R2N4 97 aa8.21□□□□□ -1.1
TGFB1-204ENST00000600196 AKR1D1P51857 326 aa8.21□□□□□ -1.1
TGFB1-204ENST00000600196 SPATA12Q7Z6I5 190 aa8.21□□□□□ -1.1
TGFB1-204ENST00000600196 CST9LQ9H4G1 147 aa8.21□□□□□ -1.1
TGFB1-204ENST00000600196 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.1
TGFB1-204ENST00000600196 NUPR1O60356 82 aa8.2□□□□□ -1.1
TGFB1-204ENST00000600196 UBE2D1P51668 147 aa8.2□□□□□ -1.1
TGFB1-204ENST00000600196 HERVK_113P63121 156 aa8.2□□□□□ -1.1
TGFB1-204ENST00000600196 CFAP161Q6P656 301 aa8.2□□□□□ -1.1
TGFB1-204ENST00000600196 KRTAP26-1Q6PEX3 210 aa8.2□□□□□ -1.1
TGFB1-204ENST00000600196 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
TGFB1-204ENST00000600196 BAALCQ8WXS3 180 aa8.2□□□□□ -1.1
TGFB1-204ENST00000600196 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
TGFB1-204ENST00000600196 RYR2Q92736 4967 aa8.2□□□□□ -1.1
TGFB1-204ENST00000600196 IGKV2D-24A0A075B6R9 120 aa8.19□□□□□ -1.1
TGFB1-204ENST00000600196 PSCAO43653 123 aa8.19□□□□□ -1.1
TGFB1-204ENST00000600196 PRSS1P07477 247 aa8.19□□□□□ -1.1
TGFB1-204ENST00000600196 C14orf177Q52M58 125 aa8.19□□□□□ -1.1
TGFB1-204ENST00000600196 FAM19A2Q8N3H0 131 aa8.19□□□□□ -1.1
TGFB1-204ENST00000600196 LYSTQ99698 3801 aa8.19□□□□□ -1.1
TGFB1-204ENST00000600196 TRAV13-1A0A0B4J241 112 aa8.18□□□□□ -1.1
TGFB1-204ENST00000600196 IGHV3OR16-9A0A0B4J2B5 98 aa8.18□□□□□ -1.1
TGFB1-204ENST00000600196 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
TGFB1-204ENST00000600196 PMCHL1Q16048 86 aa8.18□□□□□ -1.1
TGFB1-204ENST00000600196 LINC00242Q5T6M2 205 aa8.18□□□□□ -1.1
TGFB1-204ENST00000600196 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
TGFB1-204ENST00000600196 MAP1LC3CQ9BXW4 147 aa8.18□□□□□ -1.1
TGFB1-204ENST00000600196 Q9HAA7 133 aa8.18□□□□□ -1.1
TGFB1-204ENST00000600196 C5orf52A6NGY3 159 aa8.17□□□□□ -1.1
TGFB1-204ENST00000600196 PRSS29PA6NIE9 313 aa8.17□□□□□ -1.1
TGFB1-204ENST00000600196 F8WDY8 70 aa8.17□□□□□ -1.1
TGFB1-204ENST00000600196 EREGO14944 169 aa8.17□□□□□ -1.1
TGFB1-204ENST00000600196 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
TGFB1-204ENST00000600196 RTL8CO15255 209 aa8.16□□□□□ -1.1
TGFB1-204ENST00000600196 APOMO95445 188 aa8.16□□□□□ -1.1
TGFB1-204ENST00000600196 IGLC3P0DOY3 106 aa8.16□□□□□ -1.1
TGFB1-204ENST00000600196 S100A2P29034 98 aa8.16□□□□□ -1.1
TGFB1-204ENST00000600196 FOXI1Q12951 378 aa8.16□□□□□ -1.1
TGFB1-204ENST00000600196 PET117Q6UWS5 81 aa8.16□□□□□ -1.1
TGFB1-204ENST00000600196 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.1
TGFB1-204ENST00000600196 A0A087WZ39 114 aa8.15□□□□□ -1.1
TGFB1-204ENST00000600196 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms