RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 PAM16Q9Y3D7 125 aa13.78□□□□□ -0.2
IRF3-221ENST00000598808 UBE2D3P61077 147 aa13.77□□□□□ -0.21
IRF3-221ENST00000598808 UBE2D2P62837 147 aa13.77□□□□□ -0.21
IRF3-221ENST00000598808 SPATA45Q537H7 98 aa13.77□□□□□ -0.21
IRF3-221ENST00000598808 FRAS1Q86XX4 4008 aa13.77□□□□□ -0.21
IRF3-221ENST00000598808 DNAH10Q8IVF4 4471 aa13.76□□□□□ -0.21
IRF3-221ENST00000598808 TIRAPP58753 221 aa13.76□□□□□ -0.21
IRF3-221ENST00000598808 TTC32Q5I0X7 151 aa13.76□□□□□ -0.21
IRF3-221ENST00000598808 LELP1Q5T871 98 aa13.76□□□□□ -0.21
IRF3-221ENST00000598808 C2orf66Q6UXQ4 117 aa13.76□□□□□ -0.21
IRF3-221ENST00000598808 ERASQ7Z444 233 aa13.76□□□□□ -0.21
IRF3-221ENST00000598808 SCGB3A1Q96QR1 104 aa13.75□□□□□ -0.21
IRF3-221ENST00000598808 TRAV12-1A0A0B4J245 112 aa13.74□□□□□ -0.21
IRF3-221ENST00000598808 PRSS1P07477 247 aa13.74□□□□□ -0.21
IRF3-221ENST00000598808 TMEM141Q96I45 108 aa13.74□□□□□ -0.21
IRF3-221ENST00000598808 Q6ZN92 141 aa13.74□□□□□ -0.21
IRF3-221ENST00000598808 MIEN1Q9BRT3 115 aa13.74□□□□□ -0.21
IRF3-221ENST00000598808 H0Y8G0 127 aa13.73□□□□□ -0.21
IRF3-221ENST00000598808 TIMM17AQ99595 171 aa13.73□□□□□ -0.21
IRF3-221ENST00000598808 DAZ4Q86SG3 579 aaKnown RBP13.72□□□□□ -0.21
IRF3-221ENST00000598808 ATOH7Q8N100 152 aa13.72□□□□□ -0.21
IRF3-221ENST00000598808 DAZ3Q9NR90 486 aaKnown RBP13.72□□□□□ -0.21
IRF3-221ENST00000598808 LINC00587B1AMM8 73 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 TSHBP01222 138 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 IGHV3-30P01768 117 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 IGHV3-33P01772 117 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 NPSP0C0P6 89 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 IGHV3-30-3P0DP02 117 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 IGHV3-30-5P0DP03 117 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 ODF1Q14990 250 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 Q6ZR54 194 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 UQCR10Q9UDW1 63 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 BIRC6Q9NR09 4857 aa13.71□□□□□ -0.21
IRF3-221ENST00000598808 A0A087WX48 190 aa13.7□□□□□ -0.22
IRF3-221ENST00000598808 C1orf134Q5TEV5 83 aa13.7□□□□□ -0.22
IRF3-221ENST00000598808 DEFB104AQ8WTQ1 72 aa13.7□□□□□ -0.22
IRF3-221ENST00000598808 IGLC3P0DOY3 106 aa13.69□□□□□ -0.22
IRF3-221ENST00000598808 MRPL52Q86TS9 123 aaKnown RBP13.69□□□□□ -0.22
IRF3-221ENST00000598808 KRTAP1-5Q9BYS1 174 aa13.69□□□□□ -0.22
IRF3-221ENST00000598808 DPM2O94777 84 aa13.68□□□□□ -0.22
IRF3-221ENST00000598808 PLNP26678 52 aa13.68□□□□□ -0.22
IRF3-221ENST00000598808 C20orf203Q8NBC4 194 aa13.68□□□□□ -0.22
IRF3-221ENST00000598808 IGIPA6NJ69 53 aa13.67□□□□□ -0.22
IRF3-221ENST00000598808 DNAH10OSP0CZ25 163 aa13.67□□□□□ -0.22
IRF3-221ENST00000598808 TMEM97Q5BJF2 176 aa13.67□□□□□ -0.22
IRF3-221ENST00000598808 PAPPA-AS1Q5QFB9 102 aa13.67□□□□□ -0.22
IRF3-221ENST00000598808 CHCHD5Q9BSY4 110 aa13.67□□□□□ -0.22
IRF3-221ENST00000598808 TRBV6-8A0A0A6YYG3 113 aa13.67□□□□□ -0.22
IRF3-221ENST00000598808 TMEM262E9PQX1 116 aa13.67□□□□□ -0.22
IRF3-221ENST00000598808 C6orf223Q8N319 242 aa13.67□□□□□ -0.22
IRF3-221ENST00000598808 F8VRH5 84 aa13.66□□□□□ -0.22
IRF3-221ENST00000598808 IGKCP01834 107 aa13.66□□□□□ -0.22
IRF3-221ENST00000598808 COTL1Q14019 142 aa13.66□□□□□ -0.22
IRF3-221ENST00000598808 LINC01556Q5JQF7 62 aa13.66□□□□□ -0.22
IRF3-221ENST00000598808 PYGO1Q9Y3Y4 419 aa13.66□□□□□ -0.22
IRF3-221ENST00000598808 TRBV25-1A0A075B6N4 114 aa13.65□□□□□ -0.22
IRF3-221ENST00000598808 Q8N3U1 123 aa13.65□□□□□ -0.22
IRF3-221ENST00000598808 C10orf126Q8N4M7 172 aa13.65□□□□□ -0.22
IRF3-221ENST00000598808 BAALCQ8WXS3 180 aa13.65□□□□□ -0.22
IRF3-221ENST00000598808 PMCHL2Q9BQD1 86 aa13.65□□□□□ -0.22
IRF3-221ENST00000598808 hDV102S1A0JD36 115 aa13.64□□□□□ -0.23
IRF3-221ENST00000598808 MAJINQ3KP22 176 aa13.64□□□□□ -0.23
IRF3-221ENST00000598808 SMAGPQ0VAQ4 97 aa13.63□□□□□ -0.23
IRF3-221ENST00000598808 PMVKQ15126 192 aa13.63□□□□□ -0.23
IRF3-221ENST00000598808 CHTOPQ9Y3Y2 248 aaKnown RBP13.63□□□□□ -0.23
IRF3-221ENST00000598808 DNAH2Q9P225 4427 aa13.63□□□□□ -0.23
IRF3-221ENST00000598808 GAGE6Q13070 117 aa13.62□□□□□ -0.23
IRF3-221ENST00000598808 NTM-AS1Q6ZSK4 140 aa13.62□□□□□ -0.23
IRF3-221ENST00000598808 SPANXA1Q9NS26 97 aa13.62□□□□□ -0.23
IRF3-221ENST00000598808 RTL8CO15255 209 aa13.61□□□□□ -0.23
IRF3-221ENST00000598808 Q9HAA7 133 aa13.61□□□□□ -0.23
IRF3-221ENST00000598808 MRPL35Q9NZE8 188 aaKnown RBP13.61□□□□□ -0.23
IRF3-221ENST00000598808 K7EP13 123 aa13.61□□□□□ -0.23
IRF3-221ENST00000598808 UBE2L6O14933 153 aa13.61□□□□□ -0.23
IRF3-221ENST00000598808 RPL39P62891 51 aaKnown RBP13.61□□□□□ -0.23
IRF3-221ENST00000598808 SLC25A34Q6PIV7 304 aa13.61□□□□□ -0.23
IRF3-221ENST00000598808 TMEM243Q9BU79 118 aa13.61□□□□□ -0.23
IRF3-221ENST00000598808 PRSS29PA6NIE9 313 aa13.6□□□□□ -0.23
IRF3-221ENST00000598808 LBHQ53QV2 105 aaPredicted RBP13.6□□□□□ -0.23
IRF3-221ENST00000598808 C14orf144Q96I85 54 aa13.6□□□□□ -0.23
IRF3-221ENST00000598808 TIMM21Q9BVV7 248 aa13.6□□□□□ -0.23
IRF3-221ENST00000598808 HECTD4Q9Y4D8 3996 aa13.59□□□□□ -0.23
IRF3-221ENST00000598808 COX8AP10176 69 aa13.59□□□□□ -0.23
IRF3-221ENST00000598808 HNRNPA3P51991 378 aaKnown RBP13.59□□□□□ -0.23
IRF3-221ENST00000598808 CST9LQ9H4G1 147 aa13.59□□□□□ -0.23
IRF3-221ENST00000598808 DLEU1O43261 78 aa13.58□□□□□ -0.24
IRF3-221ENST00000598808 LINC00336Q6ZUF6 198 aa13.58□□□□□ -0.24
IRF3-221ENST00000598808 CHCHD7Q9BUK0 85 aa13.58□□□□□ -0.24
IRF3-221ENST00000598808 FAT2Q9NYQ8 4349 aa13.58□□□□□ -0.24
IRF3-221ENST00000598808 MPV17L2Q567V2 206 aa13.57□□□□□ -0.24
IRF3-221ENST00000598808 NFE4Q86UQ8 179 aa13.57□□□□□ -0.24
IRF3-221ENST00000598808 KLK12Q9UKR0 248 aa13.57□□□□□ -0.24
IRF3-221ENST00000598808 DNAH17Q9UFH2 4485 aa13.57□□□□□ -0.24
IRF3-221ENST00000598808 IBA57-AS1B1ANH7 110 aa13.55□□□□□ -0.24
IRF3-221ENST00000598808 H7C423 109 aa13.55□□□□□ -0.24
IRF3-221ENST00000598808 ANGP03950 147 aaKnown RBP13.55□□□□□ -0.24
IRF3-221ENST00000598808 ANKRD39Q53RE8 183 aa13.55□□□□□ -0.24
IRF3-221ENST00000598808 VCX2Q9H322 139 aa13.55□□□□□ -0.24
IRF3-221ENST00000598808 M0R143 59 aa13.55□□□□□ -0.24
IRF3-221ENST00000598808 CRPP02741 224 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms