RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 RAB5BP61020 215 aa14.8□□□□□ -0.04
CHMP2A-204ENST00000597848 Q6ZRN7 208 aaPredicted RBP14.8□□□□□ -0.04
CHMP2A-204ENST00000597848 ZNF664Q8N3J9 261 aa14.8□□□□□ -0.04
CHMP2A-204ENST00000597848 CDC42SE2Q9NRR3 84 aa14.8□□□□□ -0.04
CHMP2A-204ENST00000597848 SPANXA1Q9NS26 97 aa14.8□□□□□ -0.04
CHMP2A-204ENST00000597848 CSDC2Q9Y534 153 aaKnown RBP14.8□□□□□ -0.04
CHMP2A-204ENST00000597848 LINC01546A6NGU7 62 aa14.79□□□□□ -0.04
CHMP2A-204ENST00000597848 LINC00336Q6ZUF6 198 aa14.79□□□□□ -0.04
CHMP2A-204ENST00000597848 C1orf43Q9BWL3 253 aa14.79□□□□□ -0.04
CHMP2A-204ENST00000597848 AP5S1Q9NUS5 200 aa14.79□□□□□ -0.04
CHMP2A-204ENST00000597848 COX11Q9Y6N1 276 aa14.78□□□□□ -0.04
CHMP2A-204ENST00000597848 PRSS29PA6NIE9 313 aa14.77□□□□□ -0.05
CHMP2A-204ENST00000597848 RNASE13Q5GAN3 156 aaKnown RBP14.77□□□□□ -0.05
CHMP2A-204ENST00000597848 BAGE3Q86Y29 109 aa14.77□□□□□ -0.05
CHMP2A-204ENST00000597848 IGLV10-54A0A075B6I4 117 aa14.76□□□□□ -0.05
CHMP2A-204ENST00000597848 Q6ZUT4 128 aa14.76□□□□□ -0.05
CHMP2A-204ENST00000597848 URB1-AS1Q96HZ7 61 aa14.76□□□□□ -0.05
CHMP2A-204ENST00000597848 OPRPNQ99935 248 aaPredicted RBP14.76□□□□□ -0.05
CHMP2A-204ENST00000597848 TRAV8-4A0A0B4J246 113 aa14.75□□□□□ -0.05
CHMP2A-204ENST00000597848 TNP2Q05952 138 aa14.75□□□□□ -0.05
CHMP2A-204ENST00000597848 PYGO1Q9Y3Y4 419 aa14.75□□□□□ -0.05
CHMP2A-204ENST00000597848 TOMM6Q96B49 74 aa14.74□□□□□ -0.05
CHMP2A-204ENST00000597848 MRPS36P82909 103 aaKnown RBP14.73□□□□□ -0.05
CHMP2A-204ENST00000597848 SCGB3A1Q96QR1 104 aa14.72□□□□□ -0.05
CHMP2A-204ENST00000597848 IGLV4-3A0A075B6K6 122 aa14.71□□□□□ -0.05
CHMP2A-204ENST00000597848 LINC00959A0A1B0GUT2 108 aa14.71□□□□□ -0.05
CHMP2A-204ENST00000597848 LINC01549A6NIU2 74 aa14.71□□□□□ -0.05
CHMP2A-204ENST00000597848 SS18Q15532 418 aa14.71□□□□□ -0.05
CHMP2A-204ENST00000597848 PMCHL1Q16048 86 aa14.71□□□□□ -0.05
CHMP2A-204ENST00000597848 FAM104AQ969W3 186 aa14.71□□□□□ -0.05
CHMP2A-204ENST00000597848 CHCHD1Q96BP2 118 aaKnown RBP14.71□□□□□ -0.05
CHMP2A-204ENST00000597848 TMEM141Q96I45 108 aa14.71□□□□□ -0.05
CHMP2A-204ENST00000597848 TRAV13-1A0A0B4J241 112 aa14.7□□□□□ -0.06
CHMP2A-204ENST00000597848 IGIPA6NJ69 53 aa14.7□□□□□ -0.06
CHMP2A-204ENST00000597848 Q6ZN92 141 aa14.7□□□□□ -0.06
CHMP2A-204ENST00000597848 ERASQ7Z444 233 aa14.69□□□□□ -0.06
CHMP2A-204ENST00000597848 MAPKAPK5-AS1Q8N8E1 139 aa14.69□□□□□ -0.06
CHMP2A-204ENST00000597848 BAALCQ8WXS3 180 aa14.69□□□□□ -0.06
CHMP2A-204ENST00000597848 CHCHD10Q8WYQ3 142 aaPredicted RBP14.69□□□□□ -0.06
CHMP2A-204ENST00000597848 GAGE12HA6NDE8 117 aa14.68□□□□□ -0.06
CHMP2A-204ENST00000597848 IFITM10A6NMD0 228 aa14.68□□□□□ -0.06
CHMP2A-204ENST00000597848 EREGO14944 169 aa14.68□□□□□ -0.06
CHMP2A-204ENST00000597848 HBDP02042 147 aa14.68□□□□□ -0.06
CHMP2A-204ENST00000597848 TIMM17AQ99595 171 aa14.68□□□□□ -0.06
CHMP2A-204ENST00000597848 VCX2Q9H322 139 aa14.68□□□□□ -0.06
CHMP2A-204ENST00000597848 CCL25O15444 150 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BKO60814 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HSBP1O75506 76 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BJP06899 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 NPSP0C0P6 89 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BOP23527 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BBP33778 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 XCL1P47992 114 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BDP58876 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BCP62807 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST2H2BEQ16778 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 PAPPA-AS1Q5QFB9 102 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 KRTAP26-1Q6PEX3 210 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 TEX43Q6ZNM6 134 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BHQ93079 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BNQ99877 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 HIST1H2BMQ99879 126 aa14.67□□□□□ -0.06
CHMP2A-204ENST00000597848 A0A087WTM6 91 aa14.66□□□□□ -0.06
CHMP2A-204ENST00000597848 A0A096LNJ9 63 aa14.66□□□□□ -0.06
CHMP2A-204ENST00000597848 C1orf196B1AJZ1 125 aa14.66□□□□□ -0.06
CHMP2A-204ENST00000597848 LECT2O14960 151 aa14.66□□□□□ -0.06
CHMP2A-204ENST00000597848 SERF1AO75920 110 aa14.66□□□□□ -0.06
CHMP2A-204ENST00000597848 ZC2HC1BQ5TFG8 222 aa14.65□□□□□ -0.06
CHMP2A-204ENST00000597848 C2orf88Q9BSF0 95 aa14.65□□□□□ -0.06
CHMP2A-204ENST00000597848 LRCOL1A6NCL2 159 aa14.64□□□□□ -0.07
CHMP2A-204ENST00000597848 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.63□□□□□ -0.07
CHMP2A-204ENST00000597848 AMELXQ99217 191 aa14.63□□□□□ -0.07
CHMP2A-204ENST00000597848 WFDC2Q14508 124 aa14.62□□□□□ -0.07
CHMP2A-204ENST00000597848 CD164L2Q6UWJ8 174 aa14.62□□□□□ -0.07
CHMP2A-204ENST00000597848 FAM19A2Q8N3H0 131 aa14.62□□□□□ -0.07
CHMP2A-204ENST00000597848 DNAH10Q8IVF4 4471 aa14.62□□□□□ -0.07
CHMP2A-204ENST00000597848 DNAH2Q9P225 4427 aa14.62□□□□□ -0.07
CHMP2A-204ENST00000597848 LINC00310P59036 64 aa14.61□□□□□ -0.07
CHMP2A-204ENST00000597848 FOXI1Q12951 378 aa14.61□□□□□ -0.07
CHMP2A-204ENST00000597848 PDZD11Q5EBL8 140 aa14.61□□□□□ -0.07
CHMP2A-204ENST00000597848 LINC00173Q6ZV60 143 aa14.61□□□□□ -0.07
CHMP2A-204ENST00000597848 NUPR1O60356 82 aa14.6□□□□□ -0.07
CHMP2A-204ENST00000597848 ATP5LO75964 103 aa14.6□□□□□ -0.07
CHMP2A-204ENST00000597848 A0A1B0GVY2 172 aa14.59□□□□□ -0.07
CHMP2A-204ENST00000597848 USP17L23D6RBM5 183 aa14.59□□□□□ -0.07
CHMP2A-204ENST00000597848 NDUFA6P56556 154 aa14.59□□□□□ -0.07
CHMP2A-204ENST00000597848 UBE2D1P51668 147 aa14.58□□□□□ -0.08
CHMP2A-204ENST00000597848 FRAS1Q86XX4 4008 aa14.57□□□□□ -0.08
CHMP2A-204ENST00000597848 PMVKQ15126 192 aa14.57□□□□□ -0.08
CHMP2A-204ENST00000597848 SPATA12Q7Z6I5 190 aa14.57□□□□□ -0.08
CHMP2A-204ENST00000597848 Q8N814 137 aa14.57□□□□□ -0.08
CHMP2A-204ENST00000597848 CST9LQ9H4G1 147 aa14.57□□□□□ -0.08
CHMP2A-204ENST00000597848 DNAH17Q9UFH2 4485 aa14.56□□□□□ -0.08
CHMP2A-204ENST00000597848 COX7A2LO14548 114 aa14.56□□□□□ -0.08
CHMP2A-204ENST00000597848 C14orf177Q52M58 125 aa14.56□□□□□ -0.08
CHMP2A-204ENST00000597848 LINC00242Q5T6M2 205 aa14.56□□□□□ -0.08
CHMP2A-204ENST00000597848 CFAP161Q6P656 301 aa14.56□□□□□ -0.08
CHMP2A-204ENST00000597848 MALP21145 153 aa14.55□□□□□ -0.08
CHMP2A-204ENST00000597848 C5orf38Q86SI9 138 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms