RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
FOXA3-202ENST00000594297 TSHBP01222 138 aa10.47□□□□□ -0.73
FOXA3-202ENST00000594297 LELP1Q5T871 98 aa10.47□□□□□ -0.73
FOXA3-202ENST00000594297 H7C423 109 aa10.46□□□□□ -0.73
FOXA3-202ENST00000594297 CHCHD5Q9BSY4 110 aa10.46□□□□□ -0.73
FOXA3-202ENST00000594297 LINC01546A6NGU7 62 aa10.45□□□□□ -0.74
FOXA3-202ENST00000594297 SERF1AO75920 110 aa10.45□□□□□ -0.74
FOXA3-202ENST00000594297 ESRGQ1W209 222 aa10.45□□□□□ -0.74
FOXA3-202ENST00000594297 CYSLTR1Q9Y271 337 aa10.45□□□□□ -0.74
FOXA3-202ENST00000594297 MRPS16Q9Y3D3 137 aaKnown RBP10.45□□□□□ -0.74
FOXA3-202ENST00000594297 TMEM262E9PQX1 116 aa10.44□□□□□ -0.74
FOXA3-202ENST00000594297 SMR3BP02814 79 aaPredicted RBP10.44□□□□□ -0.74
FOXA3-202ENST00000594297 KRTAP10-1P60331 282 aa10.44□□□□□ -0.74
FOXA3-202ENST00000594297 COA6Q5JTJ3 125 aaKnown RBP10.44□□□□□ -0.74
FOXA3-202ENST00000594297 AMMECR1LQ6DCA0 310 aa10.44□□□□□ -0.74
FOXA3-202ENST00000594297 DGAT2L7PQ6IED9 249 aa10.44□□□□□ -0.74
FOXA3-202ENST00000594297 CDPF1Q6NVV7 123 aa10.44□□□□□ -0.74
FOXA3-202ENST00000594297 DEFB104AQ8WTQ1 72 aa10.44□□□□□ -0.74
FOXA3-202ENST00000594297 PGPEP1Q9NXJ5 209 aa10.44□□□□□ -0.74
FOXA3-202ENST00000594297 SRRM2Q9UQ35 2752 aaKnown RBP10.44□□□□□ -0.74
FOXA3-202ENST00000594297 HBDP02042 147 aa10.43□□□□□ -0.74
FOXA3-202ENST00000594297 NTM-AS1Q6ZSK4 140 aa10.43□□□□□ -0.74
FOXA3-202ENST00000594297 C20orf203Q8NBC4 194 aa10.43□□□□□ -0.74
FOXA3-202ENST00000594297 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
FOXA3-202ENST00000594297 TMA7Q9Y2S6 64 aaKnown RBP10.43□□□□□ -0.74
FOXA3-202ENST00000594297 A0A087WX48 190 aa10.42□□□□□ -0.74
FOXA3-202ENST00000594297 ESDP10768 282 aa10.42□□□□□ -0.74
FOXA3-202ENST00000594297 S100A2P29034 98 aa10.42□□□□□ -0.74
FOXA3-202ENST00000594297 J3QL48 77 aa10.41□□□□□ -0.74
FOXA3-202ENST00000594297 DNAH10OSP0CZ25 163 aa10.41□□□□□ -0.74
FOXA3-202ENST00000594297 HAMPP81172 84 aa10.41□□□□□ -0.74
FOXA3-202ENST00000594297 PAPPA-AS1Q5QFB9 102 aa10.41□□□□□ -0.74
FOXA3-202ENST00000594297 C2orf66Q6UXQ4 117 aa10.41□□□□□ -0.74
FOXA3-202ENST00000594297 CHCHD7Q9BUK0 85 aa10.41□□□□□ -0.74
FOXA3-202ENST00000594297 EREGO14944 169 aa10.4□□□□□ -0.74
FOXA3-202ENST00000594297 ZNF25P17030 456 aaPredicted RBP10.4□□□□□ -0.74
FOXA3-202ENST00000594297 TOMM6Q96B49 74 aa10.4□□□□□ -0.74
FOXA3-202ENST00000594297 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
FOXA3-202ENST00000594297 SPANXA1Q9NS26 97 aa10.4□□□□□ -0.74
FOXA3-202ENST00000594297 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.39□□□□□ -0.75
FOXA3-202ENST00000594297 IGKV2-29A2NJV5 120 aaPredicted RBP10.39□□□□□ -0.75
FOXA3-202ENST00000594297 ATP5LO75964 103 aa10.39□□□□□ -0.75
FOXA3-202ENST00000594297 GAGE6Q13070 117 aa10.39□□□□□ -0.75
FOXA3-202ENST00000594297 OR5A1Q8NGJ0 315 aa10.39□□□□□ -0.75
FOXA3-202ENST00000594297 SCGB3A1Q96QR1 104 aa10.39□□□□□ -0.75
FOXA3-202ENST00000594297 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
FOXA3-202ENST00000594297 HSPB8Q9UJY1 196 aa10.39□□□□□ -0.75
FOXA3-202ENST00000594297 TRAV9-2A0A087WT02 112 aa10.38□□□□□ -0.75
FOXA3-202ENST00000594297 LEPROTL1O95214 131 aa10.38□□□□□ -0.75
FOXA3-202ENST00000594297 NPSP0C0P6 89 aa10.38□□□□□ -0.75
FOXA3-202ENST00000594297 FGF6P10767 208 aa10.38□□□□□ -0.75
FOXA3-202ENST00000594297 Q6ZN92 141 aa10.38□□□□□ -0.75
FOXA3-202ENST00000594297 ERASQ7Z444 233 aa10.38□□□□□ -0.75
FOXA3-202ENST00000594297 TMEM141Q96I45 108 aa10.38□□□□□ -0.75
FOXA3-202ENST00000594297 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.37□□□□□ -0.75
FOXA3-202ENST00000594297 SIVA1O15304 175 aa10.37□□□□□ -0.75
FOXA3-202ENST00000594297 SNRPEP62304 92 aaKnown RBP10.37□□□□□ -0.75
FOXA3-202ENST00000594297 PMCHL1Q16048 86 aa10.37□□□□□ -0.75
FOXA3-202ENST00000594297 MRPL52Q86TS9 123 aaKnown RBP10.37□□□□□ -0.75
FOXA3-202ENST00000594297 FAM19A2Q8N3H0 131 aa10.37□□□□□ -0.75
FOXA3-202ENST00000594297 PACRGQ96M98 296 aaPredicted RBP10.37□□□□□ -0.75
FOXA3-202ENST00000594297 PYGO1Q9Y3Y4 419 aa10.37□□□□□ -0.75
FOXA3-202ENST00000594297 CSDC2Q9Y534 153 aaKnown RBP10.37□□□□□ -0.75
FOXA3-202ENST00000594297 A0A087WTM6 91 aa10.36□□□□□ -0.75
FOXA3-202ENST00000594297 A0A1B0GUV1 79 aa10.36□□□□□ -0.75
FOXA3-202ENST00000594297 FAM229AH3BQW9 127 aa10.36□□□□□ -0.75
FOXA3-202ENST00000594297 RPL39P62891 51 aaKnown RBP10.36□□□□□ -0.75
FOXA3-202ENST00000594297 TIMM17AQ99595 171 aa10.36□□□□□ -0.75
FOXA3-202ENST00000594297 K7EP13 123 aa10.35□□□□□ -0.75
FOXA3-202ENST00000594297 NUPR1O60356 82 aa10.35□□□□□ -0.75
FOXA3-202ENST00000594297 LINC00310P59036 64 aa10.35□□□□□ -0.75
FOXA3-202ENST00000594297 PDZD11Q5EBL8 140 aa10.35□□□□□ -0.75
FOXA3-202ENST00000594297 UBE2D4Q9Y2X8 147 aa10.35□□□□□ -0.75
FOXA3-202ENST00000594297 HMCN2Q8NDA2 5059 aa10.35□□□□□ -0.75
FOXA3-202ENST00000594297 UBR4Q5T4S7 5183 aa10.35□□□□□ -0.75
FOXA3-202ENST00000594297 C5orf52A6NGY3 159 aa10.34□□□□□ -0.75
FOXA3-202ENST00000594297 FABP4P15090 132 aa10.34□□□□□ -0.75
FOXA3-202ENST00000594297 RBX1P62877 108 aa10.34□□□□□ -0.75
FOXA3-202ENST00000594297 WFDC10BQ8IUB3 73 aa10.34□□□□□ -0.75
FOXA3-202ENST00000594297 C10orf126Q8N4M7 172 aa10.34□□□□□ -0.75
FOXA3-202ENST00000594297 VCX2Q9H322 139 aa10.34□□□□□ -0.75
FOXA3-202ENST00000594297 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
FOXA3-202ENST00000594297 PRSS1P07477 247 aa10.33□□□□□ -0.76
FOXA3-202ENST00000594297 MRPS36P82909 103 aaKnown RBP10.33□□□□□ -0.76
FOXA3-202ENST00000594297 LINC01556Q5JQF7 62 aa10.33□□□□□ -0.76
FOXA3-202ENST00000594297 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
FOXA3-202ENST00000594297 ZNF664Q8N3J9 261 aa10.33□□□□□ -0.76
FOXA3-202ENST00000594297 C2orf88Q9BSF0 95 aa10.33□□□□□ -0.76
FOXA3-202ENST00000594297 MAP1LC3CQ9BXW4 147 aa10.33□□□□□ -0.76
FOXA3-202ENST00000594297 IGIPA6NJ69 53 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 IGHV3-30P01768 117 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 IGHV3-33P01772 117 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 IGHV3-30-3P0DP02 117 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 IGHV3-30-5P0DP03 117 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 GCSHP23434 173 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 MPV17L2Q567V2 206 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 TEX43Q6ZNM6 134 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
FOXA3-202ENST00000594297 DNAH8Q96JB1 4490 aa10.31□□□□□ -0.76
FOXA3-202ENST00000594297 A0A096LNJ9 63 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms