RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 FABP5P3A8MUU1 101 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 ZNF727A8MUV8 499 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 SH2D1AO60880 128 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 CST7O76096 145 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 RAB3DO95716 219 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 FOXA3P55318 350 aaPredicted RBP1.38□□□□□ -2.19
VRK3-204ENST00000593912 DEFA1P59665 94 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 FLI1Q01543 452 aaPredicted RBP1.38□□□□□ -2.19
VRK3-204ENST00000593912 SPANXN2Q5MJ10 180 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 Q5VV11 94 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 HRCT1Q6UXD1 115 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 C8orf59Q8N0T1 100 aaPredicted RBP1.38□□□□□ -2.19
VRK3-204ENST00000593912 BTF3L4Q96K17 158 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 SMIM8Q96KF7 97 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 CCDC32Q9BV29 185 aa1.38□□□□□ -2.19
VRK3-204ENST00000593912 RSL24D1Q9UHA3 163 aaKnown RBP1.38□□□□□ -2.19
VRK3-204ENST00000593912 A8MWP4 228 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 C1orf196B1AJZ1 125 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 H3BMQ9 156 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 UPK1BO75841 260 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 SCGB1D2O95969 90 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 APCSP02743 223 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 SMIM17P0DL12 118 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 SLC25A6P12236 298 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 ZNF25P17030 456 aaPredicted RBP1.37□□□□□ -2.19
VRK3-204ENST00000593912 TGFBR1P36897 503 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 ID3Q02535 119 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 KIAA0087Q14695 138 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 RASL11AQ6T310 242 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 ATP11AUNQ6ZP68 121 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 FAM231DQ6ZW35 169 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 DEDD2Q8WXF8 326 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 TMEM101Q96IK0 257 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 OBSCN-AS1Q96MR7 158 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 GGACTQ9BVM4 153 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 KRTAP4-3Q9BYR4 195 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 TMEM126AQ9H061 195 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 CDC42SE2Q9NRR3 84 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 MED9Q9NWA0 146 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 MBD2Q9UBB5 411 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 EXTL2Q9UBQ6 330 aa1.37□□□□□ -2.19
VRK3-204ENST00000593912 A0A0G2JQZ4 141 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 TRBV30A0A0K0K1B3 111 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 F8WDY8 70 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 M0R378 163 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 CIB2O75838 187 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 NCS1P62166 190 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 FAM74A1Q5RGS3 127 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 SPANXN1Q5VSR9 72 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 GAGE2AQ6NT46 116 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 SSBP3-AS1Q7Z2R9 100 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 NPCDR1Q9BY65 106 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 GNB1LQ9BYB4 327 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 NIT2Q9NQR4 276 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 CYTL1Q9NRR1 136 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 ARL2-SNX15V9GYD0 113 aa1.36□□□□□ -2.19
VRK3-204ENST00000593912 C7orf66A4D0T2 115 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 H7C423 109 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 HMGB3O15347 200 aaKnown RBP1.35□□□□□ -2.19
VRK3-204ENST00000593912 ANXA3P12429 323 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 TAGLN2P37802 199 aaKnown RBP1.35□□□□□ -2.19
VRK3-204ENST00000593912 LINC00483Q53H64 154 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 C9orf153Q5TBE3 101 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 FAM19A3Q7Z5A8 133 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 LINC01551Q86U37 167 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 TMEM229BQ8NBD8 167 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 Q8NDZ9 215 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 MPLKIPQ8TAP9 179 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 AP1S3Q96PC3 154 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 ALKBH7Q9BT30 221 aaPredicted RBP1.35□□□□□ -2.19
VRK3-204ENST00000593912 IMUPQ9GZP8 106 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 GEMIN7Q9H840 131 aaKnown RBP1.35□□□□□ -2.19
VRK3-204ENST00000593912 GSKIPQ9P0R6 139 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 MTFP1Q9UDX5 166 aa1.35□□□□□ -2.19
VRK3-204ENST00000593912 ZNF706Q9Y5V0 76 aaPredicted RBP1.35□□□□□ -2.19
VRK3-204ENST00000593912 SERTM2A0A1B0GWG4 89 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 A6NHS1 94 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 DISC1C4P0D8 188 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 SNAI2O43623 268 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 HRES1P13985 223 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 BCAP31P51572 246 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 KRTAP19-8Q3LI54 63 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 KHDC3LQ587J8 217 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 SAPCD1Q5SSQ6 148 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 Q6ZUT4 128 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 NKAPP1Q8N9T2 125 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 C5orf17Q8NAS9 161 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 THAP6Q8TBB0 222 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 SMCR5Q8TEV8 140 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 RPL39LQ96EH5 51 aaKnown RBP1.34□□□□□ -2.19
VRK3-204ENST00000593912 LIMD2Q9BT23 127 aa1.34□□□□□ -2.19
VRK3-204ENST00000593912 IGLV5-37A0A075B6J1 123 aa1.33□□□□□ -2.2
VRK3-204ENST00000593912 IGHV3OR16-9A0A0B4J2B5 98 aa1.33□□□□□ -2.2
VRK3-204ENST00000593912 LOC107984156A0A0G2JMH3 177 aa1.33□□□□□ -2.2
VRK3-204ENST00000593912 SMIM31A0A1B0GVY4 71 aa1.33□□□□□ -2.2
VRK3-204ENST00000593912 H7C2G1 150 aa1.33□□□□□ -2.2
VRK3-204ENST00000593912 HPGDSO60760 199 aa1.33□□□□□ -2.2
VRK3-204ENST00000593912 TMEM127O75204 238 aa1.33□□□□□ -2.2
VRK3-204ENST00000593912 NCR2O95944 276 aa1.33□□□□□ -2.2
VRK3-204ENST00000593912 GHRHP01286 108 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms