RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CIRBPQ14011 172 aaKnown RBP2.93□□□□□ -1.94
SMAD4-216ENST00000593223 SDIM1Q6ZPB5 146 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 RPRMLQ8N4K4 120 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 CHCHD1Q96BP2 118 aaKnown RBP2.93□□□□□ -1.94
SMAD4-216ENST00000593223 TMEM242Q9NWH2 141 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 UQCR10Q9UDW1 63 aa2.93□□□□□ -1.94
SMAD4-216ENST00000593223 IGHV3-15A0A0B4J1V0 119 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 PDCD5O14737 125 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 ZNF737O75373 536 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 PROSCO94903 275 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 STATHP02808 62 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 MPV17P39210 176 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 XCL1P47992 114 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 SS18Q15532 418 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 SPRNQ5BIV9 151 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 MIC13Q5XKP0 118 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 TSKUQ8WUA8 353 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 PATE1Q8WXA2 126 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 OR5V1Q9UGF6 321 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 RABAC1Q9UI14 185 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 ROS1P08922 2347 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 CR1P17927 2039 aa2.92□□□□□ -1.94
SMAD4-216ENST00000593223 DNAH9Q9NYC9 4486 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 CADP27708 2225 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 A0A1W2PQD3 144 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 C19orf71A6NCJ1 209 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 E7EQL1 145 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 TIMM17BO60830 172 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 CPSF4O95639 269 aaKnown RBP2.91□□□□□ -1.94
SMAD4-216ENST00000593223 CYB5AP00167 134 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 SHBGP04278 402 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 FXYD2P54710 66 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 Q5BKY6 102 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 Q6ZQT7 251 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 C15orf53Q8NAA6 179 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 VSTM2AQ8TAG5 236 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 MUC7Q8TAX7 377 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 ZNF355PQ9NSJ1 428 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 ZNF222Q9UK12 451 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 ICOSQ9Y6W8 199 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 LY96Q9Y6Y9 160 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 TCHHQ07283 1943 aa2.91□□□□□ -1.94
SMAD4-216ENST00000593223 IGLV4-60A0A075B6I1 120 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 PIGBOS1A0A0B4J2F0 54 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 C17orf112F2Z3M2 114 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 MRPS14O60783 128 aaKnown RBP2.9□□□□□ -1.95
SMAD4-216ENST00000593223 WISP3O95389 354 aaPredicted RBP2.9□□□□□ -1.95
SMAD4-216ENST00000593223 LHBP01229 141 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 PEBP1P30086 187 aaKnown RBP2.9□□□□□ -1.95
SMAD4-216ENST00000593223 SUPT4H1P63272 117 aaKnown RBP2.9□□□□□ -1.95
SMAD4-216ENST00000593223 DEFA5Q01523 94 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 UNQ5815/PRO19632Q6UWF5 114 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 ALKAL2Q6UX46 152 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 FP248Q71RG6 208 aaPredicted RBP2.9□□□□□ -1.95
SMAD4-216ENST00000593223 SBSPONQ8IVN8 264 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 CLEC2BQ92478 149 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 SPTSSAQ969W0 71 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 IMMP2LQ96T52 175 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 NABP2Q9BQ15 211 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 DPH3P1Q9H4G8 78 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 U3KQK5 164 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 NYNRINQ9P2P1 1898 aaKnown RBP2.9□□□□□ -1.95
SMAD4-216ENST00000593223 FREM1Q5H8C1 2179 aa2.9□□□□□ -1.95
SMAD4-216ENST00000593223 UBE2L5PA0A1B0GUS4 154 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 IGLC7A0M8Q6 106 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 TMEM235A6NFC5 223 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 A6NN06 94 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 J3QLW9 94 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 DSCAMO60469 2012 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 IL5P05113 134 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 PIPP12273 146 aaPredicted RBP2.89□□□□□ -1.95
SMAD4-216ENST00000593223 RPL28P46779 137 aaKnown RBP2.89□□□□□ -1.95
SMAD4-216ENST00000593223 UBE2L3P68036 154 aaKnown RBP2.89□□□□□ -1.95
SMAD4-216ENST00000593223 C5orf38Q86SI9 138 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 Q8NDZ9 215 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 AQP3Q92482 292 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 LINC00574Q9H8X3 128 aa2.89□□□□□ -1.95
SMAD4-216ENST00000593223 MPDZO75970 2070 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 TRAV14DV4A0A0A6YYC5 116 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 IGHV1-24A0A0C4DH33 117 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 LCE6AA0A183 80 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 RBAKDNA6NC62 111 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 H3BPC8 53 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 SFT2D2O95562 160 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 NMBP08949 121 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 COL8A2P25067 703 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 ZNF117Q03924 483 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 EIF4EBP1Q13541 118 aaPredicted RBP2.88□□□□□ -1.95
SMAD4-216ENST00000593223 TDRG1Q3Y452 100 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 C2orf91Q6ZV80 131 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 C10orf105Q8TEF2 133 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 Q96M85 177 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 DSCR8Q96T75 97 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 CCL19Q99731 98 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 RETNLBQ9BQ08 111 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 SLC50A1Q9BRV3 221 aa2.88□□□□□ -1.95
SMAD4-216ENST00000593223 TIMM9Q9Y5J7 89 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms