RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LGALS9CQ6DKI2 356 aa9.33□□□□□ -0.92
VMP1-217ENST00000593168 LINC00518Q8N0U6 118 aa9.33□□□□□ -0.92
VMP1-217ENST00000593168 DNAH10Q8IVF4 4471 aa9.32□□□□□ -0.92
VMP1-217ENST00000593168 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.32□□□□□ -0.92
VMP1-217ENST00000593168 TRAV12-1A0A0B4J245 112 aa9.32□□□□□ -0.92
VMP1-217ENST00000593168 IGKV2-29A2NJV5 120 aaPredicted RBP9.32□□□□□ -0.92
VMP1-217ENST00000593168 PAPPA-AS1Q5QFB9 102 aa9.32□□□□□ -0.92
VMP1-217ENST00000593168 UBE2D4Q9Y2X8 147 aa9.32□□□□□ -0.92
VMP1-217ENST00000593168 CSDC2Q9Y534 153 aaKnown RBP9.32□□□□□ -0.92
VMP1-217ENST00000593168 TIRAPP58753 221 aa9.31□□□□□ -0.92
VMP1-217ENST00000593168 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
VMP1-217ENST00000593168 BAALCQ8WXS3 180 aa9.31□□□□□ -0.92
VMP1-217ENST00000593168 A0A087WX48 190 aa9.3□□□□□ -0.92
VMP1-217ENST00000593168 H0Y8G0 127 aa9.3□□□□□ -0.92
VMP1-217ENST00000593168 UBE2L6O14933 153 aa9.3□□□□□ -0.92
VMP1-217ENST00000593168 FGF6P10767 208 aa9.3□□□□□ -0.92
VMP1-217ENST00000593168 MRPS36P82909 103 aaKnown RBP9.3□□□□□ -0.92
VMP1-217ENST00000593168 ODF1Q14990 250 aa9.3□□□□□ -0.92
VMP1-217ENST00000593168 PMVKQ15126 192 aa9.3□□□□□ -0.92
VMP1-217ENST00000593168 LINC00476Q8WZB0 136 aa9.3□□□□□ -0.92
VMP1-217ENST00000593168 C12orf57Q99622 126 aa9.3□□□□□ -0.92
VMP1-217ENST00000593168 IGLV4-3A0A075B6K6 122 aa9.29□□□□□ -0.92
VMP1-217ENST00000593168 PRSS29PA6NIE9 313 aa9.29□□□□□ -0.92
VMP1-217ENST00000593168 DGAT2L7PQ6IED9 249 aa9.29□□□□□ -0.92
VMP1-217ENST00000593168 TEX43Q6ZNM6 134 aa9.29□□□□□ -0.92
VMP1-217ENST00000593168 VCX2Q9H322 139 aa9.29□□□□□ -0.92
VMP1-217ENST00000593168 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
VMP1-217ENST00000593168 LELP1Q5T871 98 aa9.28□□□□□ -0.92
VMP1-217ENST00000593168 CEMP1Q6PRD7 247 aaPredicted RBP9.28□□□□□ -0.92
VMP1-217ENST00000593168 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
VMP1-217ENST00000593168 C15orf53Q8NAA6 179 aa9.28□□□□□ -0.92
VMP1-217ENST00000593168 FAM104AQ969W3 186 aa9.28□□□□□ -0.92
VMP1-217ENST00000593168 AMELXQ99217 191 aa9.28□□□□□ -0.92
VMP1-217ENST00000593168 OPRPNQ99935 248 aaPredicted RBP9.28□□□□□ -0.92
VMP1-217ENST00000593168 CHCHD5Q9BSY4 110 aa9.28□□□□□ -0.92
VMP1-217ENST00000593168 CST9LQ9H4G1 147 aa9.28□□□□□ -0.92
VMP1-217ENST00000593168 F8VRH5 84 aa9.27□□□□□ -0.93
VMP1-217ENST00000593168 GAGE6Q13070 117 aa9.27□□□□□ -0.93
VMP1-217ENST00000593168 AMMECR1LQ6DCA0 310 aa9.27□□□□□ -0.93
VMP1-217ENST00000593168 CDPF1Q6NVV7 123 aa9.27□□□□□ -0.93
VMP1-217ENST00000593168 CHTOPQ9Y3Y2 248 aaKnown RBP9.27□□□□□ -0.93
VMP1-217ENST00000593168 A0A1B0GUV1 79 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 LY6G6CO95867 125 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 PKIAP61925 76 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 S100A12P80511 92 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 OR5A1Q8NGJ0 315 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 PMCHL2Q9BQD1 86 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 CDC42SE2Q9NRR3 84 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 MRPL35Q9NZE8 188 aaKnown RBP9.26□□□□□ -0.93
VMP1-217ENST00000593168 RYR1P21817 5038 aa9.26□□□□□ -0.93
VMP1-217ENST00000593168 DPM2O94777 84 aa9.25□□□□□ -0.93
VMP1-217ENST00000593168 ZC2HC1BQ5TFG8 222 aa9.25□□□□□ -0.93
VMP1-217ENST00000593168 Q6ZUT4 128 aa9.25□□□□□ -0.93
VMP1-217ENST00000593168 ZNF664Q8N3J9 261 aa9.25□□□□□ -0.93
VMP1-217ENST00000593168 KIAA1109Q2LD37 5005 aa9.25□□□□□ -0.93
VMP1-217ENST00000593168 TRAV9-2A0A087WT02 112 aa9.24□□□□□ -0.93
VMP1-217ENST00000593168 TMEM262E9PQX1 116 aa9.24□□□□□ -0.93
VMP1-217ENST00000593168 IGKCP01834 107 aa9.24□□□□□ -0.93
VMP1-217ENST00000593168 PLNP26678 52 aa9.24□□□□□ -0.93
VMP1-217ENST00000593168 C2orf88Q9BSF0 95 aa9.24□□□□□ -0.93
VMP1-217ENST00000593168 TRAV8-6A0A0B4J262 113 aa9.23□□□□□ -0.93
VMP1-217ENST00000593168 ESRGQ1W209 222 aa9.23□□□□□ -0.93
VMP1-217ENST00000593168 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
VMP1-217ENST00000593168 VAMP8Q9BV40 100 aa9.23□□□□□ -0.93
VMP1-217ENST00000593168 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
VMP1-217ENST00000593168 IGLL5B9A064 214 aa9.22□□□□□ -0.93
VMP1-217ENST00000593168 RBX1P62877 108 aa9.22□□□□□ -0.93
VMP1-217ENST00000593168 NFE4Q86UQ8 179 aa9.22□□□□□ -0.93
VMP1-217ENST00000593168 IGLV4-60A0A075B6I1 120 aa9.21□□□□□ -0.94
VMP1-217ENST00000593168 HSBP1L1C9JCN9 74 aa9.21□□□□□ -0.94
VMP1-217ENST00000593168 IGLC3P0DOY3 106 aa9.21□□□□□ -0.94
VMP1-217ENST00000593168 UBE2D1P51668 147 aa9.21□□□□□ -0.94
VMP1-217ENST00000593168 MPV17L2Q567V2 206 aa9.21□□□□□ -0.94
VMP1-217ENST00000593168 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
VMP1-217ENST00000593168 FAM19A3Q7Z5A8 133 aa9.2□□□□□ -0.94
VMP1-217ENST00000593168 PAM16Q9Y3D7 125 aa9.2□□□□□ -0.94
VMP1-217ENST00000593168 A0A0J9YXV3 536 aa9.19□□□□□ -0.94
VMP1-217ENST00000593168 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
VMP1-217ENST00000593168 hDV102S1A0JD36 115 aa9.19□□□□□ -0.94
VMP1-217ENST00000593168 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
VMP1-217ENST00000593168 SEC11AP67812 179 aa9.19□□□□□ -0.94
VMP1-217ENST00000593168 MAJINQ3KP22 176 aa9.19□□□□□ -0.94
VMP1-217ENST00000593168 NUPR2A6NF83 97 aa9.18□□□□□ -0.94
VMP1-217ENST00000593168 CCL18P55774 89 aa9.18□□□□□ -0.94
VMP1-217ENST00000593168 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
VMP1-217ENST00000593168 CHAC1Q9BUX1 264 aa9.18□□□□□ -0.94
VMP1-217ENST00000593168 VPS13DQ5THJ4 4388 aa9.17□□□□□ -0.94
VMP1-217ENST00000593168 TCTAP57738 103 aa9.17□□□□□ -0.94
VMP1-217ENST00000593168 STPG4Q8N801 248 aa9.17□□□□□ -0.94
VMP1-217ENST00000593168 KLK5Q9Y337 293 aaPredicted RBP9.17□□□□□ -0.94
VMP1-217ENST00000593168 DNAH6Q9C0G6 4158 aa9.16□□□□□ -0.94
VMP1-217ENST00000593168 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
VMP1-217ENST00000593168 CCL25O15444 150 aa9.16□□□□□ -0.94
VMP1-217ENST00000593168 ANKRD39Q53RE8 183 aa9.16□□□□□ -0.94
VMP1-217ENST00000593168 LINC00242Q5T6M2 205 aa9.16□□□□□ -0.94
VMP1-217ENST00000593168 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
VMP1-217ENST00000593168 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
VMP1-217ENST00000593168 APLNQ9ULZ1 77 aa9.16□□□□□ -0.94
VMP1-217ENST00000593168 MRPS16Q9Y3D3 137 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms