RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 TIMM21Q9BVV7 248 aa6.6□□□□□ -1.35
TPM4-216ENST00000592822 NXT2Q9NPJ8 142 aaKnown RBP6.6□□□□□ -1.35
TPM4-216ENST00000592822 CDC42SE2Q9NRR3 84 aa6.6□□□□□ -1.35
TPM4-216ENST00000592822 PKHD1P08F94 4074 aa6.59□□□□□ -1.35
TPM4-216ENST00000592822 SCO1O75880 301 aa6.59□□□□□ -1.35
TPM4-216ENST00000592822 FAM104AQ969W3 186 aa6.59□□□□□ -1.35
TPM4-216ENST00000592822 TMEM18Q96B42 140 aa6.59□□□□□ -1.35
TPM4-216ENST00000592822 TMEM101Q96IK0 257 aa6.59□□□□□ -1.35
TPM4-216ENST00000592822 C1orf43Q9BWL3 253 aa6.59□□□□□ -1.35
TPM4-216ENST00000592822 CSDC2Q9Y534 153 aaKnown RBP6.59□□□□□ -1.35
TPM4-216ENST00000592822 COX11Q9Y6N1 276 aa6.59□□□□□ -1.35
TPM4-216ENST00000592822 IGLV10-54A0A075B6I4 117 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 TRAV8-4A0A0B4J246 113 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 IGKV3OR2-268A0A0C4DH90 116 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 COLCA2A8K830 154 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 K7EMI3 77 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 SMAGPQ0VAQ4 97 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 WFDC2Q14508 124 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 DGAT2L7PQ6IED9 249 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 ZNF664Q8N3J9 261 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 PRSS3P2Q8NHM4 247 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 BAALCQ8WXS3 180 aa6.58□□□□□ -1.36
TPM4-216ENST00000592822 LINC01546A6NGU7 62 aa6.57□□□□□ -1.36
TPM4-216ENST00000592822 LECT2O14960 151 aa6.57□□□□□ -1.36
TPM4-216ENST00000592822 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
TPM4-216ENST00000592822 ORMDL2Q53FV1 153 aa6.57□□□□□ -1.36
TPM4-216ENST00000592822 RNASE13Q5GAN3 156 aaKnown RBP6.57□□□□□ -1.36
TPM4-216ENST00000592822 Q6ZUT4 128 aa6.57□□□□□ -1.36
TPM4-216ENST00000592822 C18orf32Q8TCD1 76 aa6.57□□□□□ -1.36
TPM4-216ENST00000592822 OPRPNQ99935 248 aaPredicted RBP6.57□□□□□ -1.36
TPM4-216ENST00000592822 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
TPM4-216ENST00000592822 DYNC1H1Q14204 4646 aaKnown RBP6.57□□□□□ -1.36
TPM4-216ENST00000592822 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
TPM4-216ENST00000592822 EREGO14944 169 aa6.56□□□□□ -1.36
TPM4-216ENST00000592822 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
TPM4-216ENST00000592822 C2orf66Q6UXQ4 117 aa6.56□□□□□ -1.36
TPM4-216ENST00000592822 SPATA12Q7Z6I5 190 aa6.56□□□□□ -1.36
TPM4-216ENST00000592822 URB1-AS1Q96HZ7 61 aa6.56□□□□□ -1.36
TPM4-216ENST00000592822 CYSLTR1Q9Y271 337 aa6.56□□□□□ -1.36
TPM4-216ENST00000592822 BIRC6Q9NR09 4857 aa6.56□□□□□ -1.36
TPM4-216ENST00000592822 TRGC2P03986 189 aa6.55□□□□□ -1.36
TPM4-216ENST00000592822 FUSP35637 526 aaKnown RBP eCLIP6.55□□□□□ -1.36
TPM4-216ENST00000592822 FA2HQ7L5A8 372 aa6.55□□□□□ -1.36
TPM4-216ENST00000592822 Q8N814 137 aa6.55□□□□□ -1.36
TPM4-216ENST00000592822 CHCHD10Q8WYQ3 142 aaPredicted RBP6.55□□□□□ -1.36
TPM4-216ENST00000592822 PYGO1Q9Y3Y4 419 aa6.55□□□□□ -1.36
TPM4-216ENST00000592822 IGLV4-3A0A075B6K6 122 aa6.54□□□□□ -1.36
TPM4-216ENST00000592822 GAGE12HA6NDE8 117 aa6.54□□□□□ -1.36
TPM4-216ENST00000592822 IGIPA6NJ69 53 aa6.54□□□□□ -1.36
TPM4-216ENST00000592822 ATP6V1G1O75348 118 aa6.54□□□□□ -1.36
TPM4-216ENST00000592822 TOMM6Q96B49 74 aa6.54□□□□□ -1.36
TPM4-216ENST00000592822 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 CCL25O15444 150 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 LINC00614P0C842 121 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 S100A1P23297 94 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 G0S2P27469 103 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 XCL1P47992 114 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 FOXI1Q12951 378 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 SS18Q15532 418 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 PGPEP1Q9NXJ5 209 aa6.53□□□□□ -1.36
TPM4-216ENST00000592822 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
TPM4-216ENST00000592822 TRAV13-1A0A0B4J241 112 aa6.52□□□□□ -1.37
TPM4-216ENST00000592822 LINC00173Q6ZV60 143 aa6.52□□□□□ -1.37
TPM4-216ENST00000592822 TMEM141Q96I45 108 aa6.52□□□□□ -1.37
TPM4-216ENST00000592822 AP5S1Q9NUS5 200 aa6.52□□□□□ -1.37
TPM4-216ENST00000592822 A0A096LNJ9 63 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 IFITM10A6NMD0 228 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 C16orf90A8MZG2 172 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 NPSP0C0P6 89 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 RAB5BP61020 215 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 ERASQ7Z444 233 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 NTN5Q8WTR8 489 aaPredicted RBP6.51□□□□□ -1.37
TPM4-216ENST00000592822 SCGB3A1Q96QR1 104 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 AMELXQ99217 191 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 TIMM17AQ99595 171 aa6.51□□□□□ -1.37
TPM4-216ENST00000592822 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.5□□□□□ -1.37
TPM4-216ENST00000592822 IGLV5-52A0A0A0MRZ9 124 aa6.5□□□□□ -1.37
TPM4-216ENST00000592822 PRSS1P07477 247 aa6.5□□□□□ -1.37
TPM4-216ENST00000592822 PMCHL1Q16048 86 aa6.5□□□□□ -1.37
TPM4-216ENST00000592822 C14orf177Q52M58 125 aa6.5□□□□□ -1.37
TPM4-216ENST00000592822 TEX43Q6ZNM6 134 aa6.5□□□□□ -1.37
TPM4-216ENST00000592822 C15orf56Q8N910 161 aa6.5□□□□□ -1.37
TPM4-216ENST00000592822 VCX2Q9H322 139 aa6.5□□□□□ -1.37
TPM4-216ENST00000592822 LINC01549A6NIU2 74 aa6.49□□□□□ -1.37
TPM4-216ENST00000592822 UBE2D1P51668 147 aa6.49□□□□□ -1.37
TPM4-216ENST00000592822 Q6ZN92 141 aa6.49□□□□□ -1.37
TPM4-216ENST00000592822 BAGE3Q86Y29 109 aa6.49□□□□□ -1.37
TPM4-216ENST00000592822 CHCHD1Q96BP2 118 aaKnown RBP6.49□□□□□ -1.37
TPM4-216ENST00000592822 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
TPM4-216ENST00000592822 IGHV3OR16-9A0A0B4J2B5 98 aa6.48□□□□□ -1.37
TPM4-216ENST00000592822 COX7A2LO14548 114 aa6.48□□□□□ -1.37
TPM4-216ENST00000592822 HBDP02042 147 aa6.48□□□□□ -1.37
TPM4-216ENST00000592822 LINC00310P59036 64 aa6.48□□□□□ -1.37
TPM4-216ENST00000592822 COX6A2Q02221 97 aa6.48□□□□□ -1.37
TPM4-216ENST00000592822 PDZD11Q5EBL8 140 aa6.48□□□□□ -1.37
TPM4-216ENST00000592822 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms