RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
RANBP3-229ENST00000592771 FAM110AQ9BQ89 295 aa10.33□□□□□ -0.76
RANBP3-229ENST00000592771 SPXQ9BT56 116 aa10.33□□□□□ -0.76
RANBP3-229ENST00000592771 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
RANBP3-229ENST00000592771 A0A0J9YXY3 114 aa10.32□□□□□ -0.76
RANBP3-229ENST00000592771 STHQ8IWL8 128 aa10.32□□□□□ -0.76
RANBP3-229ENST00000592771 C11orf72Q8NBR9 251 aa10.32□□□□□ -0.76
RANBP3-229ENST00000592771 RNF183Q96D59 192 aa10.32□□□□□ -0.76
RANBP3-229ENST00000592771 LINC01600Q96MT4 127 aa10.32□□□□□ -0.76
RANBP3-229ENST00000592771 IGHV1-58A0A0C4DH39 117 aa10.31□□□□□ -0.76
RANBP3-229ENST00000592771 CIDEAO60543 219 aa10.31□□□□□ -0.76
RANBP3-229ENST00000592771 IGHV3-30-3P0DP02 117 aa10.31□□□□□ -0.76
RANBP3-229ENST00000592771 MUSTN1Q8IVN3 82 aa10.31□□□□□ -0.76
RANBP3-229ENST00000592771 NSD1Q96L73 2696 aaPredicted RBP10.31□□□□□ -0.76
RANBP3-229ENST00000592771 CRLF1O75462 422 aa10.31□□□□□ -0.76
RANBP3-229ENST00000592771 BEAN1Q3B7T3 259 aa10.31□□□□□ -0.76
RANBP3-229ENST00000592771 SPANXDQ9BXN6 97 aa10.31□□□□□ -0.76
RANBP3-229ENST00000592771 SPANXCQ9NY87 97 aa10.31□□□□□ -0.76
RANBP3-229ENST00000592771 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
RANBP3-229ENST00000592771 NACAE9PAV3 2078 aa10.3□□□□□ -0.76
RANBP3-229ENST00000592771 A0A1B0GV72 72 aa10.3□□□□□ -0.76
RANBP3-229ENST00000592771 TMEM262E9PQX1 116 aa10.3□□□□□ -0.76
RANBP3-229ENST00000592771 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
RANBP3-229ENST00000592771 LINC01587Q99440 93 aa10.3□□□□□ -0.76
RANBP3-229ENST00000592771 PRM2P04554 102 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 SFTA2Q6UW10 78 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 CDIP1Q9H305 208 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 C19orf73Q9NVV2 129 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 C2CD3Q4AC94 2353 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 IGHV3-53P01767 116 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 HTN1P15515 57 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 C1orf158Q8N1D5 194 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 CARD19Q96LW7 228 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 CHCHD7Q9BUK0 85 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 XCL2Q9UBD3 114 aa10.29□□□□□ -0.76
RANBP3-229ENST00000592771 TIMM17BO60830 172 aa10.28□□□□□ -0.76
RANBP3-229ENST00000592771 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
RANBP3-229ENST00000592771 LITAFQ99732 161 aa10.28□□□□□ -0.76
RANBP3-229ENST00000592771 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
RANBP3-229ENST00000592771 SLC25A20O43772 301 aa10.27□□□□□ -0.76
RANBP3-229ENST00000592771 IL17DQ8TAD2 202 aa10.27□□□□□ -0.76
RANBP3-229ENST00000592771 VSIG2Q96IQ7 327 aa10.27□□□□□ -0.76
RANBP3-229ENST00000592771 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
RANBP3-229ENST00000592771 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.77
RANBP3-229ENST00000592771 IGHV3-64A0A075B6Q5 118 aa10.26□□□□□ -0.77
RANBP3-229ENST00000592771 RS1O15537 224 aa10.26□□□□□ -0.77
RANBP3-229ENST00000592771 GIG44P09565 113 aaPredicted RBP10.26□□□□□ -0.77
RANBP3-229ENST00000592771 IFITM1P13164 125 aa10.26□□□□□ -0.77
RANBP3-229ENST00000592771 TIRAPP58753 221 aa10.26□□□□□ -0.77
RANBP3-229ENST00000592771 NDUFA12Q9UI09 145 aa10.26□□□□□ -0.77
RANBP3-229ENST00000592771 ANKRD29Q8N6D5 301 aa10.25□□□□□ -0.77
RANBP3-229ENST00000592771 TEP1Q99973 2627 aaKnown RBP10.25□□□□□ -0.77
RANBP3-229ENST00000592771 JMJD1CQ15652 2540 aa10.25□□□□□ -0.77
RANBP3-229ENST00000592771 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
RANBP3-229ENST00000592771 MIAQ16674 131 aa10.25□□□□□ -0.77
RANBP3-229ENST00000592771 ZFAND6Q6FIF0 208 aa10.25□□□□□ -0.77
RANBP3-229ENST00000592771 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
RANBP3-229ENST00000592771 Q1RN00 199 aa10.24□□□□□ -0.77
RANBP3-229ENST00000592771 C9JAW5 83 aa10.23□□□□□ -0.77
RANBP3-229ENST00000592771 LINC01620Q4KN68 170 aa10.23□□□□□ -0.77
RANBP3-229ENST00000592771 Q6ZUT4 128 aa10.23□□□□□ -0.77
RANBP3-229ENST00000592771 GEMIN7Q9H840 131 aaKnown RBP10.23□□□□□ -0.77
RANBP3-229ENST00000592771 PF4P02776 101 aa10.23□□□□□ -0.77
RANBP3-229ENST00000592771 COX6CP09669 75 aa10.23□□□□□ -0.77
RANBP3-229ENST00000592771 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
RANBP3-229ENST00000592771 WFDC10AQ9H1F0 79 aa10.23□□□□□ -0.77
RANBP3-229ENST00000592771 Q6ZSN1 163 aa10.22□□□□□ -0.77
RANBP3-229ENST00000592771 TRAV8-3A0A0A6YYJ7 113 aa10.21□□□□□ -0.77
RANBP3-229ENST00000592771 TRBV10-2A0A0K0K1G8 114 aa10.21□□□□□ -0.77
RANBP3-229ENST00000592771 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.77
RANBP3-229ENST00000592771 CEMP1Q6PRD7 247 aaPredicted RBP10.21□□□□□ -0.77
RANBP3-229ENST00000592771 FAM19A3Q7Z5A8 133 aa10.21□□□□□ -0.77
RANBP3-229ENST00000592771 NDUFA1O15239 70 aa10.21□□□□□ -0.78
RANBP3-229ENST00000592771 PRSS2P07478 247 aa10.21□□□□□ -0.78
RANBP3-229ENST00000592771 NIPBLQ6KC79 2804 aaeCLIP10.21□□□□□ -0.78
RANBP3-229ENST00000592771 CKS1BP61024 79 aa10.2□□□□□ -0.78
RANBP3-229ENST00000592771 CSNK1G2-AS1Q8NCQ2 148 aa10.2□□□□□ -0.78
RANBP3-229ENST00000592771 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
RANBP3-229ENST00000592771 CSDC2Q9Y534 153 aaKnown RBP10.2□□□□□ -0.78
RANBP3-229ENST00000592771 ICOSQ9Y6W8 199 aa10.2□□□□□ -0.78
RANBP3-229ENST00000592771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.19□□□□□ -0.78
RANBP3-229ENST00000592771 IGHV3OR16-12A0A075B7B8 117 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 TRBV10-1A0A0K0K1A3 114 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 IGKV2-29A2NJV5 120 aaPredicted RBP10.19□□□□□ -0.78
RANBP3-229ENST00000592771 H7C2G1 150 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 TRIAP1O43715 76 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 HERVK_113P63121 156 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
RANBP3-229ENST00000592771 H3BT86 120 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 XGP55808 180 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 ADAMTSL4-AS1Q5T5F5 129 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
RANBP3-229ENST00000592771 MT-ATP8P03928 68 aa10.18□□□□□ -0.78
RANBP3-229ENST00000592771 RPL35AP18077 110 aaKnown RBP10.18□□□□□ -0.78
RANBP3-229ENST00000592771 DAZ2Q13117 558 aaKnown RBP10.18□□□□□ -0.78
RANBP3-229ENST00000592771 IGLV5-39A0A0G2JS06 123 aa10.17□□□□□ -0.78
RANBP3-229ENST00000592771 PLAC8L1A1L4L8 177 aa10.17□□□□□ -0.78
RANBP3-229ENST00000592771 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
RANBP3-229ENST00000592771 CITED1Q99966 193 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms